Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F200 I0 R1
|
101 |
105.4 |
5209919 |
94.4% |
4918163 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,646,678 |
G→A |
100% |
G127D (GGC→GAC) |
gor → |
glutathione oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,646,678 | 0 | G | A | 89.5%
| 348.8
/ 25.1
| 132 | G127D (GGC→GAC) | gor | glutathione oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (9/5); new base A (62/55); total (72/60) |
| Fisher's exact test for biased strand distribution p-value = 5.73e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 |
Only 100 of 134 total aligned reads displayed.
ATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGG > NC_000913/3646581‑3646774
|
aTTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAacgacg < 1:1889072/100‑1 (MQ=255)
tCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGaa < 1:1152863/100‑1 (MQ=255)
tCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGaa < 1:514470/100‑1 (MQ=255)
cATACTTCCTATGAAACCGTGCTCGGTCAAAATAACGTTGATGTGATCAAAGAATTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGCCGaa > 2:1731279/1‑99 (MQ=255)
cATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGaaa < 1:1785769/100‑1 (MQ=255)
cATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTCATGCCAAAACGCTGGAGGTAAACGACGaaa > 1:2508689/1‑100 (MQ=255)
aTACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAAc > 1:545406/1‑100 (MQ=255)
aCTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCa < 1:2555284/100‑1 (MQ=255)
cTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCAt < 2:756971/100‑1 (MQ=255)
ttCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATc > 1:1034697/1‑100 (MQ=255)
ccTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCAc < 1:1430438/100‑1 (MQ=255)
tATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACgg > 2:357979/1‑100 (MQ=255)
gAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAATCGCTGGAGGTATACGACGAAACCATCACGGCCg < 2:729854/100‑1 (MQ=255)
aaaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGAt < 1:1619504/100‑1 (MQ=255)
aaaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGAt < 1:2030308/100‑1 (MQ=255)
aaaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCAAGGCCGAt > 2:1398982/1‑100 (MQ=255)
aCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCa < 1:1732888/100‑1 (MQ=255)
aCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCa < 1:1903312/100‑1 (MQ=255)
gTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCata < 2:1260159/100‑1 (MQ=255)
gTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCata < 1:1919277/100‑1 (MQ=255)
tGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAAAGACGAAACCATCACGGCCGATCatat < 1:1585181/100‑1 (MQ=255)
tCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCt > 2:832486/1‑100 (MQ=255)
cGGTAAAAATAACGTTGATGTAATCAAAGGCTTGGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGACCATATTc > 2:1714513/1‑98 (MQ=255)
ggTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGa > 1:461398/1‑100 (MQ=255)
ggTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGa > 1:1393081/1‑100 (MQ=255)
gTAAAAATAACGTTGATGTAATCCAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTACACGACGCCACCATCACGGCCGATCATATTCTGa > 2:565247/1‑99 (MQ=255)
gTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGAt < 2:1950396/100‑1 (MQ=255)
tAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATc < 1:1631810/100‑1 (MQ=255)
aaaaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAGACCATCACGGCCGATCATATTCTGATCg > 1:459055/1‑100 (MQ=255)
aaaaaTAACGTTGATGTAATCAAAGCCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATc < 1:1819532/99‑1 (MQ=255)
aaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGcc < 2:667384/100‑1 (MQ=255)
aaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGcc > 1:2556961/1‑100 (MQ=255)
aaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGcc > 1:128756/1‑100 (MQ=255)
aTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCcac > 2:1041415/1‑100 (MQ=255)
aTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCcac > 2:1901476/1‑100 (MQ=255)
tAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCcaca > 1:1694225/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 1:333124/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 2:1342220/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 1:2416332/1‑100 (MQ=255)
cGTTGATATAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 1:1370232/1‑100 (MQ=255)
ttGATGTAATCAATGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCgg < 1:1513947/100‑1 (MQ=255)
ttGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCgg > 1:2243685/1‑100 (MQ=255)
gATGTAATCAAAGGATTTGACCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtc < 2:1164658/100‑1 (MQ=255)
aTGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCgg > 2:2321741/1‑97 (MQ=255)
aTGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcg < 2:2071727/100‑1 (MQ=255)
aTGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcg > 1:2018956/1‑100 (MQ=255)
tGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcgt > 1:378638/1‑100 (MQ=255)
tGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcgt > 1:1353920/1‑100 (MQ=255)
tGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcgt < 1:2500019/100‑1 (MQ=255)
tGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcgt > 1:2158444/1‑100 (MQ=255)
gTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtcgtc > 1:1523369/1‑100 (MQ=255)
tAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATAACGGACGGTCATATTCTGATCGCCACAGGCGGTCGTcc > 2:425362/1‑100 (MQ=255)
aaTCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGACGGTCGTCCg > 2:522620/1‑100 (MQ=255)
aTCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGa > 1:348826/1‑100 (MQ=255)
aTCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGa > 1:604527/1‑100 (MQ=255)
tCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAg < 1:90352/100‑1 (MQ=255)
tCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAg < 1:2389431/100‑1 (MQ=255)
cAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGc < 2:1707799/100‑1 (MQ=255)
cAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGc < 1:1146301/100‑1 (MQ=255)
ggCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAcc < 2:270696/100‑1 (MQ=255)
ggCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAcc < 2:2431024/100‑1 (MQ=255)
ggCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAcc < 2:1329516/100‑1 (MQ=255)
gCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAccc > 2:537938/1‑100 (MQ=255)
tttGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCgg > 1:529778/1‑100 (MQ=255)
gCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGata > 1:1912304/1‑100 (MQ=255)
gCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAACCCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGCATATTcc > 2:1821335/1‑100 (MQ=255)
gCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTcc < 2:1923413/100‑1 (MQ=255)
ttCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCgg < 1:2504012/100‑1 (MQ=255)
gTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCCCCCGGATATTCCGGGc > 2:862542/1‑99 (MQ=255)
gATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTgg < 1:946130/100‑1 (MQ=255)
gATGCCAAAACGATGGAGGTAAACGACGAAACCCTCACGGCCGGACATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTgg < 2:1177356/100‑1 (MQ=255)
aTGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTgg > 2:837183/1‑99 (MQ=255)
aTGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGa < 1:869023/100‑1 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa < 2:2508676/100‑1 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa > 2:1633951/1‑100 (MQ=255)
gCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAAt > 2:740690/1‑100 (MQ=255)
gCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAAt > 1:616778/1‑100 (MQ=255)
ccAAAACGCTGGAGGTAAACGACGAAACCCTCACGGCCGATCATATTCTGATCGCCACAGGCCGTCCTCCGCGCCACCCGGATCTTCCGGGCGTGGaa > 2:468724/1‑98 (MQ=255)
cAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATAc > 1:1085450/1‑100 (MQ=255)
aaaCGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACgg < 1:1622025/100‑1 (MQ=255)
gCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTAtt > 1:295944/1‑100 (MQ=255)
gCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTAtt > 2:591191/1‑100 (MQ=255)
cTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACACGGATATTCCGGGCGTGGAATACGGTATTg > 1:1548884/1‑100 (MQ=255)
ggAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGAt < 1:1341378/100‑1 (MQ=255)
aGGTAACCGACGAACACATCACGGCCGATCACATTCTGATCGCTACAGGCGGTAGGCCGAGCAACCCGGAAATTCCGGCCGCGGCATACGGTATTGATTc < 2:2206158/100‑1 (MQ=255)
aGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTc < 1:981300/100‑1 (MQ=255)
ggTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCt < 2:2114495/100‑1 (MQ=255)
gTAAACGGCGAAACCATCACGGCCGATCCTATTCTGATCGCCCCAGGCGGCCGTCCCAGCCACCCGGATATTCCCGTCGTGGAATACGGTAtt < 2:2556643/93‑1 (MQ=255)
gTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTg > 1:1022405/1‑100 (MQ=255)
gTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTg > 2:16194/1‑100 (MQ=255)
tAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGa > 1:2276926/1‑100 (MQ=255)
tAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGa > 1:2231146/1‑100 (MQ=255)
tAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGa > 1:2590720/1‑100 (MQ=255)
tAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGa > 1:756655/1‑100 (MQ=255)
aaaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt > 2:378705/1‑100 (MQ=255)
aaaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt > 2:836863/1‑100 (MQ=255)
aaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATg > 1:2409006/1‑100 (MQ=255)
aaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATg > 2:922508/1‑100 (MQ=255)
aaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGAGGCTGATg > 1:117615/1‑100 (MQ=255)
acgacgAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATgg > 2:1247295/1‑100 (MQ=255)
|
ATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGG > NC_000913/3646581‑3646774
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
