Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F55 I0 R1
|
245 |
145.6 |
7293262 |
93.0% |
6782733 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,122,367 |
(G)7→6 |
100% |
intergenic (‑80/+13) |
hslV ← / ← ftsN |
peptidase component of the HslUV protease/essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,122,361 | 0 | G | . | 78.2%
| 377.4
/ 145.5
| 147 | intergenic (‑74/+19) | hslV/ftsN | peptidase component of the HslUV protease/essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base G (18/14); new base . (60/55); total (78/69) |
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 |
Only 100 of 158 total aligned reads displayed.
CGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTT > NC_000913/4122262‑4122459
|
cGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATg > 1:2436926/1‑100 (MQ=255)
ggCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATgg > 2:3528298/1‑100 (MQ=255)
gCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATggg < 1:3373403/100‑1 (MQ=255)
gCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATggg > 1:3424628/1‑100 (MQ=255)
cGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATgggg > 2:2260676/1‑100 (MQ=255)
ttccgatctcTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATATATggggg < 1:1910964/91‑1 (MQ=255)
gTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATggggg < 1:2032389/100‑1 (MQ=255)
gTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATggggg < 2:2786897/100‑1 (MQ=255)
cTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATggggggattt > 2:2025353/1‑96 (MQ=255)
cTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAg > 1:598115/1‑100 (MQ=255)
tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAgg < 1:3100558/100‑1 (MQ=255)
tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAgg > 1:3401650/1‑100 (MQ=255)
ataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGTTTTTGAggg > 2:1295181/1‑100 (MQ=255)
ataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAggg < 1:2162421/100‑1 (MQ=255)
taGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAggg > 2:243074/1‑100 (MQ=255)
aGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGtt > 1:1127367/1‑100 (MQ=255)
tctGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGttt < 2:2093771/98‑1 (MQ=255)
gTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGttt < 2:3601865/100‑1 (MQ=255)
gTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGttt < 2:1758390/100‑1 (MQ=255)
gTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGttt > 2:1882725/1‑100 (MQ=255)
gTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATATAT‑GGGGCGATTTTGATGGTTTCa > 2:386874/1‑99 (MQ=255)
tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAAc < 1:2021969/100‑1 (MQ=255)
cACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAAcc > 1:2313360/1‑100 (MQ=255)
aCGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAAcc < 2:2445667/100‑1 (MQ=255)
aCGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAAcc < 1:1343028/100‑1 (MQ=255)
cGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAAccc > 2:1414225/1‑99 (MQ=255)
gAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAAccccc < 1:640355/100‑1 (MQ=255)
aGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCcg > 1:3382915/1‑100 (MQ=255)
aGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCcg > 1:2859214/1‑100 (MQ=255)
cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCcggc > 1:1088234/1‑100 (MQ=255)
cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCcggc > 2:1102990/1‑100 (MQ=255)
aCCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCggcggc < 1:1087762/100‑1 (MQ=255)
ccccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGCTGCGGAGGATTTTGAGGGTTTCAACCCCcgccgg > 2:1961784/1‑99 (MQ=255)
ccccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGgcggcg > 1:1391843/1‑100 (MQ=255)
ctcTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAGGGGGGGGATTTTGAGGGTTTCAACCCCcggcgg < 2:3208140/96‑1 (MQ=255)
cccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGa < 1:1450707/100‑1 (MQ=255)
ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAg < 2:1081577/100‑1 (MQ=255)
ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAg < 1:314732/100‑1 (MQ=255)
ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAg < 1:1149275/100‑1 (MQ=255)
ttGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGcc < 1:3048708/100‑1 (MQ=255)
ttGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCACGGCGGCGAGcc < 1:2398799/100‑1 (MQ=255)
tGGTTACGAATACAAAGTACAAACCCCGTACAAAAGTACGGGGCTTAATGCAGTTATAGAT‑GGGGGGATTTTGAGTGTTTCAACCACCGGCGGCGAGca < 2:2575725/99‑2 (MQ=255)
ggTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCg < 1:674884/100‑1 (MQ=255)
ggTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGa > 1:404726/1‑100 (MQ=255)
ggTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGa > 1:70782/1‑100 (MQ=255)
tACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAAt > 2:3031990/1‑100 (MQ=255)
aCGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGc < 1:2136926/100‑1 (MQ=255)
