Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I1 R1
|
186 |
136.5 |
6958264 |
92.1% |
6408561 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,746,162 |
G→T |
L23L (CTG→CTT) |
yiaO → |
2,3‑diketo‑L‑gulonate‑binding periplasmic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,746,162 | 0 | G | T | 99.3%
| 502.8
/ ‑4.6
| 149 | L23L (CTG→CTT) | yiaO | 2,3‑diketo‑L‑gulonate‑binding periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (73/75); total (74/75) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 |
Only 100 of 156 total aligned reads displayed.
GAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACC > NC_000913/3746066‑3746258
|
gAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTtgc > 1:3190950/1‑99 (MQ=255)
aaaTGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGAAATATGAATAGCTGACCTGGCTGCATTCAGCACATATTCTCTtgcg > 1:3018480/1‑99 (MQ=255)
aaTGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTtgcggc > 2:930342/1‑100 (MQ=255)
aaTGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTtgcggc < 2:1043690/100‑1 (MQ=255)
ggATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGcaca > 2:2488696/1‑100 (MQ=255)
ttaattaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATc < 2:1227865/100‑1 (MQ=255)
aattaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCtt < 1:2796998/100‑1 (MQ=255)
attaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTTAGCACATCTTCTCTTGCGGCACAATCttt > 1:1666860/1‑100 (MQ=255)
attaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTTAGAACATCTTCTCTTGCGGCACAATCtt > 1:273919/1‑99 (MQ=255)
taaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCATCACATCTTCTCTTGCGGCACAATCTTTAc > 2:692557/1‑100 (MQ=255)
taaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTAc < 2:419742/100‑1 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAGTCTTTACg > 1:804872/1‑100 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg > 2:3150146/1‑100 (MQ=255)
aGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGttt > 1:1716082/1‑100 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc > 2:1123163/1‑100 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc > 2:1730324/1‑100 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc > 1:307502/1‑100 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCAATATTCATTGATGGCCTGGCTGCATTCAGCACATATTCTCTTGCGGCCCAATCTTTACGtt > 1:3143591/1‑98 (MQ=255)
aaaaTATTATGAAATTACGCTCTGTATCCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCgg < 1:1510904/100‑1 (MQ=255)
aaaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCgg < 2:923279/100‑1 (MQ=255)
aaaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCgg < 2:3014440/100‑1 (MQ=255)
aaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGt < 2:1716105/100‑1 (MQ=255)
atatTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTa < 2:75202/100‑1 (MQ=255)
atatTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTa > 1:1085898/1‑100 (MQ=255)
atatTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTa < 2:2236809/100‑1 (MQ=255)
atatTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTa > 2:885068/1‑100 (MQ=255)
atatTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTa < 1:28141/100‑1 (MQ=255)
tattatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTAt < 2:2525604/100‑1 (MQ=255)
attatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATg < 2:2119371/100‑1 (MQ=255)
tatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaa > 2:2670497/1‑100 (MQ=255)
tatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaa > 1:2139018/1‑100 (MQ=255)
atGAAATTACGCTCTGTAACCTACGCATTAGTCCTTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTGGGTTATGaaa > 1:2285673/1‑100 (MQ=255)
tgcacttACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTAACCACATCTTCTCTTGCGGCACAATATTTACGTTTCGGTTATGAAAc < 2:3305444/95‑1 (MQ=255)
tGAAATTACGCTCTGTAACCTACGCATTATTCATTGTTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAAc > 1:1502227/1‑100 (MQ=255)
tGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAAc > 2:2801853/1‑100 (MQ=255)
aaaTTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACAt < 2:1992518/100‑1 (MQ=255)
aaaTTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACAt > 2:748051/1‑100 (MQ=255)
aaaTTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACAt > 1:1455029/1‑100 (MQ=255)
aaaTTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGCCACAATCTTTACGTTTCGGTTATGAAAc > 1:569315/1‑98 (MQ=255)
aaTTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATc < 1:2646997/100‑1 (MQ=255)
cGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACaaa < 2:1499226/100‑1 (MQ=255)
cGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACaaa < 1:536549/100‑1 (MQ=255)
ctctGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAAcc > 1:2773735/1‑100 (MQ=255)
tAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTc > 2:1982958/1‑100 (MQ=255)
tAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTc > 2:3420102/1‑100 (MQ=255)
aaCCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCg > 1:1458039/1‑100 (MQ=255)
aCCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGc > 2:2199797/1‑100 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa < 1:744654/100‑1 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa > 2:1954617/1‑100 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa < 2:1753151/100‑1 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa > 2:1693913/1‑100 (MQ=255)
tACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAAc > 1:330753/1‑100 (MQ=255)
tACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAAc < 2:275708/100‑1 (MQ=255)
aCGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACa > 2:2637444/1‑100 (MQ=255)
gCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACata < 1:2985688/100‑1 (MQ=255)
gCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACata > 2:3079838/1‑100 (MQ=255)
gCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACata < 2:50648/100‑1 (MQ=255)
attattCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATAtt > 1:807709/1‑100 (MQ=255)
ttattCAGTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTg < 1:2331100/100‑1 (MQ=255)
ttCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcgg < 1:2372751/100‑1 (MQ=255)
ttCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcgg < 2:275409/100‑1 (MQ=255)
tCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggc < 2:133734/100‑1 (MQ=255)
cATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggcg > 2:2792606/1‑100 (MQ=255)
cATTGCTGGCCTGGCTACATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggcg < 1:440346/100‑1 (MQ=255)
aTTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGa > 2:1602152/1‑100 (MQ=255)
aTTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGa < 2:364049/100‑1 (MQ=255)
gCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaa > 2:1289929/1‑100 (MQ=255)
tggcctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaaaa < 2:1930914/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc > 1:2970732/1‑100 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc < 2:619480/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc < 1:609075/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc > 1:361665/1‑100 (MQ=255)
ctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCa < 2:1593393/100‑1 (MQ=255)
tggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCAAAAAAAAAATTCaa < 1:747325/100‑1 (MQ=255)
tggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGATTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCac < 1:1557427/100‑2 (MQ=255)
ggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt < 2:28382/100‑1 (MQ=255)
ggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt < 2:1776692/100‑1 (MQ=255)
cTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGa > 2:2124108/1‑100 (MQ=255)
cTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGa > 2:3295129/1‑100 (MQ=255)
ttCGGCACATCTTCTGTTGCGGCACATTCTTTACGTTTCGGTTATGAATCTTCACAAACCGACTCGCAACATATTGTGGCGAAAAAATTCAATGATTTAt > 1:2251868/1‑100 (MQ=255)
ttCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTAt > 1:1498768/1‑100 (MQ=255)
tCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATTAAACATCACAAACCGACTCGCAACATATTTCGGCGAAAAAATTCAATGATTTAtt > 1:1770896/1‑100 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg < 1:113275/100‑1 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg > 2:1224777/1‑100 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg > 2:359322/1‑100 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGc > 2:2416179/1‑100 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGc < 2:674642/100‑1 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGc > 2:1418127/1‑100 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGc < 2:3065191/100‑1 (MQ=255)
acaTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCAAAAAAATTCAATGATTTATTGCAgg > 1:2174517/1‑100 (MQ=255)
caTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGga > 1:594728/1‑100 (MQ=255)
caTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGga < 2:1085912/100‑1 (MQ=255)
caTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGga > 1:3236193/1‑100 (MQ=255)
cttctCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGgagag < 1:571697/100‑1 (MQ=255)
cttctCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGgagag < 2:3227073/100‑1 (MQ=255)
tctcTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGaa < 2:3408421/100‑1 (MQ=255)
ctctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAc < 2:2187630/100‑1 (MQ=255)
ctctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAc < 2:2392948/100‑1 (MQ=255)
tctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAcc > 2:1664029/1‑100 (MQ=255)
tctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAcc > 1:395666/1‑100 (MQ=255)
|
GAAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACC > NC_000913/3746066‑3746258
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
