Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F201 I1 R1
|
82 |
135.0 |
6815619 |
92.9% |
6331710 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
507,147 |
(A)8→9 |
intergenic (‑65/+139) |
ybaK ← / ← ybaP |
Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase/TraB family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 507,139 | 1 | . | A | 96.3%
| 383.3
/ 6.5
| 107 | intergenic (‑57/+147) | ybaK/ybaP | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase/TraB family protein |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base A (57/46); total (59/48) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 |
Only 100 of 123 total aligned reads displayed.
ACGAAATCTTGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGCATAATAATAAAA > NC_000913/507040‑507238
|
aCGAAATCTTGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTcc > 1:956542/1‑100 (MQ=255)
gAAATCTTGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGACTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aa > 2:493535/1‑100 (MQ=255)
aaaTCTTGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaa < 1:972394/100‑1 (MQ=255)
ttGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaa > 2:1718149/1‑100 (MQ=255)
tGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaa > 1:1117403/1‑99 (MQ=255)
gTTTTTTTCGAGTAATTTAGCTGCGGGTGTCATGGTAATTTTCCTGCCTGAAACAAAAAAACGATGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaag < 1:88539/100‑3 (MQ=255)
gTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaag < 1:1001461/100‑3 (MQ=255)
gTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaag > 1:3189061/1‑98 (MQ=255)
tttttttCGATAAATTAAACGGGGGGGTTAAGGGAAATTTTCCTGCTTTAAAAAAAAAAACAAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaag < 2:1819862/99‑3 (MQ=255)
ttttttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaagag < 1:1436644/100‑5 (MQ=255)
ttttttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaagag < 1:239804/100‑5 (MQ=255)
ttttttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaagag < 2:506561/100‑5 (MQ=255)
ttttttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑aaaaaaaaaga > 1:812881/1‑96 (MQ=255)
ttttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTc < 1:2427632/100‑1 (MQ=255)
tttCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCa < 1:1254051/100‑1 (MQ=255)
cGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCt > 2:2596631/1‑100 (MQ=255)
cGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCt > 2:831169/1‑100 (MQ=255)
gAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCtt > 2:529099/1‑100 (MQ=255)
gAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCtt > 1:1551047/1‑100 (MQ=255)
aGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTg > 2:1440864/1‑100 (MQ=255)
aGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTg > 2:1357342/1‑100 (MQ=255)
aGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTg < 2:2843566/100‑1 (MQ=255)
aGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCAA‑AAAAAAAAGAGTCATCTTg < 2:2015671/100‑1 (MQ=255)
aGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGAATAAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTg < 2:1366453/100‑1 (MQ=255)
tAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGcc < 1:714777/100‑1 (MQ=255)
tAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGcc < 1:3043956/100‑1 (MQ=255)
aaTTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGcc > 1:3059022/1‑99 (MQ=255)
aaTTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCt > 2:1999621/1‑100 (MQ=255)
aaTTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCt > 2:2826522/1‑100 (MQ=255)
aTTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTa < 1:2604261/100‑1 (MQ=255)
aTTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGACATCTTGCCTa > 2:331246/1‑100 (MQ=255)
aaCTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAagag < 1:3108691/100‑1 (MQ=255)
aaCTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGt > 1:517105/1‑100 (MQ=255)
aCTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGt > 2:101561/1‑100 (MQ=255)
tGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTAt < 1:2261688/100‑1 (MQ=255)
gCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGACTAaaagaa > 1:105516/1‑96 (MQ=255)
cGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTg > 2:1658958/1‑100 (MQ=255)
cGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTg > 1:1300160/1‑100 (MQ=255)
gggTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGc < 2:1617042/100‑1 (MQ=255)
gtgtCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCa < 2:720994/100‑1 (MQ=255)
tgtCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAAAATTGGCAg > 1:2671096/1‑100 (MQ=255)
gtCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAgg < 2:1439022/100‑1 (MQ=255)
tCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGa < 2:3059010/100‑1 (MQ=255)
aTGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATg < 2:396104/100‑1 (MQ=255)
tGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATgg < 1:1718151/100‑1 (MQ=255)
tGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATgg > 1:2473163/1‑100 (MQ=255)
tGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATgg > 2:859338/1‑100 (MQ=255)
tGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATgg < 2:1300157/100‑1 (MQ=255)
tGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATg > 1:646739/1‑99 (MQ=255)
ggTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGt < 2:1551044/100‑1 (MQ=255)
ggTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGAAGGt > 2:637075/1‑100 (MQ=255)
gTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATg > 1:1636569/1‑97 (MQ=255)
gTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTg < 1:368145/100‑1 (MQ=255)
ctAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTg < 1:1020894/99‑1 (MQ=255)
aaTTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTGAGAGTATTGGaaggaaggaaa > 1:1902291/1‑96 (MQ=255)
aaTTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTgag < 2:1201302/100‑1 (MQ=255)
aaTTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTgag > 2:1020893/1‑100 (MQ=255)
ttttCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGAt < 2:668158/100‑1 (MQ=255)
ttttCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGAt < 1:2809335/100‑1 (MQ=255)
tttCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGgtggtgccctt > 1:1809694/1‑95 (MQ=255)
ttCCTGCCTTAAATAAAAAAACGAAGCAAGCATACGCCAGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTg > 2:2101295/1‑100 (MQ=255)
ccTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGa > 2:1241743/1‑99 (MQ=255)
cTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGCCATCTTGCCTAAGAGTATTGGCAGGATGGTAAAATTGa > 1:3216514/1‑98 (MQ=255)
gCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGa > 1:662786/1‑100 (MQ=255)
ccTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGAc < 2:122070/100‑1 (MQ=255)
ccTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGAc < 1:1658960/100‑1 (MQ=255)
ccTTAAACAAAAAAACGAAGCAAGCATACGCCTAATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGGGTATTGGCAGGATGGTGAGATTGAGCg > 2:2049323/1‑98 (MQ=255)
cTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACa < 2:905012/100‑1 (MQ=255)
cTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAACGaaa > 1:3304819/1‑98 (MQ=255)
ttAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCAAAAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACa < 1:729956/100‑1 (MQ=255)
ttAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACaa > 2:2200843/1‑100 (MQ=255)
tAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAAt > 1:3381030/1‑100 (MQ=255)
aaCAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACaa > 2:3029769/1‑97 (MQ=255)
aaCAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCg < 1:1357345/100‑1 (MQ=255)
aaCAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCg > 2:660533/1‑100 (MQ=255)
aCAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGa > 2:1941199/1‑100 (MQ=255)
cAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAg > 2:1688932/1‑100 (MQ=255)
cAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGGATTGGCAGGATGGTGAGATTGAGCGACaa > 2:3102247/1‑95 (MQ=255)
aaaaaaCGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGtt > 2:848364/1‑100 (MQ=255)
aaaaaaCGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGtt > 2:699057/1‑100 (MQ=255)
aaaaaaCGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGCGACATTGAGCGACAATCGAGt > 1:1940644/1‑99 (MQ=255)
aaCGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTacac < 2:3189048/100‑1 (MQ=255)
cGAAGCAAGCATACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATCGGCAGGATGAGGAGATTGAGCGTCAATctaataaaa > 1:46791/1‑89 (MQ=255)
gcaagcaTACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATAGAGTTACACCGTc > 2:2582353/1‑98 (MQ=255)
agcaTACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTTGCTTa < 2:2358182/100‑1 (MQ=255)
caTACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTAGCTTaaa > 1:2865240/1‑100 (MQ=255)
tcttccgatctGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAg < 1:1021444/90‑1 (MQ=255)
aTACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAg > 2:3404838/1‑100 (MQ=255)
aTACGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAg < 1:3029781/100‑1 (MQ=255)
aTACGCCTGATGGCGGTCC‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGt > 1:1811670/1‑100 (MQ=255)
tACGCCTGAGGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAg < 1:3102259/99‑1 (MQ=255)
cGCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGa > 1:706905/1‑100 (MQ=255)
gCCTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGAc < 2:1940640/100‑1 (MQ=255)
ccTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACg > 2:2664705/1‑100 (MQ=255)
cTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACgg < 2:3073162/100‑1 (MQ=255)
cTGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACg > 1:3126015/1‑99 (MQ=255)
tGATGGCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGc > 1:2660479/1‑100 (MQ=255)
ggCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGCataa > 1:160376/1‑100 (MQ=255)
ggCGGTCCA‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGCataa < 1:3404851/100‑1 (MQ=255)
c‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGCATAATAATaaaa > 1:2776445/1‑100 (MQ=255)
|
ACGAAATCTTGTTTTTTTCGAGTAATTTAACTGCGGGTGTCATGGTAATTTTCCTGCCTTAAACAAAAAAACGAAGCAAGCATACGCCTGATGGCGGTCC‑‑AAAAAAAAGAGTCATCTTGCCTAAGAGTATTGGCAGGATGGTGAGATTGAGCGACAATCGAGTTACACCGTCGCTTAAAGTGACGGCATAATAATAAAA > NC_000913/507040‑507238
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
