Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F236 I1 R1 155 93.2 2393300 97.8% 2340647 180.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,923,819 A→C S605S (TCT→TCG)  mnmG ← 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,923,8190AC100.0% 411.9 / NA 106S605S (TCT→TCG) mnmG5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (53/53);  total (53/53)

Only 100 of 106 total aligned reads displayed.

CATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAGGGGCAAACG  >  NC_000913/3923591‑3924051
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                         
caTATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATAcgcg                                                                                                                                                                                                                                 >  1:868721/1‑239 (MQ=255)
        cGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGCTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTgg                                                                                                                                                                                                                         <  2:1129742/239‑1 (MQ=255)
          tAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGcc                                                                                                                                                                                                                       >  1:841759/1‑239 (MQ=255)
            ggCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGc                                                                                                                                                                                                                        >  1:1093701/1‑236 (MQ=255)
            ggCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGc                                                                                                                                                                                                                        <  2:1093701/236‑1 (MQ=255)
            ggCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGa                                                                                                                                                                                                                     >  1:213324/1‑239 (MQ=255)
              cAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATa                                                                                                                                                                                                                   >  1:137303/1‑239 (MQ=255)
                         tttttCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGttt                                                                                                                                                                                                        >  2:25068/1‑239 (MQ=255)
                             tCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTtg                                                                                                                                                                                                       <  1:234159/236‑1 (MQ=255)
                             tCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTtg                                                                                                                                                                                                       >  2:234159/1‑236 (MQ=255)
                                   gATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGtt                                                                                                                                                                                               <  1:391384/238‑1 (MQ=255)
                                              gAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGAt                                                                                                                                                                                   <  1:145856/239‑1 (MQ=255)
                                                       gCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGtt                                                                                                                                                                          <  2:137303/239‑1 (MQ=255)
                                                       gCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGGTTGGGGTCGTTAAGTTTGGCGATCACTTCGtt                                                                                                                                                                          >  2:642179/1‑239 (MQ=255)
                                                             ttCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTGCGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAg                                                                                                                                                                    <  2:630710/239‑1 (MQ=255)
                                                             ttCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAg                                                                                                                                                                    >  1:222925/1‑239 (MQ=255)
                                                                       aGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATAcc                                                                                                                                                          >  1:254944/1‑239 (MQ=255)
                                                                       aGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTG‑TTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGc                                                                                                                                                                                                                             <  2:751549/171‑1 (MQ=255)
                                                                       aGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTG‑TTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGc                                                                                                                                                                                                                             >  1:751549/1‑171 (MQ=255)
                                                                          agagTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         <  1:25068/237‑1 (MQ=255)
                                                                              tttGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGtt                                                                                                                                                                                               <  2:1059514/195‑1 (MQ=255)
                                                                              tttGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGtt                                                                                                                                                                                               >  1:1059514/1‑195 (MQ=255)
                                                                              tttGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGt                                                                                                                                                   >  1:478990/1‑239 (MQ=255)
                                                                               ttgttgAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCgg                                                                                                                                                    <  2:230359/237‑1 (MQ=255)
                                                                                tgttgAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCgg                                                                                                                                                    >  2:452097/1‑236 (MQ=255)
                                                                                tgttgAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCgg                                                                                                                                                    <  1:452097/236‑1 (MQ=255)
                                                                                       agcGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAgtg                                                                                                                                          <  1:627768/237‑1 (MQ=255)
                                                                                            ttaTTACCTGTTCTGGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTcgc                                                                                                                                      <  1:1057250/236‑1 (MQ=255)
                                                                                            tGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTgg                                                                                                                                                                                                                         <  1:366578/155‑1 (MQ=255)
                                                                                            tGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTgg                                                                                                                                                                                                                         >  2:366578/1‑155 (MQ=255)
                                                                                            tGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTcgc                                                                                                                                      <  2:804260/238‑1 (MQ=255)
                                                                                            tGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTcgc                                                                                                                                      <  1:1037494/238‑1 (MQ=255)
                                                                                            tGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTGCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTcgc                                                                                                                                      <  2:477879/238‑1 (MQ=255)
                                                                                             gATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTc                                                                                                                                        <  2:841759/235‑1 (MQ=255)
