Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F125 I0 R1
|
327 |
181.4 |
8809959 |
94.1% |
8290171 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,051,259 |
G→T |
21.4% |
intergenic (‑494/‑88) |
yihA ← / → yihI |
cell division GTP‑binding protein/activator of Der GTPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,051,259 | 0 | G | T | 21.4%
| 482.9
/ 130.0
| 216 | intergenic (‑494/‑88) | yihA/yihI | cell division GTP‑binding protein/activator of Der GTPase |
| Reads supporting (aligned to +/- strand): ref base G (85/84); new base T (27/19); total (113/103) |
| Fisher's exact test for biased strand distribution p-value = 3.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-02 |
Only 100 of 227 total aligned reads displayed.
CACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCA > NC_000913/4051160‑4051358
|
cacGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACagag > 1:1206752/1‑100 (MQ=255)
cacGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACagag > 2:450826/1‑100 (MQ=255)
acGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGt < 1:3171393/100‑1 (MQ=255)
cGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTa > 1:3235313/1‑100 (MQ=255)
gATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAAt > 2:1001399/1‑100 (MQ=255)
ttGTTCTGGCTAAAGAAAAAACAGGGTGTCTTGGCGGCATATAAGGATTGTAAGACCTGTTAAGGTTTAAAAAAAAAAAAAAAAGGCGACAGAGTAATCt < 1:3868236/100‑1 (MQ=255)
gTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGt > 2:3807527/1‑100 (MQ=255)
tCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCg < 2:3664033/100‑1 (MQ=255)
ccGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGc < 2:134343/100‑1 (MQ=255)
ccGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGc < 1:2838606/100‑1 (MQ=255)
ccGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGc < 2:2166058/100‑1 (MQ=255)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 2:2549547/100‑1 (MQ=255)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 2:916423/100‑1 (MQ=255)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCg < 1:3984985/98‑1 (MQ=255)
ggCTAGAGGCAAAACAGGGGGTGTTGGCCGCCTGCAAGGATAGTAAGACCCGCAGAGGTGTATGATTCGGGAAAAAAGGCGACAGAGTAATCTGt > 1:3992130/1‑95 (MQ=255)
gCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGCCtt < 2:165731/100‑1 (MQ=255)
gCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCtt < 2:1134704/100‑1 (MQ=255)
cTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGCCttt < 2:1726637/100‑1 (MQ=255)
taaattaaaaaTATGTTGTGTTGGCGGTCTGCAAGGATTGTAAGATCCGTTAAGGGTTATGAGTTAGGAAAAAAGGCGACAGATTACTCTGTCGCCt < 1:3379394/91‑1 (MQ=25)
tAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCtttt > 1:1461737/1‑100 (MQ=255)
aaGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCtttttt < 2:900122/100‑1 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGCCTTTTTTc < 2:514435/100‑1 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCtttttt > 2:4144202/1‑99 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTc > 1:3129547/1‑100 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTc > 2:4313788/1‑100 (MQ=255)
gAAAAAGAGGGTGTGTTGGGGGCCTGGAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGCCTTTTTTcct < 1:1278502/100‑3 (MQ=37)
aaaaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttg > 2:661506/1‑100 (MQ=255)
aaaaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttg > 1:1042266/1‑100 (MQ=255)
aaaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTGATGAGTCAGTAAAAAAGGCGACAGGGTGATCTGTCGCCTGTTGTCTttgc > 2:3507492/1‑100 (MQ=255)
aaCAGGGTGTATTGGCGGCCTGCAAGGATCGTAAGACCGGTTAGGGGTTATGCGTCAGGCAGAAAGACGACGGAGTAATCTGTCGCCTTTTTTCTttgct > 1:2787324/1‑100 (MQ=255)
cAGGTTGTGTTGGCGTCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttgcttg < 2:363416/100‑1 (MQ=255)
tgtgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTc > 2:2396884/1‑100 (MQ=255)
tgtgtTGGCGGCCTGCAAGGACTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTc < 2:120793/100‑1 (MQ=255)
tgtgtTGGCGCACTTCAAGGACTCTAGGCACCGTCAATTGTTATCAGTCAGGAAAAAAGGCGACAGAGTTTTTTGTCGCCTTTCTTGtt < 1:3782540/89‑1 (MQ=255)
gtgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTATTTGCTTGCTTTCt > 1:2147216/1‑100 (MQ=255)
tgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTg < 2:1585642/100‑1 (MQ=255)
gtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCt > 2:1917179/1‑98 (MQ=255)
gtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGt < 1:366502/100‑1 (MQ=255)
ttGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGtt < 2:2345468/100‑1 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAg < 2:3195429/100‑1 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAg > 2:4103252/1‑100 (MQ=255)
gcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTGATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGa > 1:1992847/1‑100 (MQ=255)
ccTGGAAGGATTGTAAGACCCGTTAAGGTTTATGAGTCAGTAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTa < 1:4062587/94‑1 (MQ=255)
cAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTccgcc > 2:116501/1‑99 (MQ=255)
aaGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCcgccgc < 1:3488361/100‑1 (MQ=255)
aGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCcgccgc > 1:4137214/1‑99 (MQ=255)
aGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCa > 1:1527124/1‑100 (MQ=255)
