Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F236 I1 R1 155 93.2 2393300 97.8% 2340647 180.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,728,925 T→G V149V (GTA→GTC)  xylB ← xylulokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,728,9250TG77.5% 189.1 / 65.5 98V149V (GTA→GTC) xylBxylulokinase
Reads supporting (aligned to +/- strand):  ref base T (11/11);  new base G (40/36);  total (51/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

TCGCCATACCCCACGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCA  >  NC_000913/3728702‑3729160
                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
tCGCCATACCCCACGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTg                                                                                                                                                                                                                               >  1:136196/1‑238 (MQ=255)
 cGCCATTCCCCACGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGa                                                                                                                                                                                                                              <  1:78738/238‑1 (MQ=255)
 cGCCATCCCCCACGCTTTCGCACCTTCAGGTAACAAAGCACCAGTAATTTCGCTGCTTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGa                                                                                                                                                                                                                              <  1:681364/238‑1 (MQ=255)
           cACGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCTAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATAtct                                                                                                                                                                                                                    >  1:504655/1‑238 (MQ=255)
            aCGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGCATATCTcc                                                                                                                                                                                                                  >  1:983776/1‑239 (MQ=255)
                   cGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCAt                                                                                                                                                                                                           >  2:258609/1‑239 (MQ=255)
                   cGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCAt                                                                                                                                                                                                           >  2:954852/1‑239 (MQ=255)
                    gCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATg                                                                                                                                                                                                          <  1:185667/239‑1 (MQ=255)
                                 aCAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCAt                                                                                                                                                                                             <  1:596051/239‑1 (MQ=255)
                                   aaaGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGGCGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCt                                                                                                                                                                                                     <  2:199090/229‑1 (MQ=255)
                                   aaaGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGGCGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCt                                                                                                                                                                                                     >  1:199090/1‑229 (MQ=255)
                                      gCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCTAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATa                                                                                                                                                                                            <  2:504655/235‑1 (MQ=255)
                                       cACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCCTAGCAAt                                                                                                                                                                                       >  2:574230/1‑239 (MQ=255)
                                        aCCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAAtt                                                                                                                                                                                      >  2:743023/1‑239 (MQ=255)
                                            gTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATAtctc                                                                                                                                                                                                                   >  2:722010/1‑206 (MQ=255)
                                            gTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATAtctc                                                                                                                                                                                                                   <  1:722010/206‑1 (MQ=255)
                                            gTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAg                                                                                                                                                                                   >  2:997069/1‑238 (MQ=255)
                                            gTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAg                                                                                                                                                                                   >  1:13643/1‑238 (MQ=255)
                                              aaTTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  <  2:559971/237‑1 (MQ=255)
                                              aaTTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  <  1:621821/237‑1 (MQ=255)
                                              aaTTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  <  1:258609/237‑1 (MQ=255)
                                                    gCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTaa                                                                                                                                                                          >  2:705275/1‑239 (MQ=255)
                                                      tGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTaaa                                                                                                                                                                         >  2:253176/1‑238 (MQ=255)
                                                       gCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATc                                                                                                                                                                       <  2:1192162/239‑1 (MQ=255)
                                                           tCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCgg                                                                                                                                                                    >  2:1113870/1‑238 (MQ=255)
                                                                      gggCCTCTGGTCCAGGAAAAAGTCGAAAGCCTGCAGCATGACGTCACTCCAGTCCCGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGt                                                                                                                                                        <  2:824870/239‑1 (MQ=255)
                                                                       ggCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGtt                                                                                                                                                       >  2:1183119/1‑239 (MQ=255)
                                                                        gCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGtt                                                                                                                                                       >  1:731684/1‑238 (MQ=255)
                                                                          aTCTGGTCACGATATAAGGCGCACGCCGGCAGCATGACGTCACTCCAGGCCCGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGc                                                                                                                                                     <  2:846900/238‑1 (MQ=255)
                                                                                  aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCgg                                                                                                                                                                    >  1:946339/1‑215 (MQ=255)
                                                                                  aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCgg                                                                                                                                                                    <  2:946339/215‑1 (MQ=255)
                                                                                  aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGAtt                                                                                                                                                                                                                                 <  1:334926/154‑1 (MQ=255)
                                                                                  aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGAtt                                                                                                                                                                                                                                 >  2:334926/1‑154 (MQ=255)
                                                                                        tAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCcgcg                                                                                                                                      <  1:705275/239‑1 (MQ=255)
