Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,541,962 |
T→G |
100% |
I519S (ATC→AGC) |
feoB → |
ferrous iron transporter protein B and GTP‑binding protein; membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,541,962 | 0 | T | G | 99.3%
| 410.2
/ ‑5.7
| 117 | I519S (ATC→AGC) | feoB | ferrous iron transporter protein B and GTP‑binding protein; membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (51/65); total (51/66) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 |
Only 100 of 124 total aligned reads displayed.
CATGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGATCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCGTCCGTCA > NC_000913/3541864‑3542057
|
cATGGAGCTGCCGGTCTACCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGatt > 1:357744/1‑99 (MQ=255)
aTGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTTATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGagca < 1:1160141/100‑1 (MQ=255)
aTGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGagca < 2:172463/100‑1 (MQ=255)
gAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGagcatca > 2:325