                                                                                                    tGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCCCTTCGTTTGAAAGACCGGATACCTGGCGGTAATCCAGGGTCGCGGGTAg                                                                                                                                >  2:627768/1‑236 (MQ=255)
                                                                                                      ttCTTGCTGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAAACCAGGTTCGCGGGTAGCAggg                                                                                                                           >  2:46216/1‑239 (MQ=255)
                                                                                                      ttCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         <  1:521100/209‑1 (MQ=255)
                                                                                                      ttCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         >  2:521100/1‑209 (MQ=255)
                                                                                                      ttCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCa                                                                                                                              <  2:681068/236‑1 (MQ=255)
                                                                                                      ttCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCa                                                                                                                              >  1:681068/1‑236 (MQ=255)
                                                                                                            aTGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtc                                                                                                                      >  1:869638/1‑238 (MQ=255)
                                                                                                                      tGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAg                                                                                                           <  2:478990/239‑1 (MQ=255)
                                                                                                                              gggTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGGTCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCttt                                                                                                    >  1:635631/1‑238 (MQ=255)
                                                                                                                                 tGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCg                                                                                                 <  1:46216/238‑1 (MQ=255)
                                                                                                                                  gCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑At                                                                                              <  2:1095232/239‑1 (MQ=255)
                                                                                                                                      aCCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCa                                                                                          >  2:1088770/1‑239 (MQ=255)
                                                                                                                                          ggCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAgg                                                                                                                            <  2:424861/202‑1 (MQ=255)
                                                                                                                                          ggCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAgg                                                                                                                            >  1:424861/1‑202 (MQ=255)
                                                                                                                                          ggCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCa                                                                                          >  1:620612/1‑235 (MQ=255)
                                                                                                                                          ggCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGGGTCGCGGGTTGCAGGGTGTTCTCGTTATGCAGCTGCTTTTCG‑ATCTCATCtt                                                                                      >  1:144819/1‑239 (MQ=255)
                                                                                                                                                 ttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGgcg                                                                               <  2:635631/239‑1 (MQ=255)
                                                                                                                                                  tAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGgcgc                                                                              <  1:1088770/239‑1 (MQ=255)
                                                                                                                                                  tAAGGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGgcgc                                                                              <  1:642179/239‑1 (MQ=255)
                                                                                                                                                   aaTGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGgcgcg                                                                             <  2:863690/239‑1 (MQ=255)
                                                                                                                                                      gCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGACATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGGGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGa                                                                          >  1:716131/1‑239 (MQ=255)
                                                                                                                                                      gCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑a                                                                                               >  2:529308/1‑218 (MQ=255)
                                                                                                                                                      gCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑a                                                                                               <  1:529308/218‑1 (MQ=255)
                                                                                                                                                       cGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGTCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGat                                                                         >  2:632188/1‑239 (MQ=255)
                                                                                                                                                        gTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGata                                                                        <  1:207236/239‑1 (MQ=255)
                                                                                                                                                         ttATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGa                                                                                                                                                              <  2:9702/153‑1 (MQ=255)
                                                                                                                                                         ttATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGa                                                                                                                                                              >  1:9702/1‑153 (MQ=255)
                                                                                                                                                         ttATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGatat                                                                       >  1:7498/1‑239 (MQ=255)
                                                                                                                                                                   cgacgCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCgg                                                                                                                                                    >  2:205206/1‑153 (MQ=255)
                                                                                                                                                                   cgacgCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCgg                                                                                                                                                    <  1:205206/153‑1 (MQ=255)
                                                                                                                                                                      cgCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTAttt                                                          >  1:924032/1‑239 (MQ=255)
                                                                                                                                                                        cagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCg                                                                                                 <  2:192962/199‑1 (MQ=255)
                                                                                                                                                                        cagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCg                                                                                                 >  1:192962/1‑199 (MQ=255)
                                                                                                                                                                         agcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGc                                                                                                                                                                                                              <  2:911964/89‑1 (MQ=255)
                                                                                                                                                                           caTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTaa                                                        >  1:233135/1‑236 (MQ=255)
