Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,269,918 |
G→A |
intergenic (+316/+298) |
yhaC → / ← rnpB |
pentapetide repeats‑related protein/RNase P, M1 RNA component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,269,918 | 0 | G | A | 98.5%
| 392.5
/ NA
| 130 | intergenic (+316/+298) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (65/62); total (67/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 130 total aligned reads displayed.
GAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCT > NC_000913/3269822‑3270014
|
aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCgn < 1:2096632/100‑2 (MQ=255)
aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGt > 1:1168673/1‑100 (MQ=255)
aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTCTTGGGTATAGTATCGt > 1:834515/1‑100 (MQ=255)
aTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTg < 2:1562514/100‑1 (MQ=255)
aTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTg > 1:70904/1‑100 (MQ=255)
aTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTg < 2:552519/100‑1 (MQ=255)
aTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGGTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTg > 2:319453/1‑100 (MQ=255)
tAAAGGGCACTCAACAACCTGAAACCCGCCGGAACGTTTTAGTACTTACATCTGGTAAAACTGACCTATAGTTCGCTTTCTTTTGGGTATAGTATCGTgg < 2:531297/100‑1 (MQ=25)
aaGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGAc > 2:953408/1‑100 (MQ=255)
aGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACa < 1:17050/100‑1 (MQ=255)
cACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtca > 1:2083970/1‑100 (MQ=255)
cTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcatt > 2:805578/1‑100 (MQ=255)
cTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTCGGGTATAGTATCGTGGACAGtcatt > 1:2460602/1‑100 (MQ=255)
cTCAACAAACTGAAACCCGCCGGAACGGGTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTCTTGTGTGGAGTAGCGTCGACAGtcatt > 2:897715/1‑100 (MQ=18)
tCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcattc < 1:1392/100‑1 (MQ=255)
caacaaTCTGAACCCCGCCGGAGCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcattca < 2:558554/100‑1 (MQ=255)
caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcattca > 2:229567/1‑100 (MQ=255)
aacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcattcat > 2:1287720/1‑100 (MQ=255)
aacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGtcattcat < 2:706167/100‑1 (MQ=255)
acaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCGGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATc > 2:1772110/1‑100 (MQ=255)
aaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCtt > 1:437515/1‑100 (MQ=255)
aTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCttt > 1:475480/1‑100 (MQ=255)
tCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTCTTGGGTATAGTATCGTGGACAGTCATTCATCTTTc < 2:2531312/100‑1 (MQ=255)
tCTGAAACCCGCCGGAACGGCTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTc < 1:2477154/100‑1 (MQ=255)
cTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCt > 1:2274123/1‑100 (MQ=255)
tGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCCTGGACAGTCATTCATCTTTCTg > 2:1557709/1‑100 (MQ=255)
gattcccGCCTGATCGGTTTATTACGTACATCAGGTAAAACTGTCCGATAAGCTGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGc < 2:545517/96‑1 (MQ=17)
aaaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGcc < 1:504365/100‑1 (MQ=255)
aCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGcccc > 2:2159817/1‑100 (MQ=255)
aCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGcccc < 1:2416763/100‑1 (MQ=255)
cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTcc < 2:2218353/100‑1 (MQ=255)
cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTcc > 1:1499979/1‑100 (MQ=255)
cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTcc < 2:2237655/100‑1 (MQ=255)
cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAACCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTcc < 2:2430061/100‑1 (MQ=255)
ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGGCAGTCATTCATCTTTCTGCCCCTCCaa > 2:1806457/1‑100 (MQ=255)
cgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCaga > 2:1782407/1‑98 (MQ=255)
cgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaa > 1:1875597/1‑100 (MQ=255)
ggAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa > 1:1058229/1‑100 (MQ=255)
gAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAg < 1:1691460/100‑1 (MQ=255)
gAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTACCCCTCCAAAAg < 1:2277833/100‑1 (MQ=255)
aaCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGt < 1:117203/100‑1 (MQ=255)
aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTa < 2:47679/100‑1 (MQ=255)
aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTCTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTa > 1:2055674/1‑100 (MQ=255)
cGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaa > 1:1541521/1‑100 (MQ=255)
ggTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaaa < 2:945181/100‑1 (MQ=255)
ggTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaaa > 2:1714141/1‑100 (MQ=255)
ggTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTATGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaaa > 2:2090274/1‑100 (MQ=255)
gTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaaaa > 1:575063/1‑100 (MQ=255)
tttATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTaaaaa > 1:2065705/1‑100 (MQ=255)
attaCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTGCAAAAGTAAAGAcca > 2:484479/1‑99 (MQ=17)
attaCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAAccc > 1:1107335/1‑100 (MQ=255)
taCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACccgc > 1:1553679/1‑100 (MQ=255)
taCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAATCGTGGACAGTCTTTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgc > 2:2557929/1‑100 (MQ=14)
cGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACccgccg > 1:1656665/1‑100 (MQ=255)
tACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGaa > 1:647055/1‑100 (MQ=255)
tACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTGCAAGAGTAAACGCCCGCTGag > 2:382855/1‑99 (MQ=14)
tACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGaa > 2:2342580/1‑100 (MQ=255)
aTCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCg > 1:2149658/1‑100 (MQ=255)
cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCggg > 1:406654/1‑100 (MQ=255)
aGGTAAAACTGAGCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGt > 1:2270857/1‑100 (MQ=255)
aGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGt > 1:961776/1‑100 (MQ=255)
ggTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGtt > 1:814282/1‑100 (MQ=255)
ggTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGtt > 1:674201/1‑100 (MQ=255)
gTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttt < 2:1866159/100‑1 (MQ=255)
aaaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttttt < 2:1233367/100‑1 (MQ=25)
aaaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttttt < 2:2296968/100‑1 (MQ=25)
aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTa < 1:1396747/100‑1 (MQ=18)
aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTAc < 1:563179/100‑1 (MQ=11)
aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTAc < 1:1737678/100‑1 (MQ=11)
aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGGTCTTAc > 2:2254671/1‑100 (MQ=11)
aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTGATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGCTTTTTACg < 2:2492181/100‑1 (MQ=11)
aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTAct < 1:1952651/100‑2 (MQ=11)
aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTAct < 1:1997305/100‑2 (MQ=11)
aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACg < 1:1125108/100‑1 (MQ=21)
cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTActt < 1:943956/100‑3 (MQ=11)
cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTActt < 2:1358684/100‑3 (MQ=11)
gACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaa > 1:1870778/1‑100 (MQ=21)
gACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCCTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTActttt < 2:1986711/100‑5 (MQ=11)
gACCGATAAGCCGCTTTCTTTTGGGTATAGTATCCTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaa > 2:1038687/1‑100 (MQ=16)
aCCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa < 1:1178648/100‑1 (MQ=21)
aCCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa < 2:398522/100‑1 (MQ=21)
tAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAgg < 1:2331790/100‑1 (MQ=255)
tAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAgg > 2:1115791/1‑100 (MQ=255)
aGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTg < 1:851796/100‑1 (MQ=255)
aGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTg < 2:257560/100‑1 (MQ=255)
gCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCACCCCCAAAAGTAAAAACCCGCCGAAGCGGGATTTCAGGTAAAACAGGGGa > 1:1718004/1‑100 (MQ=11)
gCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAc < 2:1041782/100‑1 (MQ=255)
tttctttTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTg > 2:734337/1‑100 (MQ=255)
tttctttTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTg < 1:1244152/100‑1 (MQ=255)
ttttGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCg < 2:246069/100‑1 (MQ=37)
tttGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGa < 2:1713728/100‑1 (MQ=255)
tGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATa < 2:1108783/100‑1 (MQ=255)
tGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATa < 1:664278/100‑1 (MQ=255)
gggTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATaa > 2:314788/1‑100 (MQ=255)
ggTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCCCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAATGACCGATAAg > 1:814304/1‑100 (MQ=255)
ggTATAGTATCGTGGACAGTCATACATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGGGAAACTGACCGATAAg > 2:2177190/1‑100 (MQ=11)
gTATAGTCTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCGGCCGCAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGc > 2:266040/1‑100 (MQ=11)
gTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGc > 2:1554569/1‑100 (MQ=255)
tataGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGcc > 2:2268220/1‑100 (MQ=255)
aGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGct > 1:1110725/1‑100 (MQ=255)
|
GAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCT > NC_000913/3269822‑3270014
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
