Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F201 I1 R1
|
82 |
135.0 |
6815619 |
92.9% |
6331710 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,122,367 |
(G)7→8 |
intergenic (‑80/+13) |
hslV ← / ← ftsN |
peptidase component of the HslUV protease/essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,122,360 | 1 | . | G | 99.0%
| 378.0
/ ‑2.8
| 104 | intergenic (‑73/+20) | hslV/ftsN | peptidase component of the HslUV protease/essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (57/46); total (58/46) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
Only 100 of 119 total aligned reads displayed.
ACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTT > NC_000913/4122261‑4122454
|
aCGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAt > 1:2897104/1‑100 (MQ=255)
aCGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAt > 2:2116051/1‑100 (MQ=255)
aCGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAt < 1:1642215/100‑1 (MQ=255)
cGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑g > 1:2112926/1‑100 (MQ=255)
cGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑g > 1:1880240/1‑100 (MQ=255)
ggCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCCATTATAGAT‑gg > 2:3275869/1‑100 (MQ=255)
gCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑ggg < 2:2491664/100‑1 (MQ=255)
gCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑ggg > 1:1294245/1‑100 (MQ=255)
gTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGCT‑ggg > 2:3332211/1‑98 (MQ=255)
gTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑ggggg < 2:1526570/100‑1 (MQ=255)
tACGCTTACTATAGTTGTCATGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑gggggg < 1:3017846/100‑1 (MQ=255)
aCGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑ggggggg < 1:227754/100‑1 (MQ=255)
ttACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑ggggggggatt < 1:2459886/100‑5 (MQ=255)
aCTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGAtttt < 1:713925/100‑1 (MQ=255)
cTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTg > 1:1436975/1‑100 (MQ=255)
tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGa < 1:630737/100‑1 (MQ=255)
tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGa > 1:1883788/1‑100 (MQ=255)
tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGa < 2:3244579/100‑1 (MQ=255)
ataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAg > 1:2639517/1‑100 (MQ=255)
ataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAg < 2:1880236/100‑1 (MQ=255)
taGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAgg > 2:2333103/1‑100 (MQ=255)
taGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAgg < 1:3270204/100‑1 (MQ=255)
taGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAgg < 2:2639508/100‑1 (MQ=255)
aGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAgg < 1:292380/99‑1 (MQ=255)
aGTGGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAggg < 2:2944628/100‑1 (MQ=255)
tGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGttt > 1:3316213/1‑100 (MQ=255)
gTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTc < 2:1436972/100‑1 (MQ=255)
gTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTc < 2:1289357/100‑1 (MQ=255)
gTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTc > 1:1064779/1‑100 (MQ=255)
gTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGAGTTTGAGGGATTc > 2:3011579/1‑100 (MQ=255)
tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCa < 2:3149638/100‑1 (MQ=255)
tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCa > 1:1268814/1‑100 (MQ=255)
tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCa < 2:2246702/100‑1 (MQ=255)
tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCa > 1:1037758/1‑100 (MQ=255)
cACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCaa > 1:2550075/1‑100 (MQ=255)
cACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCaa > 1:147186/1‑100 (MQ=255)
cACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCaa > 1:1108238/1‑100 (MQ=255)
cACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGATTCa > 1:2612973/1‑99 (MQ=255)
aCGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAAc > 2:1173356/1‑100 (MQ=255)
cGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAAcc < 2:1443279/100‑1 (MQ=255)
gAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAAccc < 2:720126/100‑1 (MQ=255)
aGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAAcccc < 2:1739266/100‑1 (MQ=255)
gCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAAccccc < 1:245242/100‑1 (MQ=255)
cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCcg < 2:768513/100‑1 (MQ=255)
cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCcg < 2:261349/100‑1 (MQ=255)
cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGGATTTTGAGGGTTTCAAcccc > 2:1367183/1‑97 (MQ=255)
tGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCcgg > 1:2913310/1‑100 (MQ=255)
tGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGATTCAACCCCcgg > 1:2740056/1‑100 (MQ=255)
cccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCggcggc < 2:2730505/100‑1 (MQ=255)
tGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAg < 2:573274/99‑1 (MQ=255)
gTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCg > 1:1031537/1‑100 (MQ=255)
gTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCg > 1:2918571/1‑100 (MQ=255)
tACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGaa > 1:1018041/1‑100 (MQ=255)
tACGAATACAGAGAACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGaa > 2:2109843/1‑100 (MQ=255)
aCGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGa > 2:3239372/1‑98 (MQ=255)
cGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGATTCAACCCCCGGCGGCGAGCCGAATg > 1:179465/1‑100 (MQ=255)
gAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGc < 2:2913299/100‑1 (MQ=255)
aaTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCa > 1:1385945/1‑100 (MQ=255)
aTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAg > 2:241484/1‑100 (MQ=255)
aTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAg < 1:803245/100‑1 (MQ=255)
aTACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAg < 2:2112922/100‑1 (MQ=255)
tACAGAGTACGAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGt < 2:3306618/100‑1 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGttt > 2:370663/1‑100 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGttt < 2:179464/100‑1 (MQ=255)
cAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGttt < 2:2612965/100‑1 (MQ=255)
gagTACAAACCCCGTACAAACGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGATTCAACCCCCGGCGGCGAGCCGAATGCAGttt > 2:2157021/1‑98 (MQ=255)
tACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATg < 2:1272217/100‑1 (MQ=255)
aCAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGa > 1:1106567/1‑100 (MQ=255)
aCAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGa > 2:2601866/1‑100 (MQ=255)
cAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGAc > 1:1404233/1‑100 (MQ=255)
aaaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGAcc < 1:17029/100‑1 (MQ=255)
cccGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGcc > 1:1120404/1‑100 (MQ=255)
cccGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGcc < 1:2635216/100‑1 (MQ=255)
cccGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGcc > 1:901580/1‑100 (MQ=255)
gTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATc > 2:1037399/1‑100 (MQ=255)
gTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATc < 1:502454/100‑1 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTc < 2:2723199/100‑1 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTc > 2:73609/1‑100 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTc > 1:3249869/1‑100 (MQ=255)
cAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTCCCACCCCCGGCGGCGAGCCGAGTGCAGTTTGTGTGACCCACCctcctc > 2:3192739/1‑100 (MQ=255)
aaaGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCaa > 2:1355956/1‑100 (MQ=255)
aaaGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCaa > 2:3377748/1‑100 (MQ=255)
aGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAAcc < 2:2649277/100‑1 (MQ=255)
aGTACGGGGCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAAcc < 1:1420648/100‑1 (MQ=255)
ggCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAg < 2:2897093/100‑1 (MQ=255)
ggCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAg > 1:2959014/1‑100 (MQ=255)
gCATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAgg < 1:2128092/100‑1 (MQ=255)
cATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAggg > 2:1195037/1‑100 (MQ=255)
cATAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAggg > 2:3344133/1‑100 (MQ=255)
tAATGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCCGTTTGTATGACCCGCCCTCTTCAACCGATTGactctt > 1:1420576/1‑95 (MQ=255)
aaTGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTg > 2:911646/1‑99 (MQ=255)
aTGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCt > 1:502881/1‑100 (MQ=255)
aTGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCt > 2:202278/1‑100 (MQ=255)
aTGCAATTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCt > 2:2084641/1‑100 (MQ=255)
aTTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg < 1:2791979/100‑1 (MQ=255)
aTTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg > 1:3053204/1‑100 (MQ=255)
aTTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg < 1:3144760/100‑1 (MQ=255)
aTTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg > 1:2725321/1‑100 (MQ=255)
aTTATAGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg > 1:732085/1‑100 (MQ=255)
taGATGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGtt < 2:1294242/100‑1 (MQ=255)
|
ACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAT‑GGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTT > NC_000913/4122261‑4122454
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
