Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F78 I0 R1
|
34 |
149.3 |
7471746 |
92.4% |
6903893 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
932,304 |
C→T |
100% |
intergenic (‑254/‑291) |
trxB ← / → lrp |
thioredoxin reductase, FAD/NAD(P)‑binding/leucine‑responsive global transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 932,304 | 0 | C | T | 93.4%
| 338.6
/ 8.9
| 116 | intergenic (‑254/‑291) | trxB/lrp | thioredoxin reductase, FAD/NAD(P)‑binding/leucine‑responsive global transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (4/4); new base T (49/59); total (53/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 116 total aligned reads displayed.
TTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAA > NC_000913/932206‑932399
|
ttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCt < 2:1705773/100‑1 (MQ=255)
tCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTg < 2:3541880/100‑1 (MQ=255)
cccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTgg < 1:2660395/100‑1 (MQ=255)
cccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTgg > 2:1381200/1‑100 (MQ=255)
ccGCATTATAAGCCGATTAAATGATGAATAAACGCCCTTGTTAATGATTATCTGGAAAAAAAAAAAAAAAATCGATGTTTTGCTTTGACAATCCCTTgg < 1:1729661/99‑1 (MQ=255)
gCTTTATAAGTCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAGAATCGATGTTTTGCTTTGACAATCCCTTGgtgt < 1:2454745/100‑1 (MQ=255)
tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGttt > 2:3375746/1‑100 (MQ=255)
ttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGtttt > 2:3693959/1‑100 (MQ=255)
tataAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTg > 2:2173415/1‑100 (MQ=255)
ataAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGc < 1:3219739/100‑1 (MQ=255)
ataAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGc < 2:2720871/100‑1 (MQ=255)
ataAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGc < 1:3364836/100‑1 (MQ=255)
taAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCg < 2:656073/100‑1 (MQ=255)
taAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCg < 1:1120443/100‑1 (MQ=255)
aGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGaa < 1:3568654/100‑1 (MQ=255)
gCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGaaa < 1:228786/100‑1 (MQ=255)
gCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGaaa > 2:2306203/1‑100 (MQ=255)
gCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGaaa < 2:3400109/100‑1 (MQ=255)
ccGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGaaaa < 2:1465542/100‑1 (MQ=255)
ccGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGaaaa < 1:37810/100‑1 (MQ=255)
cGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAAc > 2:2030053/1‑100 (MQ=255)
gATGAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACa < 1:1855521/100‑1 (MQ=255)
aTTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACAt > 2:642807/1‑100 (MQ=255)
aaaTGGTGAATAAACGCTCCTGTTAATGAATATCTTGCATGTTGTACTAAAAGTCGCTGTTTTGCTTTGACAATCCTTTGTTGTTTTGCgg > 1:2422684/1‑90 (MQ=255)
aaaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCg < 2:3398633/100‑1 (MQ=255)
aaaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCg < 1:928338/100‑1 (MQ=255)
atgatgAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAg > 1:2362725/1‑100 (MQ=255)
tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAgg < 2:1434399/100‑1 (MQ=255)
tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTATTGCGAAAACATTCGAgg > 1:2556473/1‑100 (MQ=255)
gatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGga > 1:60316/1‑100 (MQ=255)
atgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGgaa > 2:2876006/1‑100 (MQ=255)
atgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGgaa > 1:1266205/1‑100 (MQ=255)
tgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGgaag < 2:810226/100‑1 (MQ=255)
gaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGgaaga < 1:1728862/100‑1 (MQ=255)
aTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGaaa > 2:3047246/1‑100 (MQ=255)
aTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCACTTGGTGTTTTGCGAAAACATTCGAGGAAGaaa > 2:596528/1‑100 (MQ=255)
aaCGCCCCTGTTAATGAATATCTGACATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaa > 1:630527/1‑99 (MQ=255)
ccccTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGAGGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACa < 2:1332927/100‑1 (MQ=255)
ccTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGTGGAAGAAAAAAAACA‑Gt > 2:1122662/1‑100 (MQ=255)
cTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTa > 1:2084944/1‑100 (MQ=255)
tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTAt > 2:2381923/1‑100 (MQ=255)
ttAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTc > 2:3064083/1‑100 (MQ=255)
aaTGAATCTCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCtt > 2:1969414/1‑100 (MQ=255)
aaTGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCtt > 2:3429073/1‑100 (MQ=255)
aaTGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCtt > 2:2934851/1‑100 (MQ=255)
aTGAATATCTGGCATTTTGTACTAAAAATAGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTta < 1:274134/100‑1 (MQ=255)
aTGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTta < 2:3090909/100‑1 (MQ=255)
aTGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTta < 2:1900672/100‑1 (MQ=255)
tGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTtat > 1:2027965/1‑100 (MQ=255)
gAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTtata > 2:2266725/1‑100 (MQ=255)
tatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTatat < 2:3454169/98‑1 (MQ=255)
tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGCCAATCCCTAGGTGTTTTGCGAAAACATTCAAGGAAGAAAAAAAACA‑GTATTCTCATATgcgc > 1:2073088/1‑100 (MQ=255)
cTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCa < 2:1149958/100‑1 (MQ=255)
cTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCa < 2:43012/100‑1 (MQ=255)
cTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCa < 2:2684558/100‑1 (MQ=255)
cTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCa > 1:1473583/1‑100 (MQ=255)
cTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGAGCa > 2:1762953/1‑100 (MQ=255)
tGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACACTCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCAt < 1:1223250/100‑1 (MQ=255)
tGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCAt > 1:1462896/1‑100 (MQ=255)
tGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCAt < 2:2181912/100‑1 (MQ=255)
ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATa < 2:2396561/100‑1 (MQ=255)
ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATa < 1:2030043/100‑1 (MQ=255)
gCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATTCGCATaa > 1:374388/1‑100 (MQ=255)
gCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATaa > 2:1140179/1‑100 (MQ=255)
tgttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACca < 2:2090227/100‑1 (MQ=255)
gtACTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgca > 2:1280919/1‑100 (MQ=255)
acaaaaaaTGGGTGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTAGAAAAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgca < 2:1513234/95‑1 (MQ=255)
aCTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgcatn < 1:1140173/100‑2 (MQ=255)
aCTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgcatg < 2:1283537/100‑1 (MQ=255)
aCTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgcatg > 2:2896457/1‑100 (MQ=255)
aCTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACcatgcatg > 1:2443806/1‑100 (MQ=255)
aCTAAAAATCGATGTTTTGCTTTGAAAATATACTGGTTTTTTTCTAAAACATTAAAAAAAAAAAAAAAACA‑GTATTCTTATATGCGCa < 1:1013473/88‑1 (MQ=255)
cTAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGt > 2:2209692/1‑100 (MQ=255)
tAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTa < 1:2988997/100‑1 (MQ=255)
tAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTa < 2:3623963/100‑1 (MQ=255)
tAAAAATCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGAAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGt < 1:1258509/99‑1 (MQ=255)
aaaTCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTaact > 2:1637650/1‑98 (MQ=255)
aTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATAc > 2:1063320/1‑100 (MQ=255)
tCGATGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATAcc < 2:3671269/100‑1 (MQ=255)
aTGTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATg < 2:749860/100‑1 (MQ=255)
gTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGtt > 2:1615015/1‑100 (MQ=255)
gTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGtt > 1:2160006/1‑100 (MQ=255)
gTTTTGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTAATATGCGCATAACCATGCATGTAAATACCATGtt > 1:1965990/1‑100 (MQ=255)
gTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGtt > 2:1301659/1‑100 (MQ=255)
attttGGTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATg < 1:1004092/97‑1 (MQ=255)
tttGCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa > 1:1458102/1‑100 (MQ=255)
tGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTAcc > 1:1080202/1‑100 (MQ=255)
gCTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCg < 2:630530/100‑1 (MQ=255)
cTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGGAATTCTT‑TAAGCGCATAAACAAGCAAGTaaaaagcaagt > 1:2081664/1‑85 (MQ=255)
cTTTGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTCAATACGATGTTTAcc > 2:689493/1‑98 (MQ=255)
tttGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTg > 1:1211156/1‑100 (MQ=255)
ttGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGc < 2:3087136/100‑1 (MQ=255)
tGACAATCCCTTGGTGTTTTGCGAAAACATTCGATGAAGAAAAAAAACA‑GTATTCTTATATGCTCATAACCATGCATGTAAATACCATGTTTACCGTGCt < 2:1034422/100‑1 (MQ=255)
tGACAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCt < 1:2085547/100‑1 (MQ=255)
aCAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAg < 1:1498511/100‑1 (MQ=255)
aCAATCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAg > 1:2737351/1‑100 (MQ=255)
aaTCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTg < 1:2643119/100‑1 (MQ=255)
aaTCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTg < 1:2745923/100‑1 (MQ=255)
aTCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGa < 1:2061986/100‑1 (MQ=255)
tCCCTTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGaa < 2:3456938/100‑1 (MQ=255)
|
TTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACA‑GTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAA > NC_000913/932206‑932399
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
