Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F380 I3 R1
|
13 |
150.7 |
7817698 |
91.1% |
7121922 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,950,469 |
T→G |
intergenic (+49/‑38) |
ilvL → / → ilvX |
ilvG operon leader peptide/uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,950,469 | 0 | T | G | 99.2%
| 456.3
/ ‑3.4
| 131 | intergenic (+49/‑38) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (64/66); minor base . (1/0); total (65/66) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 142 total aligned reads displayed.
TTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAA > NC_000913/3950374‑3950564
|
tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgtttt < 1:2273685/99‑1 (MQ=255)
ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgtttttt < 1:3001547/99‑1 (MQ=255)
ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgtttttt < 1:2013731/99‑1 (MQ=255)
tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgttttttt < 1:1073361/99‑1 (MQ=255)
tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgttttttt < 1:661252/99‑1 (MQ=255)
tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGgttttttt < 1:3390093/99‑1 (MQ=255)
tCCGACCGTGCGGAGCTGCACTTGGACGTTGAAAAGCTTAGAGATCAAGCCTTAGCGAACTTTGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGa < 2:892922/99‑1 (MQ=255)
tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGa < 1:1460494/99‑1 (MQ=255)
cccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGAc > 1:2824923/1‑99 (MQ=255)
cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCt > 1:1449352/1‑99 (MQ=255)
ccGTGCCGGGCTGCACGTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTa < 2:2034992/99‑1 (MQ=255)
gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaa > 1:2330689/1‑99 (MQ=255)
gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaa < 1:1370537/99‑1 (MQ=255)
tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACNCCCGNACCGAAANGTCCGGGGGGTTTTTTTGACCTTaaaa < 1:2197787/99‑1 (MQ=255)
tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaaa < 1:2022645/99‑1 (MQ=255)
gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaaaa < 2:2521294/99‑1 (MQ=255)
gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaaaa < 1:2524393/99‑1 (MQ=255)
gCGGGGCTGCACTTGGACGAGCAAACGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTaaaaa < 2:3645148/99‑1 (MQ=255)
cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAAc < 1:519374/99‑1 (MQ=255)
gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACAt > 1:1267725/1‑99 (MQ=255)
ggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGGTTTTTTGACCTTAAAAACATa > 1:3906127/1‑99 (MQ=255)
gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATaa < 1:1187336/99‑1 (MQ=255)
gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATaa > 2:655654/1‑99 (MQ=255)
cTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAAc > 1:730270/1‑99 (MQ=255)
tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAAcc > 1:3412680/1‑99 (MQ=255)
aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgag > 1:1071256/1‑99 (MQ=255)
aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgag < 1:1490033/99‑1 (MQ=255)
aCTTGGACGAGGAAAGGCTTAGAGAGCAAGCCTTAACGAACTAAGACCGCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgag < 2:3484394/99‑1 (MQ=255)
aCTTGAACGAGCAAAGGCTTAGAGAGCAAGCCTTAACGAACTAAGACCCCCACACCGACAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgtg > 2:599339/1‑97 (MQ=255)
cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgagg < 1:2061030/99‑1 (MQ=255)
cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgagg < 1:3390451/99‑1 (MQ=255)
ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgagga < 1:1681168/99‑1 (MQ=255)
ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgagga > 1:3491452/1‑99 (MQ=255)
tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgaggag < 1:689799/99‑1 (MQ=255)
tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCgaggag < 1:689715/99‑1 (MQ=255)
gACGAGGAAAGGCTTAGAGCTCAAGCCTTAACGAACTAAGACCCCCGCACCGACAGGTCCTGGGGGGCGTATTGACCTTCACGACATAACCGAGGTGcc > 2:2315632/1‑98 (MQ=255)
aCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg < 2:1350026/99‑1 (MQ=255)
cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa < 1:3860858/99‑1 (MQ=255)
ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACaa > 1:1285668/1‑99 (MQ=255)
ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACaa > 2:328139/1‑99 (MQ=255)
gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt < 2:1057873/99‑1 (MQ=255)
gAAAGGCTAAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCGTAAAAACATAACCGAGGAGCAGACAAt > 1:2735505/1‑99 (MQ=255)
aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa > 1:2592420/1‑99 (MQ=255)
aGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa < 2:1157514/99‑1 (MQ=255)
ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATACCCGAGGAGCAGACAATGAAt < 2:734718/99‑1 (MQ=255)
ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt < 1:1327908/99‑1 (MQ=255)
gCTTAGAGATCAAGCCTTAACGAAGTAAGACCCCCGCACCGAAAGGCCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:3543131/1‑99 (MQ=255)
gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:843344/1‑99 (MQ=255)
gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:1439594/1‑99 (MQ=255)
ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc > 2:1639273/1‑99 (MQ=255)
ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc > 1:1148174/1‑99 (MQ=255)
ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:1741322/99‑1 (MQ=255)
ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc > 2:2888979/1‑99 (MQ=255)
agagATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 2:2663522/1‑99 (MQ=255)
agagATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 2:3112013/1‑99 (MQ=255)
gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc < 1:2661903/99‑1 (MQ=255)
agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGTTCTTATAAACATAACCGAGGAGCAGACAATGAATAACAGca > 2:241289/1‑99 (MQ=255)
agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAAGATACCCGAGGAGCAGACATGTAATAACAGca > 2:3020020/1‑99 (MQ=255)
aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGGAGACAATGAATAACAGcaca > 2:879340/1‑99 (MQ=255)
aaGCCTTAACGAACTAAGAGCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGATCTTAAAATCATAATCGAGGAGCAGACAATGAATAACAGCACaaaa < 1:3520482/99‑1 (MQ=255)
aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt > 1:12976/1‑99 (MQ=255)
ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 1:3767672/1‑99 (MQ=255)
ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGCGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc < 1:3786275/99‑1 (MQ=255)
cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt > 2:849943/1‑99 (MQ=255)
ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 1:3650015/99‑1 (MQ=255)
tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:942725/99‑1 (MQ=255)
tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt > 2:499278/1‑99 (MQ=255)
tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:2964017/99‑1 (MQ=255)
aaCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt > 2:255960/1‑99 (MQ=255)
aaCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGAAGACAATGAATAACAGCACAAAATTCTGtt > 2:731000/1‑99 (MQ=255)
cGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc > 2:1575911/1‑99 (MQ=255)
cGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 2:2119830/99‑1 (MQ=255)
gAACTAATACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct < 2:2764201/99‑1 (MQ=255)
gAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct < 2:1823036/99‑1 (MQ=255)
aCTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa > 1:770020/1‑99 (MQ=255)
cTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATATCAGCACAAAATTCTGTTTCTCaa < 1:1197661/99‑1 (MQ=255)
cTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 1:556945/1‑99 (MQ=255)
tAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg > 2:1691389/1‑99 (MQ=255)
tAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg > 2:429380/1‑99 (MQ=255)
aaGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa < 1:1874160/99‑1 (MQ=255)
aCCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc > 2:791956/1‑99 (MQ=255)
aCCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc < 2:3615554/99‑1 (MQ=255)
aCCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc < 1:792229/99‑1 (MQ=255)
ccccGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAGTTCTGTTTCTCAAGATGCAg < 2:3580824/99‑1 (MQ=255)
ccccGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg < 1:2686725/99‑1 (MQ=255)
ccccGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCCCAAGATTCAg > 1:307735/1‑99 (MQ=255)
cGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc < 2:3417959/99‑1 (MQ=255)
cACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg < 1:1502576/99‑1 (MQ=255)
aCCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGATAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTGAGGACggg > 1:2201959/1‑99 (MQ=255)
aCCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg < 1:2332308/99‑1 (MQ=255)
ccGAAAGGTCCGGGGGGTTTTTTGGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAGTCTGTTTCTCAAGATTCAGGACgggg < 2:2858293/99‑1 (MQ=255)
cGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa > 1:865716/1‑99 (MQ=255)
gTCCGGGGGGCTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac > 1:1978581/1‑99 (MQ=255)
tCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact > 1:3294269/1‑99 (MQ=255)
cGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTAt < 2:708678/99‑1 (MQ=255)
cGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTAt < 1:2123070/99‑1 (MQ=255)
cGGGGGGATTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCCAGATTCAGGACGGGGAACTAACTAt > 2:3511187/1‑99 (MQ=255)
ggggGTTTTTTTGACCTTAAAAACATATCCGAGGTGCAGACAATGAATAACAGCACAAAATTCTGTTTCTTAAGATTCAGGACGGGGAACTAACTATGa < 2:2003717/99‑1 (MQ=255)
ggggGTTTTTTTGACCTTAAAAACATAAACGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTGCTAAAGATTCAGGACGGGAAACTAACTATGa < 2:2751824/99‑1 (MQ=255)
ggggTTTTATTGACCTTAAAAACATAACCGAGGAGTAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGATGGGGAACTAACTATGaa < 2:3242424/99‑1 (MQ=255)
|
TTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAA > NC_000913/3950374‑3950564
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
