Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F258 I1 R1
|
132 |
116.1 |
5785507 |
94.2% |
5449947 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,671,943 |
G→C |
intergenic (‑49/‑471) |
yhjB ← / → yhjC |
putative DNA‑binding transcriptional response regulator/LysR family putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,671,943 | 0 | G | C | 97.8%
| 477.3
/ ‑4.0
| 135 | intergenic (‑49/‑471) | yhjB/yhjC | putative DNA‑binding transcriptional response regulator/LysR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base C (73/59); total (74/61) |
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 135 total aligned reads displayed.
TCATTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGGTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGTTACA > NC_000913/3671846‑3672038
|
tCATTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTa < 2:119916/100‑1 (MQ=255)
tCATTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTa < 1:660130/100‑1 (MQ=255)
aTTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTAtt > 1:381023/1‑100 (MQ=255)
aTTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTAtt > 2:2613440/1‑100 (MQ=255)
aTTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTAtt > 1:2294777/1‑100 (MQ=255)
tCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAc > 2:1024659/1‑100 (MQ=255)
ccATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAcc < 1:2441432/100‑1 (MQ=255)
ccATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAcc > 1:1848035/1‑100 (MQ=255)
ccATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAc > 2:548845/1‑99 (MQ=255)
cATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAccc > 1:150569/1‑100 (MQ=255)
aTGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCcg < 2:209913/100‑1 (MQ=255)
tGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCcgc < 2:1470223/100‑1 (MQ=255)
tGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCcgc > 1:1917017/1‑100 (MQ=255)
tGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCcgc > 1:1451173/1‑100 (MQ=255)
gAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCcgcg < 1:614407/100‑1 (MQ=255)
ataaataTTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCgag < 2:2146543/100‑1 (MQ=255)
taaataTTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAGTACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCgaga < 1:1150631/100‑1 (MQ=255)
taaataTTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCgaga > 2:1440931/1‑100 (MQ=255)
aataTTGACTGCCTGTCAAACATGACTATTTGCATAGCTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGaaa > 1:1849391/1‑100 (MQ=255)
aataTTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGaaa < 2:1566522/100‑1 (MQ=255)
aataTTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGaaa < 2:1848022/100‑1 (MQ=255)
tatTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGaaaaa > 2:2775990/1‑100 (MQ=255)
atTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGaaaaaa > 1:922480/1‑100 (MQ=255)
tGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATa > 1:584057/1‑100 (MQ=255)
gACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATaa < 2:1068779/100‑1 (MQ=255)
gACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATaa > 2:2549995/1‑100 (MQ=255)
aCTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAg < 1:2710475/100‑1 (MQ=255)
cTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGa > 2:1072230/1‑100 (MQ=255)
cTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGa < 1:686300/100‑1 (MQ=255)
tGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCg > 2:186918/1‑100 (MQ=255)
tGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCg < 2:1020235/100‑1 (MQ=255)
gTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGc > 1:2679846/1‑100 (MQ=255)
cAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCa < 2:2018626/100‑1 (MQ=255)
tGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGc < 2:494478/100‑1 (MQ=255)
tGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAAAAAGAATTCGCCATTTGGc > 2:39144/1‑100 (MQ=255)
tGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTAAAAAAAAAAAAAAATAAGAATTCGCCATTTGGc < 2:793664/100‑1 (MQ=255)
cTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTTGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGt > 2:1276802/1‑100 (MQ=255)
tATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTg > 2:1092935/1‑100 (MQ=255)
aTTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTgg > 2:2336886/1‑100 (MQ=255)
aTTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTgg < 1:217088/100‑1 (MQ=255)
tttGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAATGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGc < 2:1608876/100‑1 (MQ=255)
gCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCAt < 1:1476375/100‑1 (MQ=255)
cATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCAtt > 1:2426715/1‑100 (MQ=255)
cATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCAtt < 1:1024661/100‑1 (MQ=255)
aTAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTc > 1:2487413/1‑100 (MQ=255)
aTAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTc > 1:538368/1‑100 (MQ=255)
aTAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTc > 1:538367/1‑100 (MQ=255)
aaCTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTa > 1:1932381/1‑100 (MQ=255)
aCTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTAc > 1:2427882/1‑100 (MQ=255)
cTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACa < 2:2127035/100‑1 (MQ=255)
tGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACag > 2:1496769/1‑100 (MQ=255)
gAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAATTAAGAATTCGCCATTTGGCGGTGGCCATTCTACaga < 1:2032836/100‑1 (MQ=255)
gAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACaga < 1:956592/100‑1 (MQ=255)
aTCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAgaga > 2:602093/1‑100 (MQ=255)
ctcCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATg > 1:2490671/1‑100 (MQ=255)
tcCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGa > 1:1633256/1‑100 (MQ=255)
ccACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTGCAGAGATGAc > 2:97849/1‑100 (MQ=255)
ccACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTGCAGAGATGAc > 2:98264/1‑100 (MQ=255)
cACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACg > 2:1700420/1‑100 (MQ=255)
cACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACg > 2:1617000/1‑100 (MQ=255)
aCCTTAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACgt < 2:2294764/100‑1 (MQ=255)
ccTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACgtg < 2:751473/100‑1 (MQ=255)
cTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTGCAGAGATGACgtgt < 1:97849/100‑1 (MQ=255)
cTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTGCAGAGATGACgtgt < 1:98264/100‑1 (MQ=255)
cTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACgtgt > 1:1816823/1‑100 (MQ=255)
tGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTa > 1:974534/1‑100 (MQ=255)
tGAATACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTa > 1:1357159/1‑100 (MQ=255)
aaTACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGa < 1:2744796/100‑1 (MQ=255)
aTACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGaa < 2:1668986/100‑1 (MQ=255)
aTACGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGaa > 1:2122369/1‑100 (MQ=255)
cGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGaaaa > 1:559067/1‑99 (MQ=255)
cGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAAt < 1:1072232/100‑1 (MQ=255)
cGTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAAt > 1:2087766/1‑100 (MQ=255)
gTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATa > 2:2533791/1‑100 (MQ=255)
gTTAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATa > 2:282620/1‑100 (MQ=255)
ttAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAg > 1:2182906/1‑100 (MQ=255)
ttAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAg > 2:1636937/1‑100 (MQ=255)
tAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGt < 2:1451166/100‑1 (MQ=255)
tAAAAAGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGt < 2:2783924/100‑1 (MQ=255)
aaaaGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTa < 1:233858/100‑1 (MQ=255)
aaaaGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTa > 2:1368041/1‑100 (MQ=255)
aaaaGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTa > 1:393993/1‑100 (MQ=255)
aaaGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTAc < 1:940258/100‑1 (MQ=255)
aaGACTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTAcc < 1:2599852/100‑1 (MQ=255)
aaGACTTAAGTAGTGGAAGGCTATAAAAAAAAAAAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTAcc < 2:1027561/100‑1 (MQ=255)
aCTTAAGTAGTGGAAGGGTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGat < 2:255548/100‑1 (MQ=255)
cTTAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGata < 1:2776011/100‑1 (MQ=255)
ttAAGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGatat > 1:708935/1‑100 (MQ=255)
aaGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGAtata > 2:721714/1‑99 (MQ=255)
aaGTAGTGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATaa > 2:2747916/1‑100 (MQ=255)
agtagtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATaaa > 1:2521284/1‑100 (MQ=255)
ttatagAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATa < 1:1882471/95‑1 (MQ=255)
tagtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATa < 2:529582/100‑1 (MQ=255)
agtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAg < 1:2282706/100‑1 (MQ=255)
gtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGt > 1:2662265/1‑100 (MQ=255)
gtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGt > 2:1974339/1‑100 (MQ=255)
gtGGAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGt > 2:668927/1‑100 (MQ=255)
ggAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGTTa > 1:2846775/1‑100 (MQ=255)
gAAGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGTTAc < 1:1636949/100‑1 (MQ=255)
aaGGCTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGTTACa < 2:2855792/100‑1 (MQ=255)
|
TCATTCCATGAATAAATATTGACTGCCTGTCAAACATGACTATTTGCATAACTGAATCTCCACCTGAATACGTTAAAAAGACTTAAGTAGTGGAAGGGTATTACCCGCGAGAAAAAATAAGAATTCGCCATTTGGCGGTGGCCATTCTACAGAGATGACGTGTAGAAAATAGTTACCGATATAAATAGTTACA > NC_000913/3671846‑3672038
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
