Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F236 I1 R1	155	93.2	2393300	97.8%	2340647	180.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,964,727	A→C	F302V (TTT→GTT)	rhlB ←	ATP‑dependent RNA helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,964,727	0	A	C	99.4%	659.1 / NA	173	F302V (TTT→GTT)	rhlB	ATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (91/81); total (92/81)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 173 total aligned reads displayed.

AGTGACCAATATAGGTCTCAATAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAAATTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGTTTTCTGTTC  >  NC_000913/3964499‑3964961

       aaTATAGGTCTCAATAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGCCCGCTTGCGCCTGCGCGATCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           <  1:1187899/239‑1 (MQ=255)

              gTCTCAATAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGCCGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGGAACTTCATCAAGAATAAGCAGACGttt                                                                                                                                                                                                                    >  2:50627/1‑239 (MQ=255)

                   aaTAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           >  2:123826/1‑227 (MQ=255)

                   aaTAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           <  1:123826/227‑1 (MQ=255)

                   aaTAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGttttt                                                                                                                                                                                                                  >  2:324704/1‑236 (MQ=255)

                   aaTAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGAAGttttt                                                                                                                                                                                                                  >  1:964594/1‑236 (MQ=255)

                        cAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGACTACGCCGAAGTTTTTTCTGcgcg                                                                                                                                                                                                          >  2:895923/1‑239 (MQ=255)

                        cAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGcgcg                                                                                                                                                                                                          >  2:70836/1‑239 (MQ=255)

                        cAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGcgcg                                                                                                                                                                                                          >  2:828426/1‑239 (MQ=255)

                          ggCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGAc                                                                                                                                                                                                        >  2:973083/1‑239 (MQ=255)

                               aTTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGCGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATAAGCAGACGTCTTTTCTGCGCGACAttg                                                                                                                                                                                                    >  2:248523/1‑236 (MQ=255)

                                ttCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CCCGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGTGCGACATCg                                                                                                                                                                                                    >  2:643847/1‑237 (MQ=255)

                                       cATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAAt                                                                                                                                                                                           >  2:985252/1‑239 (MQ=255)

                                          aCTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGT‑ATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATaaa                                                                                                                                                                                        >  2:1151730/1‑238 (MQ=255)

                                            tctTCCCACGCCAGGCTGATAGTGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCCCGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAAcc                                                                                                                                                                                      <  1:1075614/239‑1 (MQ=255)

                                            tctTCACACGCCAGGCTGATAGAGTGACCGCTTGCACCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAAcc                                                                                                                                                                                      <  2:856600/239‑1 (MQ=255)

                                               tCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACg                                                                                                                                                                                                                             <  2:572557/197‑1 (MQ=255)

                                               tCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGac                                                                                                                                                                                   >  2:1058330/1‑239 (MQ=255)

                                               tCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTCTTCTGCGCGACATCGCCTGTCAATAAACCGac                                                                                                                                                                                   >  1:827877/1‑239 (MQ=255)

                                                cacaCGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGac                                                                                                                                                                                   >  2:94004/1‑238 (MQ=255)

                                                cacaCGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGac                                                                                                                                                                                   >  1:473306/1‑238 (MQ=255)

                                                      ccAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGcc                                                                                                                                                                                                  >  2:418470/1‑217 (MQ=255)

                                                        aGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGAcc                                                                                                                                                                          >  1:672598/1‑239 (MQ=255)

                                                           cTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGAc                                                                                                                                                                           <  1:290029/235‑1 (MQ=255)

                                                           cTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGAc                                                                                                                                                                           <  1:627462/235‑1 (MQ=255)

                                                               tAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAAcc                                                                                                                                                                                      <  1:858383/220‑1 (MQ=255)

                                                                    tGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGCTTTTTCTGCGCGAAATCGCCTGTCAATAAACCGACACGATGACCACCTGCTGCCAg                                                                                                                                                              >  2:652953/1‑239 (MQ=255)

                                                                      aCCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACAt                                                                                                                                                                                                      <  2:458342/197‑1 (MQ=255)

                                                                      aCCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            >  1:187212/1‑239 (MQ=255)

                                                                          cTTGCGCCTGCGCGACCTGTACGACCCCTCCTTTTCCCGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGC‑ACCACTCCCCCCCCTCTGCACACGCCTAAACTCATCAAGCATCCCAAGAACTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGc                                                                                                                                                         >  1:353998/1‑238 (MQ=255)

                                                                          cTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGc                                                                                                                                                         >  1:1135051/1‑238 (MQ=255)

