Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I1 R1
|
75 |
123.0 |
6181441 |
93.9% |
5804373 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,556,769 |
(T)9→8 |
intergenic (‑449/‑224) |
yjiC ← / → iraD |
uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,556,761 | 0 | T | . | 93.9%
| 589.8
/ 32.4
| 149 | intergenic (‑441/‑232) | yjiC/iraD | uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor |
| Reads supporting (aligned to +/- strand): ref base T (7/2); new base . (48/91); total (55/94) |
| Fisher's exact test for biased strand distribution p-value = 1.35e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 |
Only 100 of 179 total aligned reads displayed.
TATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGA > NC_000913/4556663‑4556856
|
tGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttt > 1:680509/1‑100 (MQ=255)
tGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttt > 2:320121/1‑100 (MQ=255)
tGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttt > 2:1010127/1‑100 (MQ=255)
ggAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttttn < 1:1530933/99‑2 (MQ=255)
gAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttttttt < 2:647678/100‑1 (MQ=255)
gAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttttttt > 2:932354/1‑100 (MQ=255)
aaattatttatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGttttttttg < 1:31880/91‑2 (MQ=255)
aaataaatAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGttttttttg < 2:256534/100‑2 (MQ=255)
aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTATCGGttttttttga < 1:2072514/100‑3 (MQ=255)
ataaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGttttttttgag < 2:76880/100‑4 (MQ=255)
ataaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGttttttttgag < 1:937166/100‑4 (MQ=255)
aaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGtt > 2:716435/1‑100 (MQ=255)
ataatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGtttttttttttttt > 2:1360657/1‑94 (MQ=255)
ataatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTtg < 2:589734/100‑1 (MQ=255)
taatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTtga < 1:1099080/100‑1 (MQ=255)
aatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTtgat < 1:979266/100‑1 (MQ=255)
tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTgatgat < 2:2247774/99‑1 (MQ=255)
ccACCTGAATTAAGTAGCAGCGGTTACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGAtttt < 2:2056893/100‑1 (MQ=255)
ccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGAtttt < 2:2333681/100‑1 (MQ=255)
ccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGAtttn < 1:658489/100‑2 (MQ=255)
ccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACGATTCGGAATATTCAGAATTTACTAGCGG‑TTTTTTTTGAGTTTGATGAtttt < 1:2929665/100‑1 (MQ=255)
cACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑AGTTTGATGAttttt > 2:2111741/1‑100 (MQ=255)
cACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGAttttt > 1:2642055/1‑100 (MQ=255)
ccGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑TTTTTTATTATTTTTAt > 2:2548037/1‑100 (MQ=255)
ccGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTAt > 1:2356175/1‑100 (MQ=255)
ggAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTAAGTTATTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCa < 2:2848888/100‑1 (MQ=255)
gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCa < 2:805162/99‑1 (MQ=255)
gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCa > 1:1775572/1‑99 (MQ=255)
aaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCaa < 2:1547077/99‑1 (MQ=255)
aTTAAGTAGCAGCGGTGACTTGTATTTTCATCGACGTAATTGTCCGGAATATTCAGATTATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATc < 2:2440230/96‑1 (MQ=255)
aTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAAt < 1:897354/100‑1 (MQ=255)
tAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATGTTCAGAATGTACTAGCGG‑GTTGTTTTGAGTTTGATGAGTTTTATCaaa > 1:1685261/1‑97 (MQ=255)
tAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGGTTTTTATCAAATCa < 2:1477438/100‑1 (MQ=255)
tAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCa < 2:1243678/100‑1 (MQ=255)
tAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCa > 2:1222782/1‑100 (MQ=255)
aaGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCAt < 2:2440313/100‑1 (MQ=255)
aaGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCAt > 1:1926634/1‑100 (MQ=255)
aGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATg < 1:1870911/100‑1 (MQ=255)
tAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGAc > 2:1395235/1‑100 (MQ=255)
gcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtt > 1:1888572/1‑100 (MQ=255)
cGGTGACAAGTATTTTCATCTACGTATCTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttttt < 2:2583562/100‑1 (MQ=255)
cGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttttt < 2:1546152/100‑1 (MQ=255)
ggTGATAAGTATTTTTATCTACGTAATTATTCCGAATTTTCAGAATATACTCGC‑CATGTTTTTTGCGTTTCACGATTTTTATCAAATCATGACTTTTTTc < 2:385743/100‑1 (MQ=255)
gTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTcc < 1:278892/100‑1 (MQ=255)
gTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTcc < 1:2109861/100‑1 (MQ=255)
tGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑AGTTTGATGATTTTTATCAAATCATGACTTTTTTCCt < 2:1646909/100‑1 (MQ=255)
tGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCt < 1:1611464/100‑1 (MQ=255)
aCAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTg < 2:679298/99‑1 (MQ=255)
cAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑TTTTTTTTTATTTTTATCAAATCATGACTTTTTTCCt > 2:2718923/1‑97 (MQ=255)
cAAGTATTTTCATCTACGTAACGATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaa > 2:1795323/1‑100 (MQ=255)
aaGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaa < 1:2879792/100‑1 (MQ=255)
aaGTATTTTCATATACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaa < 1:1795342/99‑1 (MQ=255)
aGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa < 2:2664695/100‑1 (MQ=255)
aGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa > 1:2980495/1‑100 (MQ=255)
gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAg < 1:748846/100‑1 (MQ=255)
gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAg > 2:297037/1‑100 (MQ=255)
aTTTTAATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTc < 1:1003769/100‑1 (MQ=255)
ttttTATCTATGTAATTATTTGTAATATTCAGAATATACTAGTGG‑TTTTTTTTGAGTTTGATGATTTTTATTAAATCATGATTTTTTTTCTTAAAAGtt < 2:206827/99‑2 (MQ=255)
ttttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCa < 2:1598564/100‑1 (MQ=255)
tCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa < 1:1265314/100‑1 (MQ=255)
cATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAg > 1:1737145/1‑100 (MQ=255)
cATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAg < 2:17859/100‑1 (MQ=255)
cATCTACGTAAATATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAg < 1:2487088/100‑1 (MQ=255)
aTCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa < 1:2543473/100‑1 (MQ=255)
tACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGatat > 1:544402/1‑100 (MQ=255)
gTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCa < 1:716438/100‑1 (MQ=255)
tAATTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCa < 1:1105453/99‑1 (MQ=255)
aaCTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa > 1:81878/1‑100 (MQ=255)
cTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAgg < 2:1926612/100‑1 (MQ=255)
cTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAgg > 1:1369264/1‑100 (MQ=255)
tATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGc < 1:1114984/100‑1 (MQ=255)
tATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGc < 1:2532820/100‑1 (MQ=255)
ttCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaa > 1:2187648/1‑100 (MQ=255)
tCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAg < 1:758896/100‑1 (MQ=255)
tCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAg < 2:558358/100‑1 (MQ=255)
cGGAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTAAGTAGATATTCATAGGCAAGt > 2:1074703/1‑100 (MQ=255)
ggAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGt < 1:284126/99‑1 (MQ=255)
gAATATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa < 2:1862815/100‑1 (MQ=255)
aaTATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATTAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAg > 1:2772590/1‑100 (MQ=255)
aaTATTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa < 2:1966026/99‑1 (MQ=255)
atatTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAgg < 1:1642075/100‑1 (MQ=255)
tatTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGt < 1:431076/100‑1 (MQ=255)
atTCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGtt < 1:2983623/100‑1 (MQ=255)
ttCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGttt < 1:536890/100‑1 (MQ=255)
ttCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGttt < 1:1078283/100‑1 (MQ=255)
ttCAGAATATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGttn < 1:1542921/100‑2 (MQ=255)
gAATATACTAGCGGTTTTTTTTT‑TTTTTTATGATTTTTATCAAATCATGACTTTTTTCCTGTAAAGTCAGTAGATATTCATAGGCATGTAAGGTTTtata > 2:2483483/1‑100 (MQ=255)
aaTATACTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATAc < 1:2779807/100‑1 (MQ=255)
tataCTAGCGGTTTTTTTTT‑TTTTTTTTTATTTTTATCAAAGCATGACTTTTTTCTTTGTGAGTTAGTTGATATTCATAGGCTTTTCCGGTTTTATACtt > 2:349508/1‑100 (MQ=255)
tataCTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACtt < 2:1852523/100‑1 (MQ=255)
ataCTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACttt < 1:2144513/100‑1 (MQ=255)
taCTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTg < 2:2565824/100‑1 (MQ=255)
taCTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTg < 2:1521835/100‑1 (MQ=255)
aCTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGc < 1:2420770/100‑1 (MQ=255)
cTAGCGGTTTTTTTTT‑TGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt > 2:95640/1‑100 (MQ=255)
cTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt > 2:39739/1‑100 (MQ=255)
cTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt > 1:2692710/1‑100 (MQ=255)
cTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt < 1:1501275/100‑1 (MQ=255)
cTAGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt < 1:2015324/100‑1 (MQ=255)
aGCGG‑TTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGa > 1:1055436/1‑100 (MQ=255)
|
TATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGA > NC_000913/4556663‑4556856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