ggATTTTAAGACCCGTTAAGGGTTATGAGTCATGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCTCCGCaa < 1:2404014/100‑1 (MQ=255)
gATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACATAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCaaa > 1:2441142/1‑100 (MQ=255)
gATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCaaa < 1:4276915/100‑1 (MQ=255)
gATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCaaa < 2:4211577/100‑1 (MQ=255)
ttGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATc < 2:304379/100‑1 (MQ=255)
tGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCATTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCt < 1:3507474/100‑1 (MQ=255)
tAAGACCCGTTCAGGGTTATGAGTCAGGAAAAACGGCCACACCGTAATCTGCCGCCCCCTTTCTTTGCTCGCTTTCTGTTAGAATCCGCCGCAAATCtat < 1:1296138/100‑1 (MQ=255)
aaGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCtata > 2:820821/1‑100 (MQ=255)
aaGACCCGTTAAGGGTTATGAATCAGGAAAAAAGGCGACAGAGTAATCTGTCTCCTTTTTTATTTGCGTGCTTTCTGTTAGATTCCGCCGCAAAtatata > 1:1662505/1‑100 (MQ=38)
gACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACt > 2:934296/1‑100 (MQ=255)
aCCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTg < 2:2369230/100‑1 (MQ=255)
cccGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGa > 1:541368/1‑100 (MQ=255)
cccGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGa < 2:1246853/100‑1 (MQ=255)
cctttAAGGGTTATGAGTTAGGAAAAAAGGCGACAGAGTACTCTGTCGCCTTTTTTCTTTGGTTGATTTCTGTTAGATTGCGTCGCAAATCTATAc < 1:3452671/93‑1 (MQ=25)
cGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAAt < 1:2607362/100‑1 (MQ=255)
gTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATa > 2:1600097/1‑100 (MQ=255)
gTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATa > 2:2800658/1‑100 (MQ=255)
ttAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATaa < 2:746588/100‑1 (MQ=255)
aaGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGACTaaaa > 1:91351/1‑100 (MQ=255)
ggTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACgg < 2:3889348/100‑1 (MQ=255)
tGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaa > 1:1405453/1‑100 (MQ=255)
gAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa > 2:1746823/1‑100 (MQ=255)
gTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGa < 1:831793/100‑1 (MQ=255)
gTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGa > 2:1854154/1‑100 (MQ=255)
gTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGa < 2:3535771/100‑1 (MQ=255)
cAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCTAATCTATACTTAATAAAACGGCTAAAAGACg > 1:1840463/1‑100 (MQ=255)
ggAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGaa > 2:3989136/1‑100 (MQ=255)
aaaaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCa > 1:4222009/1‑100 (MQ=255)
aaaaaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCa > 2:201399/1‑100 (MQ=255)
aaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAtt > 2:697241/1‑100 (MQ=255)
aaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTGTCTGTTAGATTCCGCCGCTGATCTATACTGAATATAACGGCTAAAAGACGAAc > 1:2963678/1‑96 (MQ=37)
aaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTa > 2:3520355/1‑100 (MQ=255)
aGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCTCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAt > 1:1730343/1‑97 (MQ=38)
aGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGCATCAAACGGCTAAAAGACGAACCATTAt > 1:4032832/1‑100 (MQ=38)
aGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 2:4371669/1‑100 (MQ=255)
aGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 2:1543183/1‑100 (MQ=255)
aGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt < 2:2828562/100‑1 (MQ=255)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 2:2147046/1‑100 (MQ=255)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 2:2736076/1‑100 (MQ=255)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 2:3369016/1‑100 (MQ=255)
ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg < 2:541370/100‑1 (MQ=255)
ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 2:2588326/1‑100 (MQ=255)
gCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACAGATAAAAGACGAACAATTATGa > 1:2188045/1‑100 (MQ=38)
cGACAGAGTAATCTGTCGCCTTTTTTTTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaa > 1:700082/1‑100 (MQ=255)
cGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaa < 1:229218/100‑1 (MQ=255)
gACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaaa < 2:13261/100‑1 (MQ=255)
aCAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAc < 1:321469/100‑1 (MQ=255)
aCAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAc < 1:1826326/100‑1 (MQ=255)
cAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 2:3121902/1‑100 (MQ=255)
gagTAATCTGTCGCCTTTTTTTTTTGTTTTCTTTCTGTTAGATTTCGCCGCAAATTTATTTTGAATAATATGGCTAAAAGTCGAACCTTTTTGTAACcat > 1:788561/1‑100 (MQ=255)
gTAATCTGTCGCCTTTTTTTTTTTTTTTCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACcatca > 1:2458781/1‑100 (MQ=255)
gTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACcatca > 2:4249066/1‑100 (MQ=255)
gTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACcatca > 2:3724396/1‑100 (MQ=255)
|
CACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCA > NC_000913/4051160‑4051358
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