                                                                           ttGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            <  2:485272/234‑1 (MQ=255)

                                                                           ttGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            <  2:609827/234‑1 (MQ=255)

                                                                            tGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCt                                                                                                                                                                                                 >  1:353948/1‑196 (MQ=255)

                                                                            tGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCt                                                                                                                                                                                                 <  2:353948/196‑1 (MQ=255)

                                                                                           tGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAAc                                                                                                                                       <  2:336941/239‑1 (MQ=255)

                                                                                            gTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACg                                                                                                                                      <  1:717920/239‑1 (MQ=255)

                                                                                              aCGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACgga                                                                                                                                    >  1:458509/1‑238 (MQ=255)

                                                                                                       aCGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGAc                                                                                                                                                                           >  1:404813/1‑191 (MQ=255)

                                                                                                             aaCGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGcc                                                                                                                                                                                                  >  2:463263/1‑162 (MQ=255)

                                                                                                                   aTCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAaataa                                                                                                               >  2:1031721/1‑239 (MQ=255)

                                                                                                                       tCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           >  1:658696/1‑127 (MQ=255)

                                                                                                                        cacaGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           <  2:1088458/126‑1 (MQ=255)

                                                                                                                        cacaGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCa                                                                                                                                                                                                                           >  1:1088458/1‑126 (MQ=255)

                                                                                                                         acaGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CCCGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATc                                                                                                             >  1:855990/1‑235 (MQ=255)

                                                                                                                          caGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGTATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGc                                                                                                           >  1:609991/1‑236 (MQ=255)

                                                                                                                              cATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGctc                                                                                                         <  1:965305/234‑1 (MQ=255)

                                                                                                                              cATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGc                                                                                                           >  2:1140439/1‑232 (MQ=255)

                                                                                                                              cATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCtctgtct                                                                                                    <  1:1058330/239‑1 (MQ=255)

                                                                                                                               aTCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGAGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGCGTTGGCGACAATAATCGCtctg                                                                                                       >  1:578314/1‑235 (MQ=255)

                                                                                                                                 cGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGc                                                                                                 <  2:855990/239‑1 (MQ=255)

                                                                                                                                  gggTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTgg                                                                                                  <  1:284801/237‑1 (MQ=255)

                                                                                                                                      aaaTCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAACCCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCAct                                                                                             <  1:248523/238‑1 (MQ=255)

                                                                                                                                      aaaGCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCAct                                                                                             <  2:649286/238‑1 (MQ=255)

                                                                                                                                       aaTCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCActct                                                                                           >  1:1013687/1‑239 (MQ=255)

                                                                                                                                              gTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTgg                                                                                                                                                          >  2:1178958/1‑169 (MQ=255)

                                                                                                                                              gTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTgg                                                                                                                                                          <  1:1178958/169‑1 (MQ=255)

                                                                                                                                              gTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGATGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGa                                                                                    >  2:481660/1‑239 (MQ=255)

                                                                                                                                                       gTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAAc                                                                                                                                       >  1:1147514/1‑179 (MQ=255)

                                                                                                                                                         gCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATa                                                                                                                                                                                          <  1:843675/126‑1 (MQ=255)

                                                                                                                                                         gCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTgc                                                                         >  1:1032336/1‑239 (MQ=255)

                                                                                                                                                         gCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGGTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGCGGCCCCAGATCTCTTCACAACGATGTTTGGTGTTGGCGAAAATAATCCCTCTGTCTGCCCACTCTTCTCCGATCAGCGTTTgt                                                                         >  1:311328/1‑238 (MQ=255)

                                                                                                                                                          cGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTgca                                                                        >  2:301406/1‑239 (MQ=255)

                                                                                                                                                             ccatGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAAACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTgcagca                                                                     <  1:594142/236‑1 (MQ=255)

                                                                                                                                                                          tGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCGCTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTttc                                                        <  1:94004/239‑1 (MQ=255)

                                                                                                                                                                               aCCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            >  2:195958/1‑134 (MQ=255)

                                                                                                                                                                               aCCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            <  1:195958/134‑1 (MQ=255)

                                                                                                                                                                               aCCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATc                                                                                  <  1:903270/208‑1 (MQ=255)

                                                                                                                                                                                  aCGGGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAg                                                <  1:1127624/239‑1 (MQ=255)

                                                                                                                                                                                  aCGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAg                                                <  2:591095/239‑1 (MQ=255)