                                                                                         aaGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGa                                                                                                                                     >  2:939587/1‑239 (MQ=255)
                                                                                              gCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCg                                                                                                                                >  1:1101927/1‑239 (MQ=255)
                                                                                                  gCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGa                                                                                                                              >  2:737145/1‑237 (MQ=255)
                                                                                                      gcagcaTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTcgc                                                                                                                        >  2:835737/1‑239 (MQ=255)
                                                                                                          caTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCt                                                                                                                     >  2:802669/1‑238 (MQ=255)
                                                                                                           aTGACGTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTc                                                                                                                   <  1:743023/239‑1 (MQ=255)
                                                                                                            tGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTcc                                                                                                                  >  1:1157234/1‑239 (MQ=255)
                                                                                                                gTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCa                                                                                                              <  1:802669/239‑1 (MQ=255)
                                                                                                                gTCACTCCAGTCACGCTTGGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCa                                                                                                              <  1:282407/239‑1 (MQ=255)
                                                                                                                    cTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGt                                                                                                          >  1:904718/1‑239 (MQ=255)
                                                                                                                     cccATTCACGCTTGTGGACATCCAGCCACATGGTGCCAGTGGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTg                                                                                                         <  2:983776/238‑1 (MQ=255)
                                                                                                                         gTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCAc                                                                                                      >  1:5890/1‑238 (MQ=255)
                                                                                                                               cTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  >  2:294839/1‑156 (MQ=255)
                                                                                                                               cTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  <  1:294839/156‑1 (MQ=255)
                                                                                                                               cTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGaa                                                                                                                             <  2:493267/209‑1 (MQ=255)
                                                                                                                               cTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGaa                                                                                                                             >  1:493267/1‑209 (MQ=255)
                                                                                                                                   gCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCa                                                                                                       <  1:283977/227‑1 (MQ=255)
                                                                                                                                   gCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCa                                                                                                       >  2:283977/1‑227 (MQ=255)
                                                                                                                                   gCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCgcgc                                                                                                                      <  2:643862/212‑1 (MQ=255)
                                                                                                                                   gCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCgcgc                                                                                                                      >  1:643862/1‑212 (MQ=255)
                                                                                                                                   gCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGccca                                                                                           >  2:778646/1‑239 (MQ=255)
                                                                                                                                        aTCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAgcgc                                                                                       >  2:597818/1‑238 (MQ=255)
                                                                                                                                            aGCCCCATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGAtttta                                                                                                                                                                                                                              <  1:932863/99‑3 (MQ=255)
                                                                                                                                            aGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGa                                                                                                                                                                                                                          <  2:538530/103‑1 (MQ=255)
                                                                                                                                            aGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGa                                                                                                                                                                                                                          >  1:538530/1‑103 (MQ=255)
                                                                                                                                                  aTGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTcc                                                                             >  2:1026619/1‑238 (MQ=255)
                                                                                                                                                  aTGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTcc                                                                             >  2:1084050/1‑238 (MQ=255)
                                                                                                                                                  aTGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCca                                                                            <  1:954852/239‑1 (MQ=255)
                                                                                                                                                    ggTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCcaca                                                                          >  2:436743/1‑239 (MQ=255)
                                                                                                                                                      tGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGc                                                                                                                                                     <  2:246538/162‑1 (MQ=255)
                                                                                                                                                      tGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGc                                                                                                                                                     >  1:246538/1‑162 (MQ=255)
                                                                                                                                                             tGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCa                                                                  <  2:1157234/238‑1 (MQ=255)
                                                                                                                                                             tGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAg                                                                 <  1:1113870/239‑1 (MQ=255)
                                                                                                                                                              gCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAgg                                                                <  1:983454/239‑1 (MQ=255)
