Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F64 I0 R1
|
19 |
139.0 |
6703000 |
96.6% |
6475098 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC JC |
NC_000913 |
3,410,998 |
IS2 (+) +5 bp |
100% |
coding (719‑723/966 nt) |
dusB → |
tRNA‑dihydrouridine synthase B |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3186096 = | NA (NA) | 139 (1.120) |
90/178 |
NT |
98.5% |
noncoding (1/1331 nt) |
IS2 |
repeat region |
| ? | NC_000913 |
= 3411002 |
2 (0.020) | coding (723/966 nt) |
dusB |
tRNA‑dihydrouridine synthase B |
| * |
? |
NC_000913 |
= 3187426 | NA (NA) | 139 (1.120) |
95/178 |
NT |
98.5% |
noncoding (1331/1331 nt) |
IS2 |
repeat region |
| ? | NC_000913 |
3410998 = |
2 (0.020) | coding (719/966 nt) |
dusB |
tRNA‑dihydrouridine synthase B |
Only 100 of 157 total aligned reads displayed.
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3186194‑3186096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC < NC_000913/3411002‑3410904
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC < 2:702085/100‑1
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC > 2:2179908/1‑100
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTAAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC > 2:1954744/1‑100
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA < 1:2815977/100‑1
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA > 2:2027897/1‑100
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA > 1:1438873/1‑100
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA > 2:1789880/1‑100
atcagtTGTTCTCCGATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGGCTGGAGATTCAGGGGGCCAGTCTACAGA < 1:3163970/94‑1
ATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGA < 1:822344/100‑1
tccgatcTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGTAGATTCAGGGGGCCAGTCTACAGATA < 1:557669/93‑1
TGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGC > 1:788873/1‑100
TGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTATGGAGATTCAGGGGGCCAGTCTACAGATAATGC > 1:416227/1‑100
TCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGG < 2:890721/100‑1
TCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGG > 1:371277/1‑100
TCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGG > 2:3305913/1‑100
TCTCCAATGACTAGTCTAAAAACTAGGATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGC < 1:1750758/97‑1
CTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGA > 2:2099698/1‑100
CTCAAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAAaatcgga > 2:557669/1‑93
TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTATGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGAT > 2:1611072/1‑100
CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTACGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGAGAATGCTGGATT < 1:1718965/100‑1
CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATT > 2:1347427/1‑100
CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTT > 1:979208/1‑100
GACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCG < 2:2828769/100‑1
GACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCG > 1:351115/1‑100
ACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCAAGTCTACAGATAATGCTGGATTTCCCGA > 2:481665/1‑100
CTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGTCCAGTCTACAGATAATGCTGGATTTCCCGAA > 1:2322998/1‑100
CTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGA < 1:3223260/99‑1
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 2:2008960/1‑100
CTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATC > 1:1108778/1‑100
CTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATC < 1:1931205/100‑1
CTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATC > 1:2123026/1‑100
AAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTATGTAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATTCA > 1:2172563/1‑100
AAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAG < 1:1818499/100‑1
AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGG < 1:3287590/100‑1
CTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTC < 2:742337/100‑1
AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTT < 2:2373388/100‑1
GTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTC > 2:1128306/1‑100
TATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCC > 1:2286698/1‑100
ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGTGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCC > 1:1582529/1‑100
ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTATAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCC < 2:1052993/100‑1
accaaTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA > 1:1516961/6‑100
accaaTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA > 2:1391583/6‑100
AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGTGGGCCAGTCTACACATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA < 1:243894/100‑1
AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA < 1:2852852/100‑1
AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA < 2:2985249/100‑1
AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGA < 1:2852886/100‑1
ccaaTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAG > 2:363925/5‑100
AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAG < 2:1209679/100‑1
GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGC < 1:1706659/100‑1
ACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCT < 1:640180/100‑1
ACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCT > 1:1746294/1‑100
aTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTCCCCGAAAGATCCAGGGTCTTCCCTGAGCTG > 2:1588593/2‑100
ATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGtg > 1:1300878/1‑98
CACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCG > 1:1245755/1‑100
CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGC > 2:180298/1‑100
TTATTTAAGTGATATTGGTTGTCTGGAGATTCTGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCC < 2:848861/100‑1
TATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCT < 1:2330070/100‑1
ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTA > 1:587871/1‑100
ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTA > 2:322188/1‑100
tagGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATC < 1:1325948/96‑1
TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCA > 2:2715485/1‑100
TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCA < 1:1347423/100‑1
AAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCAT > 2:1486408/1‑100
AAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCGATCAT > 2:2076162/1‑100
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 2:2623902/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 2:826525/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 2:1744497/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 1:314584/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 1:2077347/100‑1
ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCA > 2:2111327/1‑100
ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCA > 2:348180/1‑100
GTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCG > 1:244877/1‑100
GTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCG > 1:261437/1‑100
GTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCC < 2:2645934/100‑1
TCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCC < 1:2747134/100‑1
TCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCC < 2:1973693/100‑1
CTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCT > 2:556803/1‑100
TGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTG > 2:1057749/1‑100
GGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGT > 1:1035585/1‑100
GGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGT > 2:2248905/1‑100
GATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATA < 2:2843835/100‑1
ATTCAGGGTGCCAGTCTACAGATAATGCTGTATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAG < 1:278249/100‑1
ATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAG > 2:1568583/1‑100
taCAGGGGGCCAGACTACAGATAATGCTGGATTTCCCGAAAGCTCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGT > 2:2267980/3‑100
TTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGT < 1:180297/100‑1
TTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGT > 2:210982/1‑100
CAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCG < 1:2715462/100‑1
CAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCG > 1:525410/1‑100
GGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAG > 1:921875/1‑100
GGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAG > 1:1009732/1‑100
GGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGC < 1:1128303/100‑1
GGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCAC < 2:541519/100‑1
GCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACA < 2:396738/100‑1
CCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAG > 2:2154360/1‑100
CCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAG < 1:387282/100‑1
GTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTC > 2:2072932/1‑100
CTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTG > 1:2163658/1‑100
CTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTG < 1:3316991/100‑1
TACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGG > 2:1874702/1‑100
ACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC < 2:369924/100‑1
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3186194‑3186096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC < NC_000913/3411002‑3410904
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
