Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F110 I0 R1
|
60 |
98.0 |
4713732 |
96.7% |
4558178 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,121,880 |
Δ1 bp |
49.5% |
coding (408/531 nt) |
hslV ← |
peptidase component of the HslUV protease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,121,880 | 0 | C | . | 49.5%
| 159.8
/ 211.3
| 97 | coding (408/531 nt) | hslV | peptidase component of the HslUV protease |
| Reads supporting (aligned to +/- strand): ref base C (24/24); new base . (27/21); total (51/46) |
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.72e-01 |
Only 100 of 109 total aligned reads displayed.
ATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGAT > NC_000913/4121782‑4121979
|
aTGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcg > 2:935095/1‑100 (MQ=255)
ggTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcg > 1:1311059/1‑100 (MQ=255)
gtgtGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgc > 2:1973704/1‑100 (MQ=255)
gtgtGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgc < 1:1886957/100‑1 (MQ=255)
tgtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcg > 1:912779/1‑100 (MQ=255)
gtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc > 2:659288/1‑100 (MQ=255)
gtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc < 2:507997/100‑1 (MQ=255)
gtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAACATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc > 2:1445435/1‑100 (MQ=255)
tgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgcc < 1:2034899/100‑2 (MQ=255)
ggAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgcgc > 1:1493358/1‑100 (MQ=255)
gttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTg < 1:1034540/100‑1 (MQ=255)
tggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTg > 2:2251865/1‑100 (MQ=255)
ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTgg < 1:1228564/100‑1 (MQ=255)
ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTgg > 1:288517/1‑100 (MQ=255)
ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGc > 2:2149856/1‑100 (MQ=255)
gtATAGATGCAATTGTCGCCTGCAATATCCAACGCCTTTTCAGAAATTTCACGGGCGCTAAGTACAGTGTTTTCTAACAGCGCGTGCTCCGCAGCCTggg < 2:1690041/100‑1 (MQ=255)
gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTggg < 2:1130629/100‑1 (MQ=255)
gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTggg > 1:1130634/1‑100 (MQ=255)
gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCg < 2:1704646/100‑1 (MQ=255)
tataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGc > 1:1129278/1‑100 (MQ=255)
tataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGc > 1:245433/1‑100 (MQ=255)
aGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCg < 2:13086/98‑1 (MQ=255)
aGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAg < 2:101020/100‑1 (MQ=255)
aTGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAggg < 1:872875/100‑1 (MQ=255)
tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAgg > 1:61965/1‑100 (MQ=255)
tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAgg > 1:1197890/1‑100 (MQ=255)
tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAgg > 2:1305832/1‑100 (MQ=255)
tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgc > 2:49471/1‑100 (MQ=255)
ngCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgc > 1:1959681/2‑100 (MQ=255)
ncAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAggg > 2:845397/2‑100 (MQ=255)
gCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgcc > 2:487824/1‑100 (MQ=255)
aaaTGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGgcc < 1:724641/100‑1 (MQ=255)
aaTGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGgccg > 2:2282006/1‑100 (MQ=255)
tccgatcTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg < 2:384182/94‑1 (MQ=255)
tGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg < 2:256600/100‑1 (MQ=255)
gTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGccgccg < 2:559100/100‑1 (MQ=255)
gTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGccgccg < 2:931051/100‑1 (MQ=255)
gTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGa > 1:1166528/1‑100 (MQ=255)
tCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg < 1:304750/100‑1 (MQ=255)
tCGCCCGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg < 1:2113909/100‑1 (MQ=255)
ngCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc > 1:365229/2‑100 (MQ=255)
gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc < 2:2325359/100‑1 (MQ=255)
gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCACCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc > 1:63683/1‑100 (MQ=255)
cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc > 1:501472/1‑100 (MQ=255)
cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa > 2:1683704/1‑100 (MQ=255)
tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt < 1:540707/100‑1 (MQ=255)
tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt > 2:1521939/1‑100 (MQ=255)
gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa > 2:2174194/1‑100 (MQ=255)
gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAgatcgga > 1:384185/1‑94 (MQ=255)
gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATa > 2:1393514/1‑100 (MQ=255)
tCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa > 2:542831/1‑100 (MQ=255)
gtcatcGCCCTTTCAGCAATTTCACGCGCCCTGTGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGGCGGAGCCGATAGCa < 2:1822815/94‑1 (MQ=255)
cAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAg > 1:1850147/1‑100 (MQ=255)
aCGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAg > 2:2055915/1‑100 (MQ=255)
gCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCg > 1:1541556/1‑100 (MQ=255)
gCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCg < 1:2239411/100‑1 (MQ=255)
gCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCg < 1:838286/100‑1 (MQ=255)
cTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtt > 2:1214352/1‑100 (MQ=255)
ttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGttt > 1:64038/1‑100 (MQ=255)
tCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtttt > 1:1601061/1‑100 (MQ=255)
cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 1:849275/1‑100 (MQ=255)
cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 2:2085038/1‑100 (MQ=255)
aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCt > 2:606764/1‑100 (MQ=255)
gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 2:500390/1‑100 (MQ=255)
gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 1:1989046/1‑100 (MQ=255)
cAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCt < 2:2021092/100‑1 (MQ=255)
aaTTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc < 1:501326/100‑1 (MQ=255)
aaTTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTg > 2:1901531/1‑100 (MQ=255)
aTTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGc > 1:701196/1‑100 (MQ=255)
tcccGGGCGCCAAGATCAGTGTTTTCTAACAGCGCGCTCGACGGAGCCTGGGCGTAAGGGCCGCCGGACCCGATAGCAATAAGATCGTTTTCTGGCTgg < 2:263724/96‑2 (MQ=255)
cACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacca < 2:7407/100‑1 (MQ=255)
cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg > 1:1495750/1‑100 (MQ=255)
cgttAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg < 1:2213195/95‑1 (MQ=255)
cgcTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAc > 2:2139997/1‑100 (MQ=255)
cgcTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCCGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGacac < 2:1200793/100‑1 (MQ=255)
gcTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAcc < 1:1387294/100‑1 (MQ=255)
cTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAc < 2:1264495/100‑1 (MQ=255)
cTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCg < 1:154811/100‑1 (MQ=255)
tAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAcc < 2:449359/100‑1 (MQ=255)
tAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGt < 1:133115/100‑1 (MQ=255)
aGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTa > 2:1001612/1‑100 (MQ=255)
nttCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAc > 2:910745/2‑100 (MQ=255)
gTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGtt > 2:561333/1‑100 (MQ=255)
cttCAGTGCTTTCTCACCGCGCGCCCGCCGCACCCTGGGCGTTTGGGGCTCCGGATCCTAGAGCAAGATGAGCGTGTTCTGGCTGCACCACGTCACCGt > 2:1019641/2‑99 (MQ=255)
cAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAcc < 2:1509935/100‑1 (MQ=255)
cAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAcc < 1:1360920/100‑1 (MQ=255)
cAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCgg > 1:667960/1‑100 (MQ=255)
cAGTGTTGTCTTACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAGGATCGTTTTCTGGCTGCACCACGTCACCGTTAcc > 2:1235928/1‑100 (MQ=255)
aGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCggtaacg < 1:2251884/100‑7 (MQ=255)
gtgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtg > 2:2237339/1‑100 (MQ=255)
tgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTTCCGGtga < 1:1237404/100‑1 (MQ=255)
tgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtga < 1:512795/100‑1 (MQ=255)
gtTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGGTAACGGtg < 2:1815909/100‑1 (MQ=255)
gtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgat > 1:1377188/1‑100 (MQ=255)
ttCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg < 1:1865601/100‑1 (MQ=255)
ttCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg < 1:624809/100‑1 (MQ=255)
ttCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg < 1:1797374/100‑1 (MQ=255)
ttCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg > 1:1442593/1‑100 (MQ=255)
tCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGGTAACGGtgacgt < 2:1870884/100‑4 (MQ=255)
aaCAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATaa > 1:810473/1‑100 (MQ=255)
|
ATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGAT > NC_000913/4121782‑4121979
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
