Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I0 R1
|
328 |
102.7 |
5123138 |
93.4% |
4785010 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,746,162 |
G→T |
100% |
L23L (CTG→CTT) |
yiaO → |
2,3‑diketo‑L‑gulonate‑binding periplasmic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,746,162 | 0 | G | T | 98.8%
| 314.6
/ ‑3.8
| 95 | L23L (CTG→CTT) | yiaO | 2,3‑diketo‑L‑gulonate‑binding periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base T (54/38); total (54/41) |
| Fisher's exact test for biased strand distribution p-value = 1.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACC > NC_000913/3746067‑3746258
|
aaaTGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTtgcgg < 1:1418204/100‑1 (MQ=255)
aaTGGCTTAATTAAAAGGAAAATATTATGAAATCACGCTCTCTACCATACGCACTATTAATTGCTAGCCCGGCCGCATTCAGCACATCTTCTATgtcgg > 2:501005/1‑99 (MQ=255)
gATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACaa < 2:1158831/100‑1 (MQ=255)
gATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACaa > 1:2341977/1‑100 (MQ=255)
gATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTACTTGCCTGGCGGCATTCAGCACATCTTCTCTTGCGGCACaa > 2:777572/1‑100 (MQ=255)
aattaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCtt > 1:1967998/1‑100 (MQ=255)
aattaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCt < 2:2217214/99‑1 (MQ=255)
attaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCttt < 1:289566/100‑1 (MQ=255)
attaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCttt > 1:811559/1‑100 (MQ=255)
attaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCttt > 1:2095827/1‑100 (MQ=255)
ttaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTa < 1:1282635/100‑1 (MQ=255)
ttaaAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTa > 2:134512/1‑100 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg > 1:2091934/1‑100 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg > 1:459762/1‑100 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg < 1:442648/100‑1 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg < 1:2209437/100‑1 (MQ=255)
aaaaGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACg > 1:1415280/1‑100 (MQ=255)
aGGAAAATATTATGCAATTACGCCCTCTAACCTACTCAGCATTCATTGCTGGCCTTGCTGCATTCAGCACCTCTTCTCCAGCTGCACAATCTTTAc < 2:510781/96‑1 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGttcc > 2:1552754/1‑98 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc < 1:2053780/100‑1 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc > 2:1328650/1‑100 (MQ=255)
ggAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTc > 2:579605/1‑100 (MQ=255)
gAAAATATTATGAAATTACGCTCTGTAACCTAGGCATTATTCATTGATGGCCTGGCTGAATTCAGCACATCTTCTCTTGCGGCACAATCTTTACtttta > 2:1888113/1‑98 (MQ=255)
aaaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCgg < 1:457780/100‑1 (MQ=255)
aaaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCgg < 1:625845/100‑1 (MQ=255)
aaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGt < 2:171693/100‑1 (MQ=255)
aaaTATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGt < 1:952524/100‑1 (MQ=255)
aaTACTATAAAATTACTCTCTGTAACCTACGCCTTAATCGCTGCTGGCCTGGTCGCATTCACCATATGTTTTCTGGTGGCATAATCTATACGTTTCGCtt < 2:607763/100‑1 (MQ=255)
atatTATGAAATTACGCTCGGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACGATCTTTACGTTTCGGTTa < 1:2462431/100‑1 (MQ=255)
tattatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTCGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTAt < 2:740790/100‑1 (MQ=255)
ttatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGa > 2:1245803/1‑100 (MQ=255)
tatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaa < 2:1687274/100‑1 (MQ=255)
tatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaa < 2:2291592/100‑1 (MQ=255)
tatGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaa > 2:2035745/1‑100 (MQ=255)
atGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaaa > 1:850051/1‑100 (MQ=255)
atGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGaaa > 2:1349892/1‑100 (MQ=255)
tGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAAc < 1:529081/100‑1 (MQ=255)
gAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACa < 2:1415269/100‑1 (MQ=255)
gAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACa < 2:951689/100‑1 (MQ=255)
ttACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATcac > 2:2457310/1‑100 (MQ=255)
tctGTAACCTACGCATTATTCATTGCTGGCCTGCCTGCATTCAGCACATCTTCTCTTGCGGCACACTCTTTACGGTTCGGTTATGAAACATCACACAcc > 2:1227303/1‑99 (MQ=255)
tGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGAc < 1:1349901/100‑1 (MQ=255)
tAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTc > 1:1085056/1‑100 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa < 1:2121382/100‑1 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa < 1:289126/100‑1 (MQ=255)
ccTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCa > 1:816666/1‑100 (MQ=255)
tACTCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAAc < 1:1754060/100‑1 (MQ=255)
tACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAAc < 1:481145/100‑1 (MQ=255)
aCGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACa > 1:2006204/1‑100 (MQ=255)
cGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACat > 1:780568/1‑100 (MQ=255)
gCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACata > 2:673054/1‑100 (MQ=255)
tattCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgc > 1:1315584/1‑100 (MQ=255)
attCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcg < 1:823227/100‑1 (MQ=255)
aatCATTGCTGGCATGGCTGCATTCAGCACAACTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcg > 1:1728634/3‑100 (MQ=255)
ttCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcgg < 1:2128758/100‑1 (MQ=255)
tCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggc > 2:1819107/1‑100 (MQ=255)
tCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggc < 2:462596/100‑1 (MQ=255)
cATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggcg > 1:1279487/1‑100 (MQ=255)
cATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTgcggcg > 1:2328299/1‑100 (MQ=255)
ttGCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaa > 1:1610353/1‑100 (MQ=255)
gCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaa > 2:1916520/1‑100 (MQ=255)
gCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaa > 2:386740/1‑100 (MQ=255)
gCTGGCCTGGCTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaa > 1:2035863/1‑100 (MQ=255)
tggcctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGaaaaaa > 1:1237606/1‑100 (MQ=255)
gcctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAAtt < 1:803485/100‑1 (MQ=255)
gcctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAAtt < 1:2163933/100‑1 (MQ=255)
gcctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAAtt < 1:51491/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc < 2:1315575/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc > 1:1998335/1‑100 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTc < 2:758875/100‑1 (MQ=255)
cctggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTCCGGCGaaaaa > 2:749156/1‑96 (MQ=255)
ggcTGCATTCAGCACCTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt < 1:2515687/100‑1 (MQ=255)
ggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt > 2:682290/1‑100 (MQ=255)
ggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt > 1:414380/1‑100 (MQ=255)
ggcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt > 2:1358653/1‑100 (MQ=255)
gcTGTATTCATCACATCTTCTCTTGCGGCACAATCTTTACGTTTTGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAAt < 2:2506698/99‑1 (MQ=255)
gcTGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATg > 1:1990021/1‑100 (MQ=255)
tGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGAt > 2:1920148/1‑100 (MQ=255)
tGCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGAt > 1:2500755/1‑100 (MQ=255)
gCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGAtt > 2:627227/1‑100 (MQ=255)
gCATTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGAtt > 2:1303019/1‑100 (MQ=255)
aTTCAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTa > 2:208628/1‑100 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg > 1:2545768/1‑100 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg > 2:1514959/1‑100 (MQ=255)
cAGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTg > 1:785278/1‑100 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCACAACATATTGCGGCGAAAAAATTCAATGATTTATTGc < 1:9859/100‑1 (MQ=255)
aGCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTAGGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGc < 2:517687/100‑1 (MQ=255)
gCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCa < 2:183778/100‑1 (MQ=255)
gCACATCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCa > 2:1355804/1‑100 (MQ=255)
cacaTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAg < 1:1096568/100‑1 (MQ=255)
cacaTATTCTCTTGCGGCACACTCTTGACGTTTCGGTTATGAAACTTCACAAACCGACTCGCCACACATTGAGACGAGAAAAATCagagaatta > 2:2155910/1‑86 (MQ=255)
acaTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAgg < 2:1001971/100‑1 (MQ=255)
caTCTTCTCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGga > 2:1893624/1‑100 (MQ=255)
tcttctCTTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGgaga > 1:1662239/1‑100 (MQ=255)
ttctCATGCGGCACAATTTTTACGTTTCGGTTATGAAACATCACAAACCGACTCTCAACATATAGCGGCGAAAAAATTCAATGATTTATTGCAGgagag < 2:2472288/99‑1 (MQ=255)
tctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGTGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAcc > 1:2364795/1‑100 (MQ=255)
tctTGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAAc > 2:654377/1‑99 (MQ=255)
|
AAATGGATTAATTAAAAGGAAAATATTATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACC > NC_000913/3746067‑3746258
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
