Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,443,086 |
T→A |
100% |
N338Y (AAC→TAC) |
secY ← |
preprotein translocase membrane subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,443,086 | 0 | T | A | 96.0%
| 300.8
/ 0.8
| 98 | N338Y (AAC→TAC) | secY | preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base A (46/48); total (48/50) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 |
ATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAA > NC_000913/3442989‑3443181
|
aTTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGAGGAATTCCTGTTACAAATGCACCGGACTTCTTCAGTTTATCTGCTGTTTCACTCGGGTAGa > 2:386330/1‑100 (MQ=255)
ttACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGaa > 2:381765/1‑100 (MQ=255)
aCTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGaaaa < 2:2800000/100‑1 (MQ=255)
ctgtATCGATATACTTCGCCGTGTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAAc < 2:1934380/97‑1 (MQ=255)
cTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAAc > 2:2444428/1‑100 (MQ=255)
cTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAAc < 2:1863974/100‑1 (MQ=255)
cTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAAc < 2:1866449/100‑1 (MQ=255)
tCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACg < 1:17092/100‑1 (MQ=255)
ataCTTCGCCGTTTGTTTTCTCGGATGATTTTCTGTTTCAAATGCACCGGACTTCTTCAGGTTATCTGCTGGTGCACGCGGGTAGAAAACCAACGCCgtg < 1:633415/100‑1 (MQ=255)
ataCTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCgtg < 2:243031/100‑1 (MQ=255)
ataCTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTACCTGCTGTTTCACGCGGGTAGAAAACCAACGCCgtg > 2:1552945/1‑100 (MQ=255)
taCTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCgtgt > 1:2702706/1‑100 (MQ=255)
aCTTCGCTGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTTAGGTTATCTGCTGTTTTACGCGGGTAGAAAACCAACGCCGTGTa < 2:2868314/100‑1 (MQ=255)
aCTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTa > 1:2020289/1‑100 (MQ=255)
aCTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTa < 2:1270616/100‑1 (MQ=255)
cTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTACTGTTTCACGCGGGTAGAAAACCAACGCCGTGTag > 1:2793588/1‑100 (MQ=255)
ttCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTaga < 2:1600459/100‑1 (MQ=255)
tCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTagaa > 1:2741146/1‑100 (MQ=255)
cgtcGTTTGCTCTACAGGACGAAAACCTGGCACAAATGCACCGGACTTCTTCAGGTTATGTGCTGTTTCAAGCGGGTAGAAAACCAATACCGTGTagaag > 2:1585015/4‑100 (MQ=255)
cGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCATGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTagaan < 1:1479155/100‑2 (MQ=255)
cGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCTGGTAGAAAACCAACGCCGTGTagaag < 1:1850750/100‑1 (MQ=255)
gCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTagaa > 2:820437/1‑98 (MQ=255)
gCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGAAGAAAACCAACGCCGTGTagaaaa > 1:2876013/1‑98 (MQ=255)
gCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGATGTTTCACGCGGGTAGAAAACCAACGCCGTGTagaaga < 2:1866818/100‑1 (MQ=255)
gtgtGCTATCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAAc < 2:2759595/97‑1 (MQ=255)
gTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCAGCGGACTTCTTTAGGTTATCTGCTGTTTCACGCTGGTATAAATCCAACGCGGTTTAGAAGAAAc < 2:476455/100‑1 (MQ=255)
gTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAAc > 2:105659/1‑100 (MQ=255)
tttGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACa < 2:1096704/100‑1 (MQ=255)
ctctCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACagaag > 2:1432911/1‑100 (MQ=255)
tctcCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACagaaga > 1:1694736/1‑100 (MQ=255)
tcCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACagaagaag < 1:1346522/100‑1 (MQ=255)
tcCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAAAAAACAAACGCCGTGTAGAAGAAACagaagaag > 1:516409/1‑100 (MQ=255)
ccGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgat < 1:123488/100‑1 (MQ=255)
cGGACGAATTCCTTGTATAAATTCATCGGATTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgat < 1:1265931/99‑1 (MQ=255)
cGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgatg < 1:505045/100‑1 (MQ=255)
ggACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgatg > 2:357955/1‑99 (MQ=255)
ggACGAATTCCTGGTACAAATGCACCGACCTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACagaagaag > 2:2360584/1‑96 (MQ=255)
gACGAATTACGAGTACAAATGCAGCGGACTTCTTCAGGTTATCTGCTATTTCACGCGGGTAGAAAACCAAATCCGTATAGAAGAAACAGAAGAAgatgag < 2:1336413/100‑2 (MQ=255)
aCGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGAtt > 2:1462025/1‑100 (MQ=255)
cGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTg < 2:549924/100‑1 (MQ=255)
gAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCCACTCCGTGTAGAAGAAACAGAAGAAGATGATTGc < 2:200641/100‑1 (MQ=255)
gAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGc < 2:2893097/100‑1 (MQ=255)
gAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGc < 2:1554745/100‑1 (MQ=255)
gAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGc < 2:1659176/100‑1 (MQ=255)
aTTCCTGGTACAAATTCACCGGACTTATTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCTGTGTAGCAGAAACAGAAGAAGATGAtt < 2:1858521/96‑1 (MQ=255)
aTTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAg > 1:1430926/1‑100 (MQ=255)
aTTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGAGTAAAAGAAACAGAAGAAGATGATTGCAg > 1:1050200/1‑100 (MQ=255)
ccTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACg > 2:407809/1‑100 (MQ=255)
ccTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACg < 2:2470957/100‑1 (MQ=255)
ccTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACg > 2:406743/1‑100 (MQ=255)
cTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTACAGACg > 1:2999838/1‑99 (MQ=255)
tGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCa > 2:860039/1‑100 (MQ=255)
gTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGCGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATa < 2:737650/100‑1 (MQ=255)
tACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATag < 2:259203/100‑1 (MQ=255)
aCAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATaga < 1:716746/100‑1 (MQ=255)
aCAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATaga < 2:662668/100‑1 (MQ=255)
cAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATagag < 2:57897/100‑1 (MQ=255)
aaaTGCACCGGACTTCTTCAGGTTATCTGTTGTTTCACGCGGGTAGAAAACCAACGCCGTGTATAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGt < 1:2134380/100‑1 (MQ=255)
aaaTGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCTGACGCATAGAGt < 1:1999199/100‑1 (MQ=255)
aaaTGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGGAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGt < 1:1239720/100‑1 (MQ=255)
aaTTCACCGGACTTCTTCAGGTGATCTGCTGTTTCACGCGGGTAGAAATCCAACGCCGTGCAGAAGAAACAGAAGAAGATGATTGCAGACGCATagag < 2:2928961/98‑1 (MQ=255)
aaTGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGAAGACGCATAGAGTa > 1:2275728/1‑100 (MQ=255)
aaTGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAAAGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTa > 2:2018413/1‑100 (MQ=255)
acgaCCGGGTTTCTTCAGGTGATCTGCTGTATCACGCGGGTAGACAGCCAACGCTGTGTAGAAGAAACATAAGATGATGTTTGCAGACGCATAGAGt < 2:181973/94‑1 (MQ=255)
cACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATAATTGCAGACGCATAGAGTAacac > 1:1229435/1‑100 (MQ=255)
aCCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAAcaca < 2:1177604/100‑1 (MQ=255)
ccGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt > 1:1156784/1‑100 (MQ=255)
ccGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGAAGCATAGAGTAACACAt > 2:1775246/1‑100 (MQ=255)
ggACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATaa < 1:868692/100‑1 (MQ=255)
gACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATaaa > 1:1541991/1‑100 (MQ=255)
cttcttCAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGc > 2:2378359/1‑100 (MQ=255)
cttcAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCgg > 2:93242/1‑99 (MQ=255)
cttcAGGTTATCTGCTGTTTAACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGAAACACATAAAGc > 2:1602255/1‑97 (MQ=255)
ttcAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGtt < 1:344669/100‑1 (MQ=255)
tcAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTg < 1:1221377/100‑1 (MQ=255)
cAGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGc < 1:2436133/100‑1 (MQ=255)
agttgaTCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATTGAGTATCACATAAAGCGGTTGcc < 2:2689409/95‑1 (MQ=255)
aGGTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACAAATAAAGCGGTTGcc > 1:2340281/1‑100 (MQ=255)
aGGTTATCTGCTGTATCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGcc < 2:1722532/100‑1 (MQ=255)
gTTATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCa < 1:1988569/100‑1 (MQ=255)
tATCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAgg < 1:881094/100‑1 (MQ=255)
aTCTGCTGTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGc < 1:1717637/100‑1 (MQ=255)
ctgctgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATAGAAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTg > 1:1811939/1‑100 (MQ=255)
tgctgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTg < 1:1479485/99‑1 (MQ=255)
tgctgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGc > 1:2987246/1‑100 (MQ=255)
tgctgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGc > 1:979155/1‑100 (MQ=255)
tgctgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGc > 2:2425851/1‑100 (MQ=255)
tgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCaaa > 2:2501502/1‑100 (MQ=255)
tgTTTCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCaaa > 1:1935629/1‑100 (MQ=255)
gTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAAt > 2:932736/1‑100 (MQ=255)
tttCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATa > 2:2903681/1‑100 (MQ=255)
tttCACGCGGGTAGAAAACCAACGCCGAGTAGAAGAAACATAAGAAGATGATTGCAGACGCAAAGAGTAACACATAAAGCGGATGCCAAGGATGAAAATa > 2:159309/1‑100 (MQ=255)
tCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACa > 2:2609175/1‑100 (MQ=255)
tCACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGATGCCCAGGCTGCAAATACa > 1:1406768/1‑100 (MQ=255)
cACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAg > 1:1265620/1‑100 (MQ=255)
cACGCGGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAg > 2:2601331/1‑100 (MQ=255)
cgGGTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGaa > 1:2850173/1‑100 (MQ=255)
gggTAGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGaaa < 2:2102203/100‑1 (MQ=255)
|
ATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAA > NC_000913/3442989‑3443181
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
