Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F244 I1 R1
|
118 |
120.6 |
6073099 |
93.5% |
5678347 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
119,744 |
(G)6→7 |
coding (464/855 nt) |
ampE → |
ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 119,738 | 1 | . | G | 95.2%
| 353.5
/ 8.5
| 103 | coding (458/855 nt) | ampE | ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base G (48/50); total (51/52) |
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 117 total aligned reads displayed.
GCAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑GGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGCATCAT > NC_000913/119641‑119829
|
gCAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gg < 2:909700/100‑1 (MQ=255)
cAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑ggg < 1:2014779/100‑1 (MQ=255)
cAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑ggg > 2:2665686/1‑100 (MQ=255)
aGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg < 2:2702294/100‑1 (MQ=255)
ggCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g < 1:739172/100‑1 (MQ=255)
ggCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCATGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g > 2:1829669/1‑100 (MQ=255)
gCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑g > 2:480836/1‑100 (MQ=255)
gCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑g > 1:1664772/1‑100 (MQ=255)
gCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑g > 2:1971691/1‑100 (MQ=255)
cTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑gg < 1:1817980/100‑2 (MQ=255)
tGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑gga > 1:1858196/1‑98 (MQ=255)
cgacgaACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑ggaac < 1:260557/100‑5 (MQ=255)
gacgaACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑gggg‑g‑ggaacc < 2:2674068/100‑6 (MQ=255)
cgaACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTg < 2:2622615/100‑1 (MQ=255)
cgaACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGCGGGGG‑G‑GAACCTg < 1:2038366/100‑1 (MQ=255)
aaCGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTggg > 1:1066628/1‑100 (MQ=255)
aCGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTgggg < 2:392302/100‑1 (MQ=255)
aCGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTgggg < 1:616144/100‑1 (MQ=255)
cGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGa > 2:1304329/1‑100 (MQ=255)
cGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGa > 1:479654/1‑100 (MQ=255)
gTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGAc > 2:1609685/1‑100 (MQ=255)
tGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGAcc > 2:2971636/1‑100 (MQ=255)
tGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGAcc < 1:2144159/100‑1 (MQ=255)
tGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGAcc < 1:2329355/100‑1 (MQ=255)
aGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGAcc < 2:2830004/98‑1 (MQ=255)
aGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCg < 1:1737064/100‑1 (MQ=255)
aTTTGCGTGAGCTGCAAAATGCATTGCTGGGGATTAACTTACGCTGTTATCTTGCACCGCCGTT‑TGGCATGGTTGT‑GGGG‑GCGCACATGGGGAccc > 2:1906286/1‑96 (MQ=255)
tGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGc > 1:911771/1‑100 (MQ=255)
tGCGTGAGCTGCAAAATGAATTGCTGTGGCTTAACTTTCGTTTTTATCTTGCAACGCTGTTCTGGC‑GACATGT‑GGGGAG‑GAACCTgggcg > 2:2757719/1‑88 (MQ=255)
gCGTGAGCTGCAAAATGCATTGCTGTCGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAGCCTGGGGACCCGTTACGCt < 2:1701900/100‑1 (MQ=255)
tGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGAt > 1:2880601/1‑100 (MQ=255)
gAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATg < 1:1411525/100‑1 (MQ=255)
aGCTGCAAAATGCATTGCTGTGGATTGACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑GGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATgg > 1:2851667/1‑100 (MQ=255)
cTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATgggg < 1:1061960/100‑1 (MQ=255)
tGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGt > 2:472261/1‑100 (MQ=255)
tGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGt > 2:2783182/1‑100 (MQ=255)
tGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGt > 2:2783171/1‑100 (MQ=255)
tGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGt < 2:2447482/100‑1 (MQ=255)
gCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTa < 1:97497/100‑1 (MQ=255)
gCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTa > 1:2349636/1‑100 (MQ=255)
gCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTa < 2:1267706/100‑1 (MQ=255)
gCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTa < 2:1318543/100‑1 (MQ=255)
cAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTa < 2:651304/99‑1 (MQ=255)
aaaaTGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATg < 2:2270585/100‑1 (MQ=255)
aaaaTGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATg > 2:1727207/1‑100 (MQ=255)
aaaaTGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATg > 2:1735297/1‑100 (MQ=255)
aTGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGt < 1:2270146/100‑1 (MQ=255)
gCATTGCGGTGGATTAGCTTTCGTTTTTAGCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCGGGGGACCCGTTACGCTGATGGGGTATGCGttt < 2:1234906/100‑1 (MQ=255)
ttGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTg < 1:1455619/100‑1 (MQ=255)
gCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCg < 2:2253656/100‑1 (MQ=255)
gCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCg < 1:147074/100‑1 (MQ=255)
gCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCg > 1:1012852/1‑100 (MQ=255)
cTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGt > 2:1876886/1‑100 (MQ=255)
cTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGt < 1:480841/100‑1 (MQ=255)
cTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGt < 1:796263/100‑1 (MQ=255)
tgtgGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTg < 1:1971709/100‑1 (MQ=255)
tgtgGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTg < 2:1709604/100‑1 (MQ=255)
gtgGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGc > 2:7227/1‑100 (MQ=255)
tgGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGACGGGGTATGCGTTTTTGCGTGCa < 2:1765829/100‑1 (MQ=255)
ggATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTCTGCGTTTTTGCGTGCAt > 2:2627880/1‑100 (MQ=255)
ggATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCAt > 1:195428/1‑100 (MQ=255)
ggATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCAt < 2:1957938/100‑1 (MQ=255)
gATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATg > 2:2317531/1‑100 (MQ=255)
aaCTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCaa < 1:1304342/100‑1 (MQ=255)
aaCTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCaa < 1:1496870/100‑1 (MQ=255)
aaCTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCaa < 1:1617451/100‑1 (MQ=255)
aaCTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCaa < 2:2247484/100‑1 (MQ=255)
cTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATa > 1:2971328/1‑100 (MQ=255)
cTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATa > 2:2660643/1‑100 (MQ=255)
ttCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATAct > 1:1130336/1‑100 (MQ=255)
tCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActg < 2:38271/100‑1 (MQ=255)
cGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActgg > 1:395473/1‑100 (MQ=255)
ttttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggc < 1:540065/99‑1 (MQ=255)
gTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggc < 1:1082082/100‑1 (MQ=255)
tttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggct < 1:1650986/100‑1 (MQ=255)
tttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggct > 2:2357386/1‑100 (MQ=255)
tttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggca > 2:540058/1‑99 (MQ=255)
tttttATCTTGCACCGCTGTTCTGGC‑TGATTGT‑GGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggctg < 1:1828335/100‑1 (MQ=255)
ttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggctg > 1:1390660/1‑100 (MQ=255)
ttttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggctg > 1:2214252/1‑100 (MQ=255)
tttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATActggctgg < 2:1012842/100‑1 (MQ=255)
ttATCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACtggctggc > 1:2341275/1‑100 (MQ=255)
aTCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGCGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGgcg > 2:2385336/1‑99 (MQ=255)
tCTTGCACCGCTGTTCTGGC‑TGCTTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGCTTTTGCGTGCATGGCAATACTGGCTGGcgcg > 2:650140/1‑100 (MQ=255)
tCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTGCGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGcgcg > 1:2278999/1‑100 (MQ=255)
tCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGcgcg < 1:921878/100‑1 (MQ=255)
tCTTGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGcgcg < 1:2122567/100‑1 (MQ=255)
tGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGata < 1:2492665/100‑1 (MQ=255)
tGCACCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGata < 2:1858180/100‑1 (MQ=255)
aCCGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCa > 1:1128430/1‑100 (MQ=255)
ccGCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAg > 2:908562/1‑100 (MQ=255)
gCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAg > 1:303603/1‑98 (MQ=255)
gCTGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGAc > 2:1094573/1‑100 (MQ=255)
tGTTCTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGCTGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGAcgc > 2:1413336/1‑100 (MQ=255)
cTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGca > 2:2644136/1‑100 (MQ=255)
cTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGca < 1:908570/100‑1 (MQ=255)
cTGGC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGca < 1:2460058/100‑1 (MQ=255)
ggC‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGcatc > 1:1799255/1‑100 (MQ=255)
c‑TGATTGTGGGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGcatcat > 1:298297/1‑100 (MQ=255)
cggATTGTGGGGG‑G‑GAACCTGGGCACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGcat < 1:2529645/95‑1 (MQ=255)
|
GCAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGC‑TGATTGT‑GGGG‑G‑GAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGCATCAT > NC_000913/119641‑119829
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