cGAATACAGAGTACAAACCACGTACAAAAGAACAGGTCATAATGCAATTATAGATGGTGGTGAGTTTGAGGGTTGCAACCCCCTGCGGCGatc > 2:3038500/1‑91 (MQ=255)
aaTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAg > 2:3229442/1‑99 (MQ=255)
aaTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGt > 1:3069122/1‑100 (MQ=255)
aTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGtt < 1:2937810/100‑1 (MQ=255)
aTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGtt < 2:901995/100‑1 (MQ=255)
aCAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTg < 1:221916/100‑1 (MQ=255)
aCAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTg < 2:3134681/100‑1 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTg < 1:2573616/100‑1 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGt < 1:3312090/100‑1 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGt > 2:674154/1‑100 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGt > 2:3124486/1‑100 (MQ=255)
agagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCGCGGCGGCGAGCCGAATGCAGttt > 2:286236/1‑97 (MQ=255)
agagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTa < 1:2283679/100‑1 (MQ=255)
gagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTa < 1:538811/100‑1 (MQ=255)
gagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTAt < 2:2730792/100‑1 (MQ=255)
gagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTAt < 1:2300418/100‑1 (MQ=255)
gagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTAt > 2:2300402/1‑100 (MQ=255)
cgTACACCCCACGTACAATAGTACGGACCACGATACAACTACAGAT‑CGGCGTATTCTGATGATTTCCCCCCCCGCCGGCGAGCCGAATGCAGCTCGTAtc < 2:2458827/99‑2 (MQ=255)
tACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGa > 2:861623/1‑99 (MQ=255)
cAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGAcc > 1:1556237/1‑100 (MQ=255)
aaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGc < 1:3293570/100‑1 (MQ=255)
aCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGcc > 2:3586532/1‑100 (MQ=255)
cccGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCa > 1:456543/1‑100 (MQ=255)
cccGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCAt > 2:1529882/1‑100 (MQ=255)
cGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCt < 1:2503831/100‑1 (MQ=255)
gTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCtt < 1:1258581/100‑1 (MQ=255)
aCAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCa < 2:205476/100‑1 (MQ=255)
cAAAGGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCaa > 1:1128640/1‑100 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGGGAGCCGAATGCAGTTTGTATGACCCGCCCTCTTCaa > 2:3207743/1‑100 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCaa > 2:2500870/1‑100 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCa > 2:1845800/1‑99 (MQ=255)
aaaGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGG‑TTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCg > 1:2031880/1‑100 (MQ=255)
aaGTACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCg < 1:2382571/100‑1 (MQ=255)
aaGGACGGGGCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGACATCTTCAACCg < 2:2314349/100‑1 (MQ=255)
ggggCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAg > 2:44974/1‑100 (MQ=255)
ggggCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAg > 1:2336868/1‑100 (MQ=255)
gggCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAgg > 1:941921/1‑100 (MQ=255)
gggCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAgg > 1:3003980/1‑100 (MQ=255)
ggCATAATGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAggg < 2:328358/100‑1 (MQ=255)
gCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAggg > 1:969160/1‑100 (MQ=255)
aTGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTg > 2:1832233/1‑100 (MQ=255)
aTGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTACACCCCCGGCGGCGCGCCGAATGCAGTTTGTATGCCCCGCCATCTTCAACCGATTGAGGGTGCTGt < 1:2500886/100‑1 (MQ=255)
tGCCATTATAGAT‑GGGGGGATTTTGAGGGCTTCAACCCCCGCCGGCGAGCCGAATGCAGTTCGTATGCCCCGCCCTCTTCCACCGCTCGAGGGCGCTg > 2:2896784/1‑98 (MQ=255)
tGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTc > 1:3577774/1‑100 (MQ=255)
tGCAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTc > 1:2645999/1‑100 (MQ=255)
cAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCt > 2:3645664/1‑100 (MQ=255)
cAATTATAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCCTCTTCAACCGATTGAGGGTGCTGTCTg > 2:3068863/1‑100 (MQ=255)
ttAGAGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg < 2:1195199/97‑1 (MQ=255)
tataGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGt < 1:2873055/100‑1 (MQ=255)
ataGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTtc < 2:885241/100‑1 (MQ=255)
ataGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTtc > 2:966981/1‑100 (MQ=255)
taGAT‑GGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTtct > 1:1846436/1‑100 (MQ=255)
tGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCtt > 1:1414958/1‑100 (MQ=255)
|
CGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTT > NC_000913/4122262‑4122459
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
