Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I0 R1
|
252 |
171.1 |
8397611 |
93.1% |
7818175 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,059,704 |
A→T |
20.5% |
intergenic (‑3/‑49) |
yqfE ← / → argP |
pseudogene, LysR family/transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,059,704 | 0 | A | T | 20.5%
| 398.2
/ 105.7
| 191 | intergenic (‑3/‑49) | yqfE/argP | pseudogene, LysR family/transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor |
| Reads supporting (aligned to +/- strand): ref base A (77/74); new base T (19/20); total (96/95) |
| Fisher's exact test for biased strand distribution p-value = 8.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.02e-01 |
Only 100 of 195 total aligned reads displayed.
AATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATACG > NC_000913/3059605‑3059802
|
aaTGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACaaaa < 1:100144/100‑1 (MQ=255)
aTGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAAt < 2:1405345/100‑1 (MQ=255)
gCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtg < 1:298903/100‑1 (MQ=255)
cATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtgt > 2:3737520/1‑100 (MQ=255)
cATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtgt > 2:3256310/1‑100 (MQ=255)
aTTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtgtg < 1:2682861/100‑1 (MQ=255)
aTTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtgtg < 1:4133173/100‑1 (MQ=255)
aTTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATtgtg < 2:2261177/100‑1 (MQ=255)
ttAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCTCGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTgtgt < 1:3987269/100‑1 (MQ=255)
tAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTc < 1:262933/100‑1 (MQ=255)
gcgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCag < 1:1992973/100‑2 (MQ=255)
gcgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCag < 1:1225215/100‑2 (MQ=255)
gcgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCAt > 2:2360903/1‑100 (MQ=255)
gcgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCAt < 2:817705/100‑1 (MQ=255)
ctcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCagg < 2:3226309/98‑3 (MQ=255)
cgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGTATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCagg < 2:957875/100‑3 (MQ=255)
cgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGTTTCGGTATATGCAACCTGACACAATTTTGTGTCagg < 1:2962812/100‑3 (MQ=255)
cgcAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATa > 1:1671313/1‑100 (MQ=255)
cAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTgtgtaaggag > 1:1029713/1‑94 (MQ=255)
cAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCaggtt < 2:1100196/100‑5 (MQ=255)
cAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCaggag > 1:3226323/1‑96 (MQ=255)
aaaTCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAATTTTGTGTCaggt < 2:2532207/98‑4 (MQ=255)
aTCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCa < 2:307835/100‑1 (MQ=255)
cccTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAgg > 2:646705/1‑100 (MQ=255)
cccTGATCTTTTAAGCTGCGCTTTTAACCACGGAGAGAAATGTTACGCGCCGACGGCTTCGGTATATGCAAACTGACACAAAATTGTGTCATAGTGCAgg > 2:1055838/1‑100 (MQ=255)
ccTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGa < 2:1902941/100‑1 (MQ=255)
ccTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGa > 2:1951385/1‑100 (MQ=255)
gATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGaaaa > 1:2189541/1‑100 (MQ=255)
gATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGaaaa > 2:3819764/1‑100 (MQ=255)
tCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAg < 2:1827002/100‑1 (MQ=255)
tCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAg < 1:472760/100‑1 (MQ=255)
tCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAg < 1:2277836/100‑1 (MQ=255)
cTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGc > 1:591535/1‑100 (MQ=255)
cTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATCGTGTCATAGTGCAGGAAAAAGc > 2:2019710/1‑100 (MQ=255)
ttAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCAtt < 2:917366/100‑1 (MQ=255)
tAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCAttt > 1:3043832/1‑100 (MQ=255)
tAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCAttt > 1:512227/1‑100 (MQ=255)
aaGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTa < 1:3167111/100‑1 (MQ=255)
cTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCa < 1:3738436/100‑1 (MQ=255)
tGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAg < 2:1640891/100‑1 (MQ=255)
tGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGAAAAAAAAAAAAAAAAAGCATTTACCAg < 2:4132712/100‑1 (MQ=255)
gcgcTTTTACCCACGGATACAAATGTTCCCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGTAAAAAGCATTTACCAgg < 2:1357128/100‑1 (MQ=255)
gcgcTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAgg > 2:2737753/1‑100 (MQ=255)
cTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGc > 1:1745868/1‑100 (MQ=255)
cTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGc > 1:2885276/1‑100 (MQ=255)
cTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGc < 1:2590913/100‑1 (MQ=255)
tttAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGc < 1:1271728/98‑1 (MQ=255)
tAACGACGGATACAAATGTTGCCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTATAAAAAAAAAAAAAAAAGCATTTACCAGGAGCAGac < 2:2780685/100‑1 (MQ=255)
tAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATCTGCAACCTGACACACAATAGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAg > 2:2327832/1‑98 (MQ=255)
aCCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGacaa > 1:959782/1‑100 (MQ=255)
ccACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGacaac > 2:2702752/1‑100 (MQ=255)
ccACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGacaac > 1:2620184/1‑100 (MQ=255)
cGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGc > 1:1493617/1‑100 (MQ=255)
ggATACAAATGTTACTCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCa < 1:4137194/100‑1 (MQ=255)
cAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGaa < 2:3145329/100‑1 (MQ=255)
cAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGaa > 1:2532603/1‑100 (MQ=255)
cAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCAGTTACCAGGAGGCGACAACAGCAATGaa > 2:1232119/1‑100 (MQ=255)
aaaTGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGaaa < 1:1144858/100‑1 (MQ=255)
aaaTGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCAAAAAAAAAAAAAAAGCATTTACCAGGAGCAGACAACAGCAATGaaa < 2:2112394/100‑1 (MQ=255)
tGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACg < 1:2732494/99‑1 (MQ=255)
gTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGcc > 2:3473802/1‑100 (MQ=255)
aCCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCgg < 2:1555365/100‑1 (MQ=255)
cccGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGa > 1:3352693/1‑100 (MQ=255)
ccgccgACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGAc < 2:313122/100‑1 (MQ=255)
ccgccgACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGAc > 1:659298/1‑100 (MQ=255)
cgACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACa < 2:1760536/100‑1 (MQ=255)
gCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACa > 1:162455/1‑100 (MQ=255)
tCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTa > 1:3689049/1‑100 (MQ=255)
ggTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGTCAACAGCAATGAAACGCCCGGACTACAGAACATTACa < 2:2234426/100‑1 (MQ=255)
ggTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACa > 1:2238731/1‑100 (MQ=255)
ggTATATGCAACCTGACACAAAATTGTGTCATAGTGCAAGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACa < 2:1694794/100‑1 (MQ=255)
ggTATATGCAACCCGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACa > 1:4097083/1‑100 (MQ=255)
gTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAg < 2:696508/100‑1 (MQ=255)
gTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAg < 2:39647/100‑1 (MQ=255)
tcctgcactatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGc > 1:3577434/11‑100 (MQ=38)
tatGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCa > 2:4113992/1‑100 (MQ=255)
tatGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCa > 1:3695004/1‑100 (MQ=255)
cctgcactatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCa > 2:603139/10‑100 (MQ=38)
tgcactatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACt > 1:2424871/8‑100 (MQ=255)
tGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACt < 2:2610644/100‑1 (MQ=255)
cactatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACTAGGAGCAGACAACAGCAATGAAACGACCGAACTAAAGAACATTACAGGCACggg > 2:4196597/6‑100 (MQ=255)
actatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTg > 2:1932420/5‑98 (MQ=255)
actatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGAACTGGa > 2:1030275/5‑100 (MQ=255)
aaCCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGa < 2:1465114/100‑1 (MQ=255)
ctatGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGa > 1:2679398/4‑99 (MQ=255)
ctaacacAAAATTGTGTCATAGTGGAGGAAAAAGCATTTACCAGGAGCAGACAACAGCGATGAAACGCCCGGACTACATAACATTACAGGCACTGGATGc < 2:276305/97‑1 (MQ=255)
cTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGc < 2:1493614/100‑1 (MQ=255)
atGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGc > 1:3119733/2‑100 (MQ=255)
atGACACAATTTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGc > 1:474380/2‑100 (MQ=255)
gACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCgg > 2:3442329/1‑100 (MQ=255)
gACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCgg > 1:4068476/1‑100 (MQ=255)
tctcaAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGt < 2:2403018/97‑1 (MQ=255)
cacaAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTg > 1:3469766/1‑100 (MQ=255)
cacaAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTg > 1:3741816/1‑100 (MQ=255)
acaAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGCTGa > 2:1261110/1‑100 (MQ=255)
caAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGtaga > 1:2403023/1‑97 (MQ=255)
caAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGAt > 1:1378475/1‑100 (MQ=255)
aaaaTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATa < 1:801391/100‑1 (MQ=255)
aaaTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATa < 2:3658576/99‑1 (MQ=255)
aaTTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATACg > 2:3182715/1‑100 (MQ=255)
|
AATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTATATGCAACCTGACACAAAATTGTGTCATAGTGCAGGAAAAAGCATTTACCAGGAGCAGACAACAGCAATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATACG > NC_000913/3059605‑3059802
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
