Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I1 R1
|
59 |
169.8 |
8365175 |
96.8% |
8097489 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
458,807 |
T→C |
intergenic (+107/‑81) |
clpX → / → lon |
ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 458,807 | 0 | T | C | 99.3%
| 485.7
/ ‑4.8
| 140 | intergenic (+107/‑81) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (70/68); total (71/69) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.04e-01 |
Only 100 of 140 total aligned reads displayed.
CATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGT > NC_000913/458712‑458902
|
cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACg > 1:3295439/1‑100 (MQ=255)
aTACAATCAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGt > 1:2199615/1‑100 (MQ=255)
aCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTa < 1:398968/99‑1 (MQ=255)
cAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACa < 2:724365/100‑1 (MQ=255)
aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACAt > 1:3207870/1‑100 (MQ=255)
aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTATCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACAt > 1:2430951/1‑100 (MQ=255)
aTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATg < 1:3628543/100‑1 (MQ=255)
aTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATg > 1:3675749/1‑100 (MQ=255)
tAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGtt < 2:3050446/100‑1 (MQ=255)
tAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGt > 2:939129/1‑99 (MQ=255)
aGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTa < 1:1050347/100‑1 (MQ=255)
gTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTa > 2:1818151/1‑99 (MQ=255)
gTTAACCAAAAAGGGGGGATTATATCTCCCCTTTAATTTTTCCTCTATTCTCGGCATTGAATGTGGGGGAAACCTCCCCATATACCGACGTACATGTTaa > 2:295719/1‑100 (MQ=255)
ttAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAAt < 1:3013436/100‑1 (MQ=255)
ccAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTTTTTTCGTCTTCGAATGTGGGGGAAACATCTCCATATACGGACGTACATGTTacttga > 2:3287597/1‑94 (MQ=255)
ccAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGAt > 2:2657340/1‑100 (MQ=255)
ccAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGAt > 2:3437989/1‑100 (MQ=255)
aaaaaGGGGGGATTGTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGAt < 2:3621407/98‑1 (MQ=255)
aaaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGc < 2:4085260/100‑1 (MQ=255)
ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGa < 1:3264974/100‑1 (MQ=255)
gggggATTTTATCACCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGaa < 2:375706/100‑1 (MQ=255)
ggggATTTTATCTCCCCTTTAATTTTTTTTTTTTTTTTTACGTTGAATGTGGGGAAAACATTTTTATATACCGTCGTACATGTTAATTGATGTCTTGAAg > 2:488913/1‑100 (MQ=255)
ctggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAg < 1:618851/98‑1 (MQ=255)
gggATTTTATCTCCCCTTTAATTTTTTTTTTTTTTTTTTCGTTGAATGTGGGGAAAACATTTTTTTATACCGTCGTACATGTTAATAGTTCGCTTGaa > 2:1886260/1‑98 (MQ=255)
gggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGc < 1:1124321/100‑1 (MQ=255)
gggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGc < 1:1187896/100‑1 (MQ=255)
ggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAgag > 2:618847/1‑98 (MQ=255)
aTTTTATCTCCCCTTTAATTTTTTTTTTTTTTTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGcaca > 2:3403793/1‑100 (MQ=255)
aTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGcaca > 1:434923/1‑100 (MQ=255)
aTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGcaca > 1:3882290/1‑100 (MQ=255)
ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAg > 2:2293842/1‑100 (MQ=255)
tttATCTCCCCTGTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAg < 2:4125558/99‑1 (MQ=255)
tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAACGTGGGGGAACCATCCTCATATACCGACGTACATGTGAATAGATGGCGTGAAGCACAGTCg > 2:4157873/1‑100 (MQ=255)
aTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt < 2:3882247/100‑1 (MQ=255)
aTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGCTAATAGATGGCGTGAAGCACAGTCgt > 1:1827310/1‑100 (MQ=255)
tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg < 1:3117338/100‑1 (MQ=255)
tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg > 2:2460611/1‑100 (MQ=255)
ctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt < 2:2408939/100‑1 (MQ=255)
tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTc < 1:3586902/100‑1 (MQ=255)
ccccTTTAATTTTTTTTTTTTTTTCGGCGTTGAACGTGGGGGAAACATTCCCATATACCGACGTACATGTTAATAGATGTCGTGAAGCACAGTCgttt > 2:3811266/1‑96 (MQ=255)
ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa < 1:2902947/100‑1 (MQ=255)
ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa > 2:385205/1‑100 (MQ=255)
ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa > 2:1342262/1‑100 (MQ=255)
ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa > 2:2859305/1‑100 (MQ=255)
cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCAt > 1:2762867/1‑100 (MQ=255)
ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATc < 1:37782/100‑1 (MQ=255)
cTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt > 1:75812/1‑100 (MQ=255)
cTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt > 2:1631975/1‑100 (MQ=255)
tAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGAt < 1:600713/100‑1 (MQ=255)
ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc > 2:125169/1‑100 (MQ=255)
ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc < 1:650160/100‑1 (MQ=255)
ttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTg > 2:3672391/1‑100 (MQ=255)
ttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTg > 2:3888901/1‑100 (MQ=255)
tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTgg < 2:1799534/100‑1 (MQ=255)
ccTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGc > 1:3449581/1‑100 (MQ=255)
ctctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg > 2:1448471/1‑100 (MQ=255)
tctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCgg < 2:1968124/100‑1 (MQ=255)
tctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCgg < 2:434919/100‑1 (MQ=255)
ctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa < 2:3303610/100‑1 (MQ=255)
tATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGCTGGCGTGAAGCACAGTCGTGTCATCTGATTACCTCGCGGaa > 1:4076277/1‑100 (MQ=255)
ttCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAt < 1:1841925/100‑1 (MQ=255)
tctcGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAtt < 1:1580674/100‑1 (MQ=255)
tcGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa < 2:3286757/100‑1 (MQ=255)
cGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa < 2:353011/100‑1 (MQ=255)
cGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa < 1:3403831/100‑1 (MQ=255)
cGGCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa < 2:3237762/99‑1 (MQ=255)
ggCGTTGAATGTGGGGGAAACCTCCCCATATACCGACGTATATGTTAATAGATGGCGTGAAGCACAGTCGTGTCAGCTGATTACCTGGCGGAAATTAAAc < 2:3492346/100‑1 (MQ=255)
ggCGTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc < 1:2133202/100‑1 (MQ=255)
gTTGAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa > 2:743458/1‑100 (MQ=255)
gAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagag > 1:2644839/1‑100 (MQ=255)
gAATGTGGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagag > 2:1379411/1‑100 (MQ=255)
tgtgGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagaga < 1:1590695/100‑1 (MQ=255)
tgGGGGAAACATCCTCATATACCGACGTACATGTTAACAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGc < 2:2843838/100‑1 (MQ=255)
tgGGGGAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGc > 2:1818227/1‑100 (MQ=255)
gggggAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGct > 1:1288457/1‑100 (MQ=255)
ggggAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctc < 2:432370/100‑1 (MQ=255)
ggggAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctc > 1:1357351/1‑100 (MQ=255)
ggAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa > 2:2168423/1‑100 (MQ=255)
ggAAACAGCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct < 2:1300391/99‑1 (MQ=255)
gAAACATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTAt < 1:3891420/100‑1 (MQ=255)
aaCATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGa > 1:89462/1‑100 (MQ=255)
cATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAAt > 2:3491821/1‑100 (MQ=255)
cATCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAAt > 1:970698/1‑100 (MQ=255)
aTCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATc < 1:1654915/100‑1 (MQ=255)
aTCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATc > 2:455842/1‑100 (MQ=255)
aTCCCCATATACCGACGTACATGTTAATAGAGAGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCAGAAATTAAACTAAGAGAGAGCTCTATGaa < 2:3194570/98‑1 (MQ=255)
tCCCCATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATcc < 2:3207835/100‑1 (MQ=255)
gccATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCACCTGATTACCTGGCGGAAATTAAACGAAGAGAGAGCTCTAGGAATCCTg > 2:446121/2‑100 (MQ=255)
cccATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTg > 1:3301373/1‑100 (MQ=255)
cccATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTg > 2:2590770/1‑100 (MQ=255)
ccATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa > 2:754298/1‑100 (MQ=255)
cATATACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAg < 1:2183417/100‑1 (MQ=255)
atatACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc < 2:880194/100‑1 (MQ=255)
atatACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc < 1:3597424/100‑1 (MQ=255)
atatACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc > 2:610007/1‑100 (MQ=255)
atatACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc > 2:1045649/1‑100 (MQ=255)
atatACCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc < 2:1659269/100‑1 (MQ=255)
tataCCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCg > 1:762238/1‑100 (MQ=255)
tataCCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCg > 2:2615641/1‑100 (MQ=255)
ataCCGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGt > 2:2334722/1‑100 (MQ=255)
|
CATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGT > NC_000913/458712‑458902
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