                                                                                                                                                                                  aCGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAg                                                <  2:1013687/239‑1 (MQ=255)

                                                                                                                                                                                  aCGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAg                                                <  1:602726/239‑1 (MQ=255)

                                                                                                                                                                                    gcgcgGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGaa                                              <  1:439713/239‑1 (MQ=255)

                                                                                                                                                                                    gcgcgGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGaa                                              >  2:398694/1‑239 (MQ=255)

                                                                                                                                                                                           aaCGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGct                                                                                                          <  1:764751/172‑1 (MQ=255)

                                                                                                                                                                                           aaCGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGct                                                                                                          >  2:764751/1‑172 (MQ=255)

                                                                                                                                                                                                   tGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGctc                                <  1:367580/238‑1 (MQ=255)

                                                                                                                                                                                                   tGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGctc                                <  2:672598/238‑1 (MQ=255)

                                                                                                                                                                                                   tGGCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGctc                                <  2:1106381/238‑1 (MQ=255)

                                                                                                                                                                                                    ggCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAgg                                                                                                                                                             <  2:1098090/112‑1 (MQ=255)

                                                                                                                                                                                                    ggCAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAgg                                                                                                                                                             >  1:1098090/1‑112 (MQ=255)

                                                                                                                                                                                                    ggCAACCAAAATAGCCAGATCGC‑CGCGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCtctt                              <  2:1135051/239‑1 (MQ=255)

                                                                                                                                                                                                      cAACCAGAATATCCAGATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCtcttc                             <  1:478742/238‑1 (MQ=255)

                                                                                                                                                                                                                     gATCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGccc             >  1:416306/1‑239 (MQ=255)

                                                                                                                                                                                                                      aTCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            >  1:685967/1‑95 (MQ=255)

                                                                                                                                                                                                                      aTCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGt                                                                                                                                                            <  2:685967/95‑1 (MQ=255)

                                                                                                                                                                                                                       tCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGa                                                                                                                                                                                    <  1:984675/70‑1 (MQ=255)

                                                                                                                                                                                                                       tCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCa                                                                                                                                                     >  1:223379/1‑101 (MQ=255)

                                                                                                                                                                                                                       tCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCa                                                                                                                                                     <  2:223379/101‑1 (MQ=255)

                                                                                                                                                                                                                       tCGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGc               <  2:910789/235‑1 (MQ=255)

                                                                                                                                                                                                                        cGC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGtt          <  1:328951/239‑1 (MQ=255)

                                                                                                                                                                                                                         gC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGccc             <  1:133678/235‑1 (MQ=255)

                                                                                                                                                                                                                         gC‑CACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGccc             >  2:133678/1‑235 (MQ=255)

                                                                                                                                                                                                                          c‑cACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGttt         >  2:167836/1‑238 (MQ=255)

                                                                                                                                                                                                                            cACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGtttt        <  2:551026/238‑1 (MQ=255)

                                                                                                                                                                                                                            cACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGttt         >  1:551026/1‑237 (MQ=255)

                                                                                                                                                                                                                            cACGGGTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGttt         >  2:477338/1‑237 (MQ=255)

                                                                                                                                                                                                                                 gTAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGttt         >  2:277341/1‑232 (MQ=255)

                                                                                                                                                                                                                                  tAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGTTTTCTGTTc  <  2:951840/238‑1 (MQ=255)

                                                                                                                                                                                                                                  tAACTTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGTTTTCTGTTc  <  1:1011282/238‑1 (MQ=255)

AGTGACCAATATAGGTCTCAATAGCAGGCAAATTCAATGCATACTCTTCACACGCCAGGCTGATAGAGTGACCGCTTGCGCCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGTCATCGGGTAAATCGTAGTTAAAGACGTGCGTCACTGCCGGAATATGCAAACCACGCGCGGCAACGTCGGTGGCAACCAGAATATCCAGATCGC‑CACGGGTAAATTCATCAAGAATACGCAGACGTTTTTTCTGCGCGACATCGCCTGTCAATAAACCGACACGATGACCATCTGCTGCCAGGTGGCCCCAGATCTCTTCACAACGGTGTTTGGTGTTGGCGAAAATAATCGCTCTGTCTGGCCACTCTTCTTCGATCAGCGTTTGCAGCAAACGCATTTTTTCTTCGTTAGAAGGGTAGAAAAGCTCTTCTTTAATACGGTGGCCCGTTTTCTGTTC  >  NC_000913/3964499‑3964961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A