                                                                                                                                                                            atccccTGTTTTGTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTAtt                                                           <  1:12454/229‑1 (MQ=255)
                                                                                                                                                                            aTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGTCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCt                                                     <  1:632188/238‑1 (MQ=255)
                                                                                                                                                                            aTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAAcc                                                      <  2:869638/237‑1 (MQ=255)
                                                                                                                                                                            aTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCt                                                     <  2:213324/238‑1 (MQ=255)
                                                                                                                                                                            aTACCCTGTTTTTTCAGCAACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCt                                                     <  1:594399/238‑1 (MQ=255)
                                                                                                                                                                             tACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCCCATCTTGCTGGGCGGCGGAGTAACCTTCGTTCTTAAcatta                                                   >  2:12454/1‑235 (MQ=255)
                                                                                                                                                                                ccTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTAtt                                                           >  2:155947/1‑228 (MQ=255)
                                                                                                                                                                                ccTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTAtt                                                           <  1:155947/228‑1 (MQ=255)
                                                                                                                                                                                ccTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTaa                                                        >  1:237232/1‑231 (MQ=255)
                                                                                                                                                                                ccTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTaa                                                        >  1:410473/1‑231 (MQ=255)
                                                                                                                                                                                 cTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAAc                                                       <  2:410473/231‑1 (MQ=255)
                                                                                                                                                                                   gTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGGAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTTGCGGGCGATATAAACTTCGGATTTAACCTGAATATCa                                             >  2:499891/1‑239 (MQ=255)
                                                                                                                                                                                     tttttCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         <  2:552070/130‑1 (MQ=255)
                                                                                                                                                                                     tttttCAGCCACACCAGCAAAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATATAGGCTGGGTTGTAAACGCTAAGTTTGGCGAACACTTTGTTAGAAAGACCGGATACCTGGCGGGAATCCAGTGTCCCGGGTAGCATGGGGTTCTCGTTACGCGACTGCTTTTCGAATCT‑ATCTTGCTTGCGCGCGATTTAAACTTCGGAGTTAACCTGAATCTCaa                                            >  2:652497/1‑238 (MQ=255)
                                                                                                                                                                                         tCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCaa                                            >  1:1158504/1‑234 (MQ=255)
                                                                                                                                                                                            gCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         >  1:270267/1‑123 (MQ=255)
                                                                                                                                                                                            gCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt                                                                                                                                                         <  2:270267/123‑1 (MQ=255)
                                                                                                                                                                                              cacaCCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTccgc                                  <  2:1158504/239‑1 (MQ=255)
                                                                                                                                                                                                 acCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCcgccgc                               <  2:867693/239‑1 (MQ=255)
                                                                                                                                                                                                       agAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAgg                                                                                                                                                                                                               <  2:74265/58‑1 (MQ=255)
                                                                                                                                                                                                       agAATGGAGATGGCCGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAgg                                                                                                                                                                                                               >  1:74265/1‑58 (MQ=255)
                                                                                                                                                                                                                     cGCAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAg           >  1:60445/1‑239 (MQ=255)
                                                                                                                                                                                                                       cAGGCGTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGGTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAggg         >  1:1116899/1‑239 (MQ=255)
                                                                                                                                                                                                                            gTGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAATTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTATTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAGGGGCaaa    <  2:521389/239‑1 (MQ=255)
                                                                                                                                                                                                                            gTGACGCCCGAAAGACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAGGGGCaaa    <  2:734460/239‑1 (MQ=255)
                                                                                                                                                                                                                             tGACGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAGGGGCAAAc   >  2:464717/1‑239 (MQ=255)
                                                                                                                                                                                                                               aCGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCg                                                                                                                                                                            <  1:449474/69‑1 (MQ=255)
                                                                                                                                                                                                                               aCGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCg                                                                                                                                                                            >  2:449474/1‑69 (MQ=255)
                                                                                                                                                                                                                               aCGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGatat                                                                       <  1:48196/169‑1 (MQ=255)
                                                                                                                                                                                                                               aCGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGatat                                                                       >  2:48196/1‑169 (MQ=255)
                                                                                                                                                                                                                               aCGCCCGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCCCCGCCTGTTTGTCTGTCAACGCAGGGGCaaaag  >  1:893841/1‑236 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                         
CATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCG‑ATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGCCTGTTCGTCTGTCAACGCAGGGGCAAACG  >  NC_000913/3923591‑3924051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A