Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F201 I0 R1
|
306 |
176.9 |
8831342 |
93.4% |
8248473 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,646,678 |
G→A |
24.2% |
G127D (GGC→GAC) |
gor → |
glutathione oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,646,678 | 0 | G | A | 24.2%
| 385.0
/ 122.3
| 211 | G127D (GGC→GAC) | gor | glutathione oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (79/81); new base A (33/18); total (112/99) |
| Fisher's exact test for biased strand distribution p-value = 7.58e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.28e-01 |
Only 100 of 214 total aligned reads displayed.
GTATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCT > NC_000913/3646579‑3646776
|
gTATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACgg < 1:3336283/100‑1 (MQ=255)
tATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGc < 1:752919/100‑1 (MQ=255)
tCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGaa > 2:2574797/1‑100 (MQ=255)
cATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGaaa > 1:3916686/1‑100 (MQ=255)
cATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCAAAAACGCTGGAGGTAAACGACGaaa > 1:1835843/1‑100 (MQ=255)
aTACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAAc > 1:4400631/1‑100 (MQ=255)
aTACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAAc > 2:4045240/1‑100 (MQ=255)
ggaagtATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCAt > 2:3709456/6‑100 (MQ=255)
ttCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATc < 2:4160329/100‑1 (MQ=255)
ccTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCAc > 2:2797519/1‑100 (MQ=255)
ccTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCAc < 2:3681918/100‑1 (MQ=255)
ccTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCAc < 1:2233929/100‑1 (MQ=255)
cTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACg > 2:1142585/1‑100 (MQ=255)
cTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACg > 1:1391691/1‑100 (MQ=255)
cTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACg < 2:2339015/100‑1 (MQ=255)
tATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACgg < 2:3083659/100‑1 (MQ=255)
aTGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGc < 2:3641945/100‑1 (MQ=255)
aTGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGc > 2:509359/1‑100 (MQ=255)
tGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGcc > 2:521507/1‑100 (MQ=255)
aaaaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGa < 2:4286668/100‑1 (MQ=255)
aaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATc < 2:42475/100‑1 (MQ=255)
aaCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATc < 1:3879096/100‑1 (MQ=255)
ncGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATc > 1:2323309/2‑99 (MQ=255)
aCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAACACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCa < 1:953323/100‑1 (MQ=255)
aCGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCa < 1:99206/100‑1 (MQ=255)
cgcgCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCat < 1:2846195/97‑1 (MQ=255)
cGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCat > 1:3715717/1‑100 (MQ=255)
gCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATAtt > 1:3073289/1‑100 (MQ=255)
cTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTACACGGCGAAACCATCACGGCCGATCATATTc > 2:573973/1‑100 (MQ=255)
cTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTc < 2:1378344/100‑1 (MQ=255)
cTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTc > 1:4143728/1‑100 (MQ=255)
cGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTg > 1:3002826/1‑100 (MQ=255)
ggTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGCGACCATCACGGCCGATCATATTCTGa > 1:281901/1‑100 (MQ=255)
ggTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGa > 2:3789064/1‑100 (MQ=255)
ggTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGa > 1:2524556/1‑100 (MQ=255)
tAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATc < 2:1981015/100‑1 (MQ=255)
tAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATACTCTGATc < 2:2313878/100‑1 (MQ=255)
aaaaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCg < 2:3364968/100‑1 (MQ=255)
aaaaTAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGc < 1:897192/100‑1 (MQ=255)
tAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCcaca < 1:1193132/100‑1 (MQ=255)
aCGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAgg > 2:3998359/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 2:2017878/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 2:849665/1‑100 (MQ=255)
cGTTGATGTAATCAAAGGCTATGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGc > 1:2688249/1‑100 (MQ=255)
gATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGgtc > 2:1660441/1‑100 (MQ=255)
gATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCCgtc > 1:805350/1‑100 (MQ=255)
tAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTcc > 2:598151/1‑100 (MQ=255)
aaTCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCg > 2:2482026/1‑100 (MQ=255)
aTCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGa > 1:3171230/1‑100 (MQ=255)
tCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAg < 1:2167507/100‑1 (MQ=255)
tCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAg < 2:287324/100‑1 (MQ=255)
cAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGc > 2:3505591/1‑100 (MQ=255)
cAAAGGCGTTGCCCGCTGCGTTGAGGCCAAACGGCTGGAGGGAAACGGCGGAACCATCACGGCCGAGCATATTCTGATCGCCACAGGCGGTCGTCCGAg < 1:4219682/99‑1 (MQ=255)
aaaGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGc < 1:2634326/99‑1 (MQ=255)
aaGGCTTTGCCCGCTTCGTTGATGACAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCa < 1:1046809/100‑1 (MQ=255)
ggCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAcc > 2:1542860/1‑100 (MQ=255)
gCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCAccc < 2:125787/100‑1 (MQ=255)
tttGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCgg < 2:2606871/100‑1 (MQ=255)
ttGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGa < 2:2136848/100‑1 (MQ=255)
tGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGat > 1:2082711/1‑100 (MQ=255)
tGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGat > 1:2508243/1‑100 (MQ=255)
gCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGata > 1:2264535/1‑100 (MQ=255)
gCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATTTTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGata > 1:1443082/1‑100 (MQ=255)
cccGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACACGCGGTCGTCCGATCCAccc > 1:4000393/1‑94 (MQ=255)
ccGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCCCCCGGATAtt > 1:2704660/1‑100 (MQ=255)
gCTTCGTTTATTCCAAAACGCTGGATGTAAACGGCGAAACCATCACGGCCTATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTcc < 1:2930437/100‑1 (MQ=255)
gCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTcc < 2:2282442/100‑1 (MQ=255)
cGTTGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGc > 2:2245358/1‑100 (MQ=255)
gTTGATGCCAAAACGCTGGAGGTAAACGGCGACACCATCACGGCCGATCATCTTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCg > 2:1466540/1‑100 (MQ=255)
gTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCg > 2:1850067/1‑100 (MQ=255)
ttGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGAATATCCgggtgg < 2:3623332/100‑4 (MQ=255)
tGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTg < 2:61774/100‑1 (MQ=255)
tGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTg > 2:3526629/1‑100 (MQ=255)
tGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGAATATCCgggtggc < 2:3888927/100‑5 (MQ=255)
tGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTg > 2:4413070/1‑100 (MQ=255)
tGATGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTg > 2:2151732/1‑100 (MQ=255)
aTGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGa < 1:1914651/100‑1 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa > 1:3662140/1‑100 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa > 1:130183/1‑100 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa > 2:242255/1‑100 (MQ=255)
tGCCAAAACGCTGGAGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGaa > 1:3804425/1‑100 (MQ=255)
ccAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATa > 1:3525615/1‑100 (MQ=255)
ccAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATa > 1:2800004/1‑100 (MQ=255)
ccAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATa > 2:1401286/1‑100 (MQ=255)
aaaCGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACgg < 1:2430089/100‑1 (MQ=255)
aaaCGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACgg > 1:1523786/1‑100 (MQ=255)
aaaCGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACgg < 1:2032764/100‑1 (MQ=255)
gCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTAtt > 2:270758/1‑100 (MQ=255)
gCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTAtt > 1:771456/1‑100 (MQ=255)
cTGGAGGTAAACGACGCAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTg < 1:2574784/100‑1 (MQ=255)
aGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTc > 2:1423636/1‑100 (MQ=255)
aGGTAAACGGCGAAACCATCACGGCCGATCAAATTCTGATGGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATAGATTc > 1:488163/1‑100 (MQ=255)
aGGTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTc > 1:1754401/1‑100 (MQ=255)
ggTAAACGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCt > 2:2504081/1‑100 (MQ=255)
aaaCGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt < 1:573971/100‑1 (MQ=255)
aaaCGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt < 2:3844776/100‑1 (MQ=255)
aaaCGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt < 2:2207289/100‑1 (MQ=255)
aaaCGACGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGAt > 2:3155871/1‑100 (MQ=255)
aaCGGCGAAACCATCACGGCCGATCATATTCGGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATg < 1:4055691/100‑1 (MQ=255)
ggCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGct > 2:333237/1‑100 (MQ=255)
|
GTATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCT > NC_000913/3646579‑3646776
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
