Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,966,116 |
A→C |
intergenic (‑79/+72) |
lgt ← / ← ptsP |
phosphatidylglycerol‑prolipoprotein diacylglyceryl transferase/PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,966,116 | 0 | A | C | 92.5%
| 444.4
/ 16.5
| 148 | intergenic (‑79/+72) | lgt/ptsP | phosphatidylglycerol‑prolipoprotein diacylglyceryl transferase/PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base A (7/4); new base C (65/71); total (73/75) |
| Fisher's exact test for biased strand distribution p-value = 3.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 |
Only 100 of 148 total aligned reads displayed.
GCAGATAGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCAGCCCG > NC_000913/2966019‑2966212
|
gCAGATAGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACgg < 1:3746844/100‑1 (MQ=255)
aGATAGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTg < 2:3674949/100‑1 (MQ=255)
tAGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGa > 2:882670/1‑100 (MQ=255)
aGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGaa < 1:3031546/100‑1 (MQ=255)
gCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGaat < 2:3125938/100‑1 (MQ=255)
cTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAataata > 1:1358065/1‑100 (MQ=255)
cTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAataata > 2:1562962/1‑100 (MQ=255)
cTGGTCATCTGTCACCACAAGTTCTTGTTATTACGGTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGCTTCAGGCGCTCCAACGGTGCGAataata > 2:412610/1‑100 (MQ=255)
tGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAg < 2:3578608/100‑1 (MQ=255)
tGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAg > 2:1877474/1‑100 (MQ=255)
ggTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGc < 1:3531473/100‑1 (MQ=255)
gTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGca > 2:3500806/1‑100 (MQ=255)
tCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGcac < 1:993361/100‑1 (MQ=255)
cATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGcaca > 2:2701115/1‑100 (MQ=255)
tCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAg > 2:2014752/1‑100 (MQ=255)
tCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAg > 2:2914154/1‑100 (MQ=255)
cTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAgg < 2:2420085/100‑1 (MQ=255)
tGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAggg > 2:38281/1‑100 (MQ=255)
gTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAgggg > 2:1103606/1‑100 (MQ=255)
gTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAgggg < 1:901670/100‑1 (MQ=255)
tCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGa > 2:1827624/1‑100 (MQ=255)
tCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGa > 2:3179892/1‑100 (MQ=255)
caccacAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGCTTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCTCAAGGGGAc < 1:3980297/100‑1 (MQ=255)
caccacAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGAc > 1:642379/1‑100 (MQ=255)
caccacAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGAc > 1:540246/1‑100 (MQ=255)
ccacAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACct > 1:2754177/1‑100 (MQ=255)
caAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACctggc < 2:1333662/100‑1 (MQ=255)
aaGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACctggct < 1:1658813/100‑1 (MQ=255)
gTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACctggctgg > 2:2376697/1‑100 (MQ=255)
ttCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGt < 2:1421834/100‑1 (MQ=255)
ttCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGt > 2:1392518/1‑100 (MQ=255)
tCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGtt > 2:28611/1‑100 (MQ=255)
cgtGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTGAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 2:328422/3‑100 (MQ=255)
cTTGTTATTTCGCTGAAAGAGACCAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 2:1564601/1‑100 (MQ=255)
cTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 1:679795/1‑100 (MQ=255)
cTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 2:326914/1‑100 (MQ=255)
cTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 1:4074779/1‑100 (MQ=255)
cTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTCCAGCCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTg > 2:3947633/1‑100 (MQ=255)
gTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCg < 1:1778694/100‑1 (MQ=255)
gTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCg < 1:1340410/100‑1 (MQ=255)
ttATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCgg < 2:2538318/100‑1 (MQ=255)
ttATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCgg < 1:3763714/100‑1 (MQ=255)
ttATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCgg < 2:2069291/100‑1 (MQ=255)
tATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGa > 2:3220743/1‑100 (MQ=255)
aTTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAATGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGAt > 1:2607664/1‑100 (MQ=255)
tttCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATa < 1:346393/100‑1 (MQ=255)
ttCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATAc < 1:2883678/100‑1 (MQ=255)
tCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATAcc < 1:2600377/100‑1 (MQ=255)
cGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCg < 2:1185642/100‑1 (MQ=255)
gCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGt < 2:654259/100‑1 (MQ=255)
gCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGt < 1:351130/100‑1 (MQ=255)
gCTGAAAGAGAACAGCGATCGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGt < 2:3577251/100‑1 (MQ=255)
cTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGtt > 1:136879/1‑100 (MQ=255)
cTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGtt < 1:3222086/100‑1 (MQ=255)
cTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAACACAAGGGGACCTGGCTGGTTGCCGGATACCGtt > 2:2358394/1‑100 (MQ=255)
tGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTa < 1:1785655/100‑1 (MQ=255)
aaaGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTaaa > 1:1133431/1‑100 (MQ=255)
aaaGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGACGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGCTACCGTTaaa < 2:622797/100‑1 (MQ=255)
aaGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTaaaa < 1:2794351/100‑1 (MQ=255)
agagAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAg < 2:2896539/100‑1 (MQ=255)
agagAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAg < 2:665648/100‑1 (MQ=255)
agagAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAg < 2:2304978/100‑1 (MQ=255)
gagctcAGCGATTGAAGTGCGCGCCGCAGGTTTCAGGCGTTCCATCGGTGCGAAGCATAGGACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGa < 2:2222676/95‑1 (MQ=255)
gagaACAGCGATTGAAATGTGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGa > 1:2268457/1‑100 (MQ=255)
aaCAGCGATTGAAATGCGCGCCGCAGGTTTCCGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGatat < 1:3210335/100‑1 (MQ=255)
aaCAGCGAGTGAAATGCGCGCCGCAGGTGTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGatat < 1:1009138/100‑1 (MQ=255)
aCAGCGATTGAAATGCGGGCCGCAGGTTTCAGGCGCTCCAAAGGGGCGAATAATAGCACAAGGGGCCCTGCCTGGGTGCCGGATACCGTGACAGGATATg > 2:2422964/1‑100 (MQ=255)
cAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGGTCCAACGGTGCGAGTAATAGCACACGGGGACCTTGCTGGTTGCCGGCTACCGTGAAAAGacatct > 2:3405401/1‑98 (MQ=255)
cAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGt > 1:710951/1‑100 (MQ=255)
gATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTatat < 1:2990390/100‑1 (MQ=255)
gATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTatat < 2:1013176/100‑1 (MQ=255)
ttGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGa > 1:2406566/1‑100 (MQ=255)
gAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATc < 1:3562073/100‑1 (MQ=255)
gAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATc < 1:1404887/100‑1 (MQ=255)
gAAATGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATc > 2:1753050/1‑100 (MQ=255)
tGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAGAGATATGTATATGATCcgcg < 2:2870941/100‑1 (MQ=255)
tGCGCGCCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCcgcg < 1:1476967/100‑1 (MQ=255)
gcgcgcCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCgcgc < 2:751298/100‑1 (MQ=255)
gcgcCGCAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTAGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCta < 2:3106555/100‑1 (MQ=255)
cgccgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCtat < 1:3911095/100‑1 (MQ=255)
gccgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCtata < 1:2099536/100‑1 (MQ=255)
gccgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCtata > 1:3079993/1‑100 (MQ=255)
gccgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTGAAAAGATATGTATATGATCCGCGCtata > 1:3706826/1‑100 (MQ=255)
gccgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTCACCGGAGACCGTTAAAAGATATGTATATGATCCGCGCtata > 2:3816277/1‑100 (MQ=255)
ccgcAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATaa < 2:2945498/100‑1 (MQ=255)
cgcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAAc < 2:3678996/100‑1 (MQ=255)
gcAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAAcc > 2:266770/1‑100 (MQ=255)
cAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAAccc > 1:4013604/1‑100 (MQ=255)
cAGGTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAAccc > 2:2511695/1‑100 (MQ=255)
ggTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTc > 2:1490727/1‑100 (MQ=255)
ggTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTc > 1:1253212/1‑100 (MQ=255)
ggTTTCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTc > 1:3684442/1‑100 (MQ=255)
tttCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCcg > 2:1371366/1‑100 (MQ=255)
tttCAGGCGCTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCcg > 1:2884282/1‑100 (MQ=255)
cgcTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCa < 1:2159502/100‑1 (MQ=255)
cTCCAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCAgc > 1:1939970/1‑100 (MQ=255)
ccAACGGTGCGAATAATAGCACAAGGGGACCTGGCTTGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAAACCTCCGCGAATCAgccc > 2:1600446/1‑100 (MQ=255)
ccAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCAgccc > 1:2480286/1‑100 (MQ=255)
ccAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCAgccc > 1:3907304/1‑100 (MQ=255)
cAACGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGATAAAAGATATGTACATGATCCGCGCTATAACCCTCCGCGAATCAgcccg > 2:3937123/1‑100 (MQ=255)
|
GCAGATAGCTACTGGTCATCTGTCACCACAAGTTCTTGTTATTTCGCTGAAAGAGAACAGCGATTGAAATGCGCGCCGCAGGTTTCAGGCGCTCCAAAGGTGCGAATAATAGCACAAGGGGACCTGGCTGGTTGCCGGATACCGTTAAAAGATATGTATATGATCCGCGCTATAACCCTCCGCGAATCAGCCCG > NC_000913/2966019‑2966212
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
