Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F258 I1 R1
|
132 |
116.1 |
5785507 |
94.2% |
5449947 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,580,930 |
(A)9→8 |
intergenic (‑125/‑208) |
yhhX ← / → yhhY |
putative oxidoreductase/aminoacyl nucleotide detoxifying acetyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,580,922 | 0 | A | . | 97.0%
| 404.2
/ 9.8
| 102 | intergenic (‑117/‑216) | yhhX/yhhY | putative oxidoreductase/aminoacyl nucleotide detoxifying acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base . (57/39); total (59/43) |
| Fisher's exact test for biased strand distribution p-value = 5.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 111 total aligned reads displayed.
TGGTTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC > NC_000913/3580825‑3581014
|
tggtTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaa > 2:901958/1‑100 (MQ=255)
tggtTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaa < 1:94448/100‑1 (MQ=255)
ggtTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaa < 1:2765671/100‑1 (MQ=255)
gtTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaa > 1:2210812/1‑100 (MQ=255)
ttATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaa > 2:1526786/1‑100 (MQ=255)
aTTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaa > 2:2317376/1‑100 (MQ=255)
tACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcc < 2:1112599/100‑4 (MQ=255)
acacCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcca > 2:1520258/1‑96 (MQ=255)
acacCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcca < 1:1152851/100‑5 (MQ=255)
cacCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAg < 1:2471328/100‑1 (MQ=255)
acCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGc < 1:92340/100‑1 (MQ=255)
ccTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCa > 2:1289312/1‑100 (MQ=255)
ccTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCa > 2:923054/1‑100 (MQ=255)
ccTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCa > 1:1762270/1‑100 (MQ=255)
cTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAc > 2:1768555/1‑100 (MQ=255)
aGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCg < 1:179537/100‑1 (MQ=255)
gcgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCgg > 1:618765/1‑100 (MQ=255)
cgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACTCggc < 1:1910529/100‑1 (MQ=255)
cgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggc > 2:433890/1‑100 (MQ=255)
cgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggc < 1:455131/100‑1 (MQ=255)
cgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggc > 1:2586944/1‑100 (MQ=255)
gcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGccgggtgct > 2:688270/1‑92 (MQ=255)
gcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggct > 2:337535/1‑100 (MQ=255)
aaaGCTGACGTGCTTCCTACTGGAGTGCGCATAACGAACAGAAGCACTCCCGTAGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggctgg < 2:762871/100‑1 (MQ=255)
aaaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGccgggtgctg < 2:2438724/99‑10 (MQ=255)
aGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggctggct < 1:1127050/100‑1 (MQ=255)
aGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggctggct < 1:1245443/100‑1 (MQ=255)
gCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCggctggct < 1:1068763/100‑1 (MQ=255)
gCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTa < 2:2491305/100‑1 (MQ=255)
ggACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAg < 1:1525802/100‑1 (MQ=255)
aCGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTa < 2:1587905/100‑1 (MQ=255)
aCGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTa < 1:983994/100‑1 (MQ=255)
cGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTagatcg > 1:2347721/1‑95 (MQ=255)
cGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTAAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTaa > 2:1779321/1‑100 (MQ=255)
tGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATa > 2:2387314/1‑100 (MQ=255)
ggTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATAc > 2:2736551/1‑100 (MQ=255)
ggTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATAc > 1:2661829/1‑100 (MQ=255)
ttacTACTGTATTGCGCATAACGAAAACAAGCACGCCCGTGGATTAATTCATAACGAAATATCTAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAAt < 2:1899563/94‑1 (MQ=255)
ttCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAATATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTg < 2:2483264/100‑1 (MQ=255)
ttCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTg < 1:925912/100‑1 (MQ=255)
cctcctGGAGTGCGCATAACGACCACAAGCACTCCCGTGGATAAATTGGGAACGAAAGATC‑AAAAACAAGCCAGCACCCGGCTGGCTAAGTAATACTGGa < 2:2412164/100‑1 (MQ=255)
cTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGaa > 1:963755/1‑100 (MQ=255)
cTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCa > 1:669118/1‑100 (MQ=255)
cTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCa < 2:2334776/100‑1 (MQ=255)
ggAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAt > 1:826559/1‑100 (MQ=255)
gTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtgtg < 1:381700/100‑1 (MQ=255)
gcgcATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAg > 1:1704745/1‑100 (MQ=255)
cgcATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGc > 1:2488708/1‑100 (MQ=255)
gcATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCa > 2:240221/1‑100 (MQ=255)
aTAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAAt > 1:986504/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAAt > 2:576810/1‑99 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 2:923247/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 2:581892/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 2:1179937/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 2:2186487/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 1:1220352/1‑100 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATg > 1:1841820/1‑100 (MQ=255)
aaCGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGt > 1:817662/1‑100 (MQ=255)
cGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCg > 1:1884711/1‑100 (MQ=255)
aaCACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTg > 2:741311/1‑100 (MQ=255)
acagAAGCACTCCCGTGGATAAATTAAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGGCGTg < 2:683869/99‑1 (MQ=255)
cacaAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCt > 1:113470/1‑100 (MQ=255)
cacaAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCt > 2:2135458/1‑100 (MQ=255)
acaAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCtt > 2:2688087/1‑100 (MQ=255)
caAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCttt > 1:1814414/1‑100 (MQ=255)
caAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCttt > 2:2165851/1‑100 (MQ=255)
caAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCttt > 1:2112296/1‑100 (MQ=255)
aGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCa > 2:252455/1‑100 (MQ=255)
aGCACTCCCGTAGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCa < 2:1261656/100‑1 (MQ=255)
gCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAg < 2:482723/100‑1 (MQ=255)
gCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAg < 1:1075343/100‑1 (MQ=255)
cACTCCCGTGGATAAATTGAGAATGAAATATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAgg < 1:2318999/100‑1 (MQ=255)
cACTCCCGTGGATAAATTGAGAACGAAAGAT‑TAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAgg < 2:1222759/100‑1 (MQ=255)
cTCCCGTGGATAAATTTAGACCGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt < 1:466176/99‑1 (MQ=255)
cccGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTTAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtct > 2:1064065/1‑100 (MQ=255)
cccGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtct > 1:2567816/1‑100 (MQ=255)
cccGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtct > 2:1130045/1‑100 (MQ=255)
ccGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtctc > 1:1117577/1‑100 (MQ=255)
ccGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtctc > 1:2566694/1‑100 (MQ=255)
gTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCGCCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcg < 2:1729426/100‑1 (MQ=255)
gTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcg > 2:2081727/1‑100 (MQ=255)
tGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtctc > 2:2576801/1‑97 (MQ=255)
gATAAATTGAGAACGAAAGA‑CCAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGa > 2:1771850/1‑100 (MQ=255)
aTAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAg < 1:2165864/100‑1 (MQ=255)
aTAAATTGAAAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAg < 2:1398061/100‑1 (MQ=255)
tAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAgg > 2:505153/1‑100 (MQ=255)
aaaTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATCCTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAggg < 1:1779334/100‑1 (MQ=255)
aaaTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGTGCAATGTCGTGCTTTCAGGTTCTCCGCGAggg < 1:2736572/100‑1 (MQ=255)
aaaTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAggg > 2:2257384/1‑100 (MQ=255)
aTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTc > 2:2381879/1‑100 (MQ=255)
tGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCtt > 1:953964/1‑100 (MQ=255)
agaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 1:923056/100‑1 (MQ=255)
agaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 1:2387329/100‑1 (MQ=255)
agaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 2:2659015/100‑1 (MQ=255)
gaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCt < 1:901959/100‑1 (MQ=255)
gaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCt < 2:2210799/100‑1 (MQ=255)
cGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGAt > 2:2818888/1‑100 (MQ=255)
cGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGAt > 2:2553245/1‑100 (MQ=255)
gAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATc > 2:1119877/1‑100 (MQ=255)
gAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATc < 1:16340/100‑1 (MQ=255)
|
TGGTTATTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC > NC_000913/3580825‑3581014
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