                                                                                                                                                               cGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAgg                                                                >  1:78484/1‑238 (MQ=255)
                                                                                                                                                                gTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGc                                                              >  1:175491/1‑239 (MQ=255)
                                                                                                                                                                gTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCgg                                                                                                                                                                    >  1:43521/1‑137 (MQ=255)
                                                                                                                                                                gTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCgg                                                                                                                                                                    <  2:43521/137‑1 (MQ=255)
                                                                                                                                                                gTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGt                                                                                                                                                        <  1:1020885/149‑1 (MQ=255)
                                                                                                                                                                gTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGt                                                                                                                                                        >  2:1020885/1‑149 (MQ=255)
                                                                                                                                                                          tCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAac                                                         <  2:731684/234‑1 (MQ=255)
                                                                                                                                                                               ggCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGtt                                                  >  2:103225/1‑236 (MQ=255)
                                                                                                                                                                               ggCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGtt                                                  >  2:974445/1‑236 (MQ=255)
                                                                                                                                                                                      tCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATc                                        <  1:103225/239‑1 (MQ=255)
                                                                                                                                                                                         cccGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAg                                     <  1:102215/239‑1 (MQ=255)
                                                                                                                                                                                         cccGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAg                                     <  2:175491/239‑1 (MQ=255)
                                                                                                                                                                                                tACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  >  2:30934/1‑91 (MQ=255)
                                                                                                                                                                                                tACGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAgg                                                                                                                                                                                  <  1:30934/91‑1 (MQ=255)
                                                                                                                                                                                                 aCGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCCCCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTg                             <  1:289202/239‑1 (MQ=255)
                                                                                                                                                                                                 aCGCAGACGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTg                             <  2:78484/239‑1 (MQ=255)
                                                                                                                                                                                                       aCGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGt                       >  2:1174221/1‑239 (MQ=255)
                                                                                                                                                                                                       aCGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAg                                                                                                                <  2:277405/150‑1 (MQ=255)
                                                                                                                                                                                                       aCGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAg                                                                                                                >  1:277405/1‑150 (MQ=255)
                                                                                                                                                                                                       aCGCAAGTAATCTTTCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGt                       >  2:349917/1‑239 (MQ=255)
                                                                                                                                                                                                        ctcAAGTAGTCTTGCGATAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTcc                         <  2:1005247/234‑1 (MQ=255)
                                                                                                                                                                                                                   tttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCggg                                                                                                                                                                   >  2:461268/1‑87 (MQ=255)
                                                                                                                                                                                                                   tttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCggg                                                                                                                                                                   <  1:461268/87‑1 (MQ=255)
                                                                                                                                                                                                                   tttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAg                                     <  1:1159538/213‑1 (MQ=255)
                                                                                                                                                                                                                   tttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAg                                     >  2:1159538/1‑213 (MQ=255)
                                                                                                                                                                                                                    ttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAg                                                                 <  2:211827/184‑1 (MQ=255)
                                                                                                                                                                                                                    ttCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAg                                                                 >  1:211827/1‑184 (MQ=255)
                                                                                                                                                                                                                     tCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCa         <  2:1023480/239‑1 (MQ=255)
                                                                                                                                                                                                                     tCGGTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCa         <  1:997069/239‑1 (MQ=255)
                                                                                                                                                                                                                       ggTAATAAGACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGACTCCAGCAAGGGTGCTCCGTGCATCTGGCCGGCaaa       >  2:611847/1‑238 (MQ=255)
                                                                                                                                                                                                                            taagaCTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAAGCCGGGCATCATCAGGTTGCCGGTAATCCCCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCa  <  1:1021729/239‑1 (MQ=255)
                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
TCGCCATACCCCACGCTTTCGCAACTTCAGGTAACAAAGCACCAGTAATTTCGCTGCCTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAATATCTCCGGCTCATGCCGCTGAACCCATAGCAATTTAGGCGCAGTAAATCCGGGCATCATCAGGTTGCCGGTAATCACCCGCGATTGCGGAACTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCA  >  NC_000913/3728702‑3729160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A