Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F64 I1 R1
|
17 |
68.2 |
3417408 |
93.4% |
3191859 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
3,410,998 |
IS2 (+) +5 bp |
coding (719‑723/966 nt) |
dusB → |
tRNA‑dihydrouridine synthase B |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3186096 = | NA (NA) | 83 (1.220) |
48/198 |
0.1 |
100% |
noncoding (1/1331 nt) |
IS2 |
repeat region |
| ? | NC_000913 |
= 3411002 |
0 (0.000) | coding (723/966 nt) |
dusB |
tRNA‑dihydrouridine synthase B |
| * |
? |
NC_000913 |
= 3187426 | NA (NA) | 71 (1.050) |
39/198 |
0.4 |
100% |
noncoding (1331/1331 nt) |
IS2 |
repeat region |
| ? | NC_000913 |
3410998 = |
0 (0.000) | coding (719/966 nt) |
dusB |
tRNA‑dihydrouridine synthase B |
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3186194‑3186096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC < NC_000913/3411002‑3410904
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC > 1:207104/1‑100
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC > 2:207104/1‑100
AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTTGTGGTCTGGAGATTCAGGGGGCCAGTCTACAG > 2:1399262/1‑100
AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA < 1:208691/99‑1
AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACA < 2:208691/99‑1
TCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGACAGTCTACAGAT < 2:1680673/100‑1
ATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAA > 1:282914/1‑100
ATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAA > 2:282914/1‑100
TCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGG > 2:2158170/1‑100
TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGAT < 2:829128/100‑1
TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGAT > 1:67319/1‑100
TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGAT > 2:67319/1‑100
TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGAT < 1:829128/100‑1
ATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCC < 2:1677787/100‑1
ATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCC < 2:993956/100‑1
TGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCC > 1:767956/1‑100
TGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCC > 2:767956/1‑100
TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGTCAGTCTACAGATAATGCTGGATTTCCCGAta < 2:1725181/100‑3
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 2:1374669/1‑100
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 2:93643/1‑100
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 1:479577/1‑100
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 2:2113450/1‑100
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 1:93643/1‑100
AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAG > 2:479577/1‑100
TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGAT < 1:654261/100‑1
TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGAT < 2:654261/100‑1
CTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATC > 2:1577380/1‑100
TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCC > 2:1054873/1‑100
AAAGACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGGCTACAGATAATGCTGGATTTCCCGAAAGATCCA < 2:844217/100‑1
AAAGACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGGCTACAGATAATGCTGGATTTCCCGAAAGATCCA < 1:844217/100‑1
AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGG < 2:2566194/100‑1
AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGG < 2:1802260/100‑1
AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGG < 1:763542/100‑1
AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGG < 2:763542/100‑1
CTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTC > 2:1745712/1‑100
AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTT > 2:2395897/1‑100
AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTT > 2:1921690/1‑100
TATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTC < 2:2015375/99‑1
ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCC > 2:502147/1‑100
ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCC > 1:502147/1‑100
AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAG < 2:1063792/100‑1
GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGC < 2:1226217/100‑1
GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGC < 2:1834326/100‑1
CTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTG > 2:866837/1‑100
CACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCG < 2:2066171/100‑1
ACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGG > 2:2433907/1‑100
TTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCC < 1:720299/100‑1
TTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCC < 2:720299/100‑1
TTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTAT < 2:1339434/100‑1
TTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATC < 1:309228/100‑1
TTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATC < 2:309228/100‑1
TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCA > 2:1675250/1‑100
AAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCAT < 2:2263330/100‑1
GTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCA > 2:2365960/1‑100
GATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGG < 2:1256974/100‑1
GATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGG < 2:1477083/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 2:1990366/100‑1
ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGG < 2:1308086/100‑1
TATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGC < 2:12637/100‑1
TATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGC < 1:12637/100‑1
TTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCAT < 1:286296/100‑1
TTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCAT < 2:286296/100‑1
TTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCAT < 2:1017047/100‑1
GTTGTCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCG > 2:2214443/1‑100
TCTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTCCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCC < 2:1965158/100‑1
CTGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCT > 2:2503691/1‑100
TGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTG < 2:239368/100‑1
TGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTG < 1:239368/100‑1
TGGAGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTG < 2:1296335/100‑1
AGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTAT < 1:779779/100‑1
AGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTAT < 2:2067509/100‑1
AGATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTAT < 2:779779/100‑1
GATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATA > 2:1833258/1‑100
ATTCAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAG < 2:1248549/100‑1
CAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCG < 2:1519636/100‑1
CAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCG > 2:1776149/1‑100
CAGGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCG < 2:1932792/100‑1
GGGGGCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAG > 2:2114232/1‑100
GCCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACA > 2:2304611/1‑100
CCAGTCTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAG > 2:1636739/1‑100
CTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTG > 2:81539/1‑100
CTACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTG > 1:81539/1‑100
ACAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC > 2:1942304/1‑100
TCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3186194‑3186096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATAATGCTGGATTTCCCGAAAGATCCAGGGTCTTCCCTGAGCTGCGCGGCCTATCATCAGGGCATCCGCCCCTGTATAGTCGAGCACAGCTCTGGC < NC_000913/3411002‑3410904
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
