Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,051,262 |
A→C |
18.5% |
intergenic (‑497/‑85) |
yihA ← / → yihI |
cell division GTP‑binding protein/activator of Der GTPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,051,262 | 0 | A | C | 18.5%
| 414.0
/ 94.6
| 185 | intergenic (‑497/‑85) | yihA/yihI | cell division GTP‑binding protein/activator of Der GTPase |
| Reads supporting (aligned to +/- strand): ref base A (91/59); new base C (23/11); total (114/71) |
| Fisher's exact test for biased strand distribution p-value = 5.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.63e-01 |
Only 100 of 190 total aligned reads displayed.
GGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCT > NC_000913/4051163‑4051361
|
ggATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTaa > 1:3613391/1‑100 (MQ=255)
gATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAAt > 1:3005622/1‑100 (MQ=255)
gATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAAt > 2:2018540/1‑100 (MQ=255)
gATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGACGACAGAGTaa > 1:2850754/1‑99 (MQ=255)
aTTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATc < 1:3642098/100‑1 (MQ=255)
aTTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATAAAAAAAAAAAAAAGGCGACAGAGTAATc < 2:3050661/100‑1 (MQ=255)
ttGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCt < 2:49723/100‑1 (MQ=255)
tGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTg < 1:3925080/100‑1 (MQ=255)
tGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGAAAAAAAAACGACAGAGTAATCt > 1:787601/1‑99 (MQ=255)
ttCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTc > 1:1420973/1‑100 (MQ=255)
tCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCg < 2:1515273/100‑1 (MQ=255)
cGGCTAAATGAAAAACAGGGCGTGTTTCCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 2:1607179/100‑1 (MQ=38)
cGGCTAAAGGAAAAACAGGGTGTGTTGGTGGCTTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 1:330577/100‑1 (MQ=38)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGTCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 1:71158/100‑1 (MQ=39)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 1:1915827/100‑1 (MQ=255)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 2:1523875/100‑1 (MQ=255)
cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 1:3255534/100‑1 (MQ=255)
ggCTAAAGGAAAAATAGTGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGcc < 1:1965048/99‑1 (MQ=38)
ggCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGGTTGTAAGACCCGTTAAGGGTTATGAGTCAGAAAAAAAGGCGACAGAGTAATCTGTCGc < 2:3807525/98‑1 (MQ=255)
ggCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCt > 2:40884/1‑100 (MQ=255)
ggCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCt > 1:1283644/1‑100 (MQ=255)
ggCTAAAGGAAAAACAGGATGTGTTGGCGGCCTGCAAGGATTGTAAGACCTATTAAGAATTAAAAATCAGAAAAAAAGGCGACAGATTACTCTGTCGcc < 2:1817653/99‑1 (MQ=25)
aaaGGAAAAACAGGGTGTGTTGGCGGCTTGAAAGGATTGTAAGACCCGTTTAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCttn < 2:2906530/98‑2 (MQ=255)
aaaGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCttttt < 2:3480400/100‑1 (MQ=255)
aaGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAAGCAACAGAGTAATCTGTCGCCtttttt > 1:3555381/1‑100 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGATTACTCTGTCGCCTTTTTTc < 1:2675402/100‑1 (MQ=255)
aGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTc > 2:1355830/1‑100 (MQ=255)
ggAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAATCAGGAAAAAAAGCGACAGAGTAATCTGTCGCCTTTTTTCt > 1:324172/1‑100 (MQ=255)
ggAAAAACAGGGTGTGTTGGCGGCCTGAAAGGGTTGTAAAACCCGATAAGGGGTATCGGTGAGGGAAAAAGTCGACAGAGTAATCTGTTGGCGTTTTGCt > 2:2276761/1‑100 (MQ=255)
aaaaaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCttt > 1:2414964/1‑100 (MQ=255)
aaaaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttg > 1:2181038/1‑100 (MQ=255)
aaCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttgct > 1:68431/1‑100 (MQ=255)
cAGGGTTTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttgc < 1:3693851/97‑1 (MQ=255)
ggTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTgcttgctt > 2:3206436/1‑100 (MQ=255)
ggTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTgcttgctt > 1:2703314/1‑100 (MQ=255)
tgtgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTc < 2:1232200/100‑1 (MQ=255)
gtgtTTGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTc < 2:1103281/99‑1 (MQ=255)
gtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAAGCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGt > 2:3388737/1‑100 (MQ=255)
tGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTa < 1:949068/100‑1 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATTATTCATGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAg < 1:265235/100‑1 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTa > 2:833214/1‑99 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAg > 2:2719315/1‑100 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTACTTTGCTTGCTTTCTGTTAg < 2:2388563/100‑1 (MQ=255)
ggcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGACGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAg > 1:1050992/1‑100 (MQ=255)
gcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGACAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGa > 2:2166455/1‑100 (MQ=255)
cggcCTGCAAGGATTGTAAGACCCGTTAAGGTTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGAt < 1:1570665/100‑1 (MQ=255)
cggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAAGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGAt > 1:224404/1‑100 (MQ=255)
cTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTccg > 2:3005878/1‑100 (MQ=255)
cAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTccgccg > 1:3230827/1‑100 (MQ=255)
ggATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTACTTGCTTTCTGTTAGATTCCGCCGCaa > 1:2146878/1‑100 (MQ=255)
ttGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATc < 1:1118484/100‑1 (MQ=255)
gTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCta > 2:2593435/1‑100 (MQ=255)
gTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTACTTGCTTTCTGTTAGATTCCGCCGCAAATCta > 1:3454854/1‑100 (MQ=255)
tAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCtat < 2:2855766/100‑1 (MQ=255)
aaGACCCGTTAAGGGTTATGAGTCAGTAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCtata < 2:3277528/100‑1 (MQ=255)
aGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATAc < 2:589463/100‑1 (MQ=255)
aCCCGTTAAGGGTTATGAATCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTg > 2:1068170/1‑100 (MQ=255)
cccGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGa < 2:3230796/100‑1 (MQ=255)
cGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCACAAATCTATAATGAAt > 1:1792490/1‑100 (MQ=255)
gTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCTGCAAATCTATACTGAATa > 2:3350615/1‑100 (MQ=255)
aGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAAc < 2:331920/100‑1 (MQ=255)
ggTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACgg < 2:661670/100‑1 (MQ=255)
gTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGc < 1:1838537/100‑1 (MQ=255)
gTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTAAATAAAAc > 2:3887317/1‑97 (MQ=255)
gAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa < 1:2315251/100‑1 (MQ=255)
aGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAg > 2:2897707/1‑100 (MQ=255)
gTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGa < 1:2593459/100‑1 (MQ=255)
gTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGa > 1:60870/1‑100 (MQ=255)
cAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACg < 1:2117471/100‑1 (MQ=255)
cAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACg < 1:3206467/100‑1 (MQ=255)
ggAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGaa > 1:3216690/1‑100 (MQ=255)
ggAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAAACGaa > 2:2765319/1‑100 (MQ=255)
aaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCACATCTATACTGAATAAAACGGCTACAAGACGAACCAtt > 2:2584998/1‑100 (MQ=38)
aaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAtt > 2:803869/1‑100 (MQ=255)
aaaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAAACTATACTGAATAAAACAGCTAAAAGACGAAACAt > 1:1741015/1‑99 (MQ=37)
aaGGCGACAGATTACTCTGTCGCCTTTTTTGTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTa > 2:3590831/1‑100 (MQ=255)
aaGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTa > 1:228113/1‑100 (MQ=255)
aaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTa < 2:3441518/100‑1 (MQ=255)
aGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 1:2914314/1‑100 (MQ=255)
aGGCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 1:573220/1‑100 (MQ=255)
aGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 1:1937739/1‑100 (MQ=255)
aGGCGACAGAGTAATCTGACGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACTAACCATTa > 2:466752/1‑99 (MQ=255)
ggCGACATATTACTCTATCGCATAATTTCTTTGCTTGCTTTCTATTAGATTCCGCCGCAAATCTAAACTAAATAAAACGGCCAAAAGACGAAACATTAt > 2:3096926/1‑99 (MQ=255)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGTCTAAAAGACGAActa > 1:3309924/1‑93 (MQ=38)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 2:3882780/1‑100 (MQ=255)
ggCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAAACGAACCATTATg > 2:1668837/1‑100 (MQ=255)
ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAGAGACGAACCATTATg > 1:3869620/1‑100 (MQ=255)
ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 1:3388701/1‑100 (MQ=255)
ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATg > 1:3795114/1‑100 (MQ=255)
gCGACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTACGCCGCAAATCTATACTAAATAAAACGGCTAAAAGACGAACCATTATGa > 2:1032325/1‑100 (MQ=38)
gCGACAGATCACTCTGTAGCCTTTTATATTTGCGTGCATTCTGTTAAATTCCGGGACAAATCTATACTGAATAAAAAGGATTTAAGACGAAACATTATGa > 2:1870399/1‑100 (MQ=255)
gCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt > 2:1623650/1‑98 (MQ=255)
cGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaa > 1:1986110/1‑100 (MQ=255)
cAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 1:1371322/1‑100 (MQ=255)
cAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAc > 1:2478174/1‑99 (MQ=255)
cAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAAACGAACCATTATGAAAc > 1:1657410/1‑99 (MQ=255)
gagTAATCTGTCGCCTTTTTTCTTTGCTTGTTTTCTGTTAGATTCCGCCGCAAATCTATCGTGAATAAAAAGGCTAAAAGATAAAACATTAAGAAACca > 2:729409/1‑99 (MQ=255)
tAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTACATTCCGCCGCAAATATATACTGAATAAAACGACTAAAAGACGAACCATGATGAAACcatcat > 1:335292/1‑100 (MQ=255)
aaTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACcatcat > 2:1592057/1‑99 (MQ=255)
aTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCt < 1:528000/100‑1 (MQ=255)
|
GGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCT > NC_000913/4051163‑4051361
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
