Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
460,789 |
G→A |
24.5% |
M634I (ATG→ATA) |
lon → |
DNA‑binding ATP‑dependent protease La |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 460,789 | 0 | G | A | 24.5%
| 262.4
/ 81.7
| 151 | M634I (ATG→ATA) | lon | DNA‑binding ATP‑dependent protease La |
| Reads supporting (aligned to +/- strand): ref base G (67/46); new base A (20/17); total (87/64) |
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.26e-01 |
Only 100 of 155 total aligned reads displayed.
GGCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACATCCACGTCCA > NC_000913/460690‑460887
|
ggCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATg < 1:812712/100‑1 (MQ=255)
ggCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATg > 2:1817106/1‑100 (MQ=255)
cGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAATCCGCATGTTTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACa < 1:2508579/100‑1 (MQ=255)
cGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCa > 2:3118925/1‑100 (MQ=255)
cGTGGACGGAAGGGGGCGGTGAATTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACTGGTTCGCTCGGCGAAGTGATgaa > 2:703797/1‑98 (MQ=255)
gTGGACGGAAGTGGGCTGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCa < 2:3246112/99‑1 (MQ=255)
tGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAgg < 1:2228479/100‑1 (MQ=255)
tGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAgg < 1:1451493/100‑1 (MQ=255)
tGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGAGTAAAGGCAAACTCACCTATACCGGTTCGCTCGGCGAAGTGATGCAgg < 2:353512/100‑1 (MQ=255)
gacggacgTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTACAGGGTAAAGGCAAACTGAACTATACCGGTTCGCTCGGCGAATACCTGCAGGAg > 2:2976213/1‑100 (MQ=255)
gACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAg > 2:2555822/1‑100 (MQ=255)
gACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAg < 1:1582898/100‑1 (MQ=255)
gACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTACGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGa > 1:20677/1‑99 (MQ=255)
aCGGAAGTGGGCGGTGACTTGCTGACCATTGAAACAGCATGTGTTCAGGGTAAAGGCAAACTGACCTATACCCGTTCGCTCGGCGAAGTGATGCAGGAg < 2:1726683/99‑1 (MQ=255)
gAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTcc > 2:625518/1‑99 (MQ=255)
gAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGATTCGCTCGGCGAAGTGATGCAGGAGTCCa > 1:1698804/1‑100 (MQ=255)
aaGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGTAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCAt < 1:594658/100‑1 (MQ=255)
aaGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCAt < 2:1287895/100‑1 (MQ=255)
aGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCAtt < 1:2667912/100‑1 (MQ=255)
aGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGGGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCAt < 2:2941672/99‑1 (MQ=255)
gtgagCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTc < 1:1209071/96‑1 (MQ=255)
gTGGGCGGTGACTTGCTGACCATTGAAACCGCTTGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTc < 1:685314/100‑1 (MQ=255)
ggCGGTGACTTGCTGACCATTGAAACCGTATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAgg < 2:2050727/100‑1 (MQ=255)
ggTGACTTGCTGACCATTGAAACCGCATGAGTTCCGGGTAAAAGCAAACTGAACTATACCGGTTCGCTCGGCGAAGTGATACAAGAGTCCATTAAggcg > 2:1012744/1‑99 (MQ=255)
gTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAggcggc > 2:587156/1‑100 (MQ=255)
gTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAggcggc > 1:1390992/1‑100 (MQ=255)
gACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCACACTGACCTATACTGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGt > 1:726583/1‑100 (MQ=255)
aCTTGCTGACCATTGAATCCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGtt < 1:258591/100‑1 (MQ=255)
gCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACg > 2:3643079/1‑100 (MQ=255)
cTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACg > 2:945100/1‑99 (MQ=255)
tGACCATTGAAACCGCATGTGTTCCGGGTAAATGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACggt < 1:1111784/100‑1 (MQ=255)
tGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACggt > 1:644286/1‑100 (MQ=255)
tGACCATTGAAACCGCATGAGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACgg > 2:1313919/1‑99 (MQ=255)
gACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACggtg > 2:1532387/1‑100 (MQ=255)
gACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACggtg < 1:3103278/100‑1 (MQ=255)
aCCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACggtgg < 1:1854756/100‑1 (MQ=255)
cATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGTTCGGCGAAGTGATGAAGGAGTCCATTCAGGCGGCGTTAACggtggt > 1:2775626/1‑99 (MQ=255)
cATTGAAACCGCATGTGTTCCGGGAAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGtt > 2:1718006/1‑100 (MQ=255)
aTTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTc > 1:1846732/1‑100 (MQ=255)
ttGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcg > 2:1551710/1‑100 (MQ=255)
tGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcgt > 1:103194/1‑100 (MQ=255)
gAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcgtg > 2:276450/1‑100 (MQ=255)
gAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcgtg > 2:178771/1‑100 (MQ=255)
aaCCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcgtgcg < 2:3690096/100‑1 (MQ=255)
aCCGCATGTGTTCCGGGTAAAGACAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTGAGGCGGCGTTAAGGGTGGTTcgtgcgc > 2:397984/1‑100 (MQ=255)
gCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTcgtgcgcgtg > 2:844033/1‑100 (MQ=255)
cATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGACGTTAACGGTGGTTcgtgcgcgtgc > 1:726594/1‑100 (MQ=255)
gtgtTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGa < 1:3118955/100‑1 (MQ=255)
tgtTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGaa > 2:750966/1‑100 (MQ=255)
gtTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGaaa > 2:3611332/1‑100 (MQ=255)
ttCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGaaaa < 2:3447824/100‑1 (MQ=255)
tCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGaaaaa > 1:523993/1‑100 (MQ=255)
tCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGaaaaa > 1:3602153/1‑100 (MQ=255)
cGGGTAACGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTCCGCGTGCGGAAACACt > 2:2841526/1‑100 (MQ=255)
ggTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGACGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTgg > 1:3028994/1‑100 (MQ=255)
tAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTgggg < 1:1275069/100‑1 (MQ=255)
tAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTgggg < 1:1052144/100‑1 (MQ=255)
aaGGCAAACTGACCTATACCGGTTCGCTCGACGCAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGa > 2:3855190/1‑99 (MQ=255)
aGGCAAACTGAGCGATAGCGCTTCGCTCGGCGGAGTGATGCAGGAGTCCATTCAGGGGGCGTTATCGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATc < 2:1685079/100‑1 (MQ=255)
aGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATc > 2:2691948/1‑100 (MQ=255)
ggCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGTCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCa > 2:21387/1‑100 (MQ=255)
ggCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCa > 2:1084307/1‑100 (MQ=255)
gCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCaa > 2:2376089/1‑100 (MQ=255)
aaCTGACCTATACCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAAccc < 2:103191/100‑1 (MQ=255)
tGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGa < 1:2181400/100‑1 (MQ=255)
gACCTATACCGGTTCGCTCGGCGCAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGAt > 1:3503195/1‑100 (MQ=255)
gACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGAt < 1:284701/100‑1 (MQ=255)
ccTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGAttt < 1:3643118/100‑1 (MQ=255)
tataCCGGTTCGCTCAGCGAAGTGATACAGGCGTCCATTCAGGAGGCGTTAACGGTGGTTCGTGCGCGTGCGGAATAACTGGGGATCAACCCTGAttttt < 2:3163534/100‑1 (MQ=255)
ataCCGGTTCGCTCGGCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTa < 1:3879078/100‑1 (MQ=255)
taCCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTAc < 1:1558751/100‑1 (MQ=255)
taCCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTAc < 2:2808673/100‑1 (MQ=255)
taCCGGTTCGCTCGGAGAAATGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATAAACCCTGATTTTTAc > 2:2692118/1‑100 (MQ=255)
aCCGGTTCGCTCGGCGAAGTTATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTAc > 1:3691715/1‑99 (MQ=255)
ccGGTTCGCTTGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGa > 1:1550427/1‑100 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACg < 1:1872250/99‑1 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGa > 2:1619089/1‑100 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGa > 2:1632797/1‑100 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGa > 1:2946590/1‑100 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGa > 1:48848/1‑100 (MQ=255)
ccGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTAAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAACAAATGGGGATCAACCCTGATTTTTACGa > 2:368673/1‑100 (MQ=255)
cGGTTCGCTCGGCGAAGTGGTGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGaa < 1:2036397/100‑1 (MQ=255)
cGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGaa < 1:3629798/100‑1 (MQ=255)
gTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGaaaa < 2:2952121/100‑1 (MQ=255)
gCTCGGCGAAGTTATGCAGGATTCTATTCATTTGGTTTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGt < 1:362120/100‑1 (MQ=255)
gCTCGGCGAAGTGATGCAGGAGTCCATTGAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAAGCCTGATTTTTACGAAAAACg < 2:3142942/99‑1 (MQ=255)
gCTCGGCGAAGTGATGCAGGAGTCCATACAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACg > 2:1909645/1‑99 (MQ=255)
cTCGGCGCAGTGATGCAGGAGTCCATTCAGGCAGCGTTAACGGTGGTCCGTGCGCGTGCGGAAAAACTGGAGATCAACCCAGATTTTTACGAAAAACGTg > 2:2349168/1‑100 (MQ=255)
cTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTg > 1:1113255/1‑100 (MQ=255)
cTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTg > 1:3201643/1‑100 (MQ=255)
ggCGAAGTGATTCAGGAGTTAATTCAGTCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGa < 1:973831/98‑1 (MQ=255)
ggCGAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACa < 1:3645087/100‑1 (MQ=255)
gAAGTGATACAGGAGTCCATTCAGGCGGCGTTAACGGTTGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtcc < 1:180204/100‑1 (MQ=255)
gAAGTAATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtcc > 2:1898650/1‑100 (MQ=255)
aaGTGATGCAGGAGTGCATTCAGGCAGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGTTTTTTACGAAAAACGTGAAAtcca < 2:3760917/100‑1 (MQ=255)
gATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtccacgt > 1:421676/1‑99 (MQ=255)
gATACAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtccacgtc < 2:3187619/100‑1 (MQ=255)
aTGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtccacgtcc > 2:665618/1‑100 (MQ=255)
aTGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtaaacgtac > 1:1640581/1‑98 (MQ=255)
tGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACAtccacgtcca < 1:597065/100‑1 (MQ=255)
|
GGCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACATCCACGTCCA > NC_000913/460690‑460887
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
