Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F125 I1 R1
|
45 |
113.1 |
5779376 |
92.5% |
5345922 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,916,004 |
(T)6→7 |
coding (1372/1383 nt) |
atpD ← |
F1 sector of membrane‑bound ATP synthase, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,915,998 | 1 | . | T | 95.5%
| 403.8
/ 10.2
| 111 | coding (1378/1383 nt) | atpD | F1 sector of membrane‑bound ATP synthase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base T (53/53); total (56/55) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 |
Only 100 of 128 total aligned reads displayed.
TGGATTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑TTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGCCTTT > NC_000913/3915899‑3916091
|
tGGATTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAg < 1:525497/100‑1 (MQ=255)
tGGATTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAg > 2:1463936/1‑100 (MQ=255)
tGGATTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAg < 1:1537466/100‑1 (MQ=255)
aTTTTCTCGACCCGACCAGACAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCGGATTAAGCCGTTAAAg > 1:558138/1‑97 (MQ=255)
aTTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑ttt < 1:1211301/100‑1 (MQ=255)
tttCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑ttttt < 2:496437/100‑1 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttg < 1:481905/100‑3 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttg < 2:2305348/100‑3 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttg < 1:673674/100‑3 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttg > 2:2772280/1‑98 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttg > 2:552843/1‑98 (MQ=255)
ctcGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGACGTTAAAG‑tttttttg > 1:1689297/1‑98 (MQ=255)
cGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttggc < 2:1316533/100‑5 (MQ=255)
gaccagaccaGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑tttttttggct > 2:375907/1‑95 (MQ=255)
accagaccagAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTCAAGTTTTTTTGGCtt < 1:1868884/100‑1 (MQ=255)
accagaccagAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCtt < 1:745026/100‑1 (MQ=255)
ccagaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCttt > 2:2121842/1‑100 (MQ=255)
ccagaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCttt < 1:2294235/100‑1 (MQ=255)
cagaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCtttt < 2:2759801/100‑1 (MQ=255)
cagaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCtttt < 1:1541598/100‑1 (MQ=255)
cagaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCtttt < 1:1091287/100‑1 (MQ=255)
agaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCttttt < 2:2375994/100‑1 (MQ=255)
agaccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCttttt > 1:1884648/1‑100 (MQ=255)
ccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCca > 1:1952605/1‑100 (MQ=255)
ccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCca > 2:2143234/1‑100 (MQ=255)
ccagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCca > 2:1659017/1‑100 (MQ=255)
cagaGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCcac < 2:1212873/100‑1 (MQ=255)
agagAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCcaca < 1:2635943/100‑1 (MQ=255)
agaACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGc > 1:83209/1‑100 (MQ=255)
gaACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGct > 1:274434/1‑100 (MQ=255)
cATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGATTTTTCCACAGcttct > 1:1693016/1‑100 (MQ=255)
ttgttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCg < 2:606358/100‑1 (MQ=255)
tgttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGa < 1:1585670/100‑1 (MQ=255)
gttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGAt < 1:1370581/100‑1 (MQ=255)
gttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGAt < 2:764374/100‑1 (MQ=255)
ttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATg < 1:311765/100‑1 (MQ=255)
ttgCTCTGCGCTGACGACGTCCAGGTGGTAAGTCAGTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATg < 1:272168/100‑1 (MQ=255)
gCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGa > 1:241610/1‑100 (MQ=255)
gCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGa > 1:2699208/1‑100 (MQ=255)
ctctGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGaa > 2:1387740/1‑100 (MQ=255)
ctctGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGaa > 2:1494943/1‑100 (MQ=255)
ctctGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGaa > 1:2298198/1‑100 (MQ=255)
tctGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAAc > 1:2844118/1‑100 (MQ=255)
cgcTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGAc > 1:2840347/1‑100 (MQ=255)
cgcTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGAc > 2:2056777/1‑100 (MQ=255)
gcTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGAcc > 2:1934976/1‑100 (MQ=255)
gcTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGAcc < 2:1590915/100‑1 (MQ=255)
cTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCa < 2:1689309/100‑1 (MQ=255)
tGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCAt < 2:274435/100‑1 (MQ=255)
gacgacGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATg > 2:676208/1‑100 (MQ=255)
acgacgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGt < 1:2009884/100‑1 (MQ=255)
cgacgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTa < 1:323341/100‑1 (MQ=255)
cgacgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTa < 1:2551857/100‑1 (MQ=255)
cgacgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTa > 1:1328939/1‑100 (MQ=255)
cgacgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTa > 1:2177007/1‑100 (MQ=255)
acgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACATCTTCTTCGATGGAACCGACCATGTAGa > 1:1005441/1‑100 (MQ=255)
acgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGa < 2:2177025/100‑1 (MQ=255)
cgTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGaa > 1:977691/1‑100 (MQ=255)
tCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCTACACCTTCTTCCATGGAACCGCCCATGTATAACg > 1:1600927/1‑100 (MQ=255)
tCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACg > 2:2704353/1‑100 (MQ=255)
tCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACg > 2:910761/1‑100 (MQ=255)
tCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑TTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGc < 1:336919/100‑1 (MQ=255)
ggtggtAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTg > 1:2479558/1‑100 (MQ=255)
gtggtAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGc < 1:639825/100‑1 (MQ=255)
ggtAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTc > 1:84166/1‑100 (MQ=255)
gtAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAGAGTTTTTTTGGCTTTTTCCTCAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTcc < 1:1579450/100‑1 (MQ=255)
gtAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTcc < 1:71917/100‑1 (MQ=255)
tAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCg > 1:930199/1‑100 (MQ=255)
tAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCg < 1:111185/100‑1 (MQ=255)
aGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGc < 1:107642/100‑1 (MQ=255)
gTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCa > 1:2846593/1‑100 (MQ=255)
tCATTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAg < 1:2871733/100‑1 (MQ=255)
aTTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGt < 2:541886/100‑1 (MQ=255)
aTTGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGt > 2:2120527/1‑100 (MQ=255)
tGCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGa < 1:827934/100‑1 (MQ=255)
gCCATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGAt > 1:1264705/1‑100 (MQ=255)
ccATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATc > 1:828809/1‑100 (MQ=255)
cATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCg < 1:1659005/100‑1 (MQ=255)
cATATCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCg < 2:2632086/100‑1 (MQ=255)
atatCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGt > 1:2319043/1‑100 (MQ=255)
atCACCCTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTAt > 2:939841/1‑100 (MQ=255)
cccTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGc > 1:2757618/1‑100 (MQ=255)
cccTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGc > 1:2527843/1‑100 (MQ=255)
cccTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGc < 2:1643307/100‑1 (MQ=255)
cTCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCt > 1:914325/1‑100 (MQ=255)
tCCGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCtt < 2:1884662/100‑1 (MQ=255)
tCCGATTAAGGCGTTAAAG‑TTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTc > 2:2669070/1‑100 (MQ=255)
cGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTcc < 1:2143216/100‑1 (MQ=255)
cGATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTcc > 2:665254/1‑100 (MQ=255)
gATTAAGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCa < 1:2121824/100‑1 (MQ=255)
ccgatctgCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCa < 1:1589843/93‑1 (MQ=255)
aTTAAGGCGTTAAAGTTTTTTTGGCTTTTTTAACCGATTCTTTGATGGCCAGGTCCATGTCGCTCGACTGTTCCGGCAGGTGATCGTATTCGCCTTCCat < 1:1682189/100‑1 (MQ=255)
aGGCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCatgatg > 1:42572/1‑100 (MQ=255)
aGGCGTTAAAG‑TTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGc > 2:2050870/1‑100 (MQ=255)
ggCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGc < 2:1104176/100‑1 (MQ=255)
gCGTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCaagatcgg > 2:1589855/1‑97 (MQ=255)
gTTAAAGTTTTTTTGTTTTTTTTCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATACCtt > 1:2648370/1‑100 (MQ=255)
gTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGCCtt < 2:83209/100‑1 (MQ=255)
gTTAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGCCtt < 2:1153311/100‑1 (MQ=255)
ttAAAGTTTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGCCttt < 1:230461/100‑1 (MQ=255)
|
TGGATTTTCTCGACCAGACCAGAGAACATTTGTTGCTCTGCGCTGACGACGTCCAGGTGGTAAGTCATTGCCATATCACCCTCCGATTAAGGCGTTAAAG‑TTTTTTGGCTTTTTCCACAGCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATGCCTTT > NC_000913/3915899‑3916091
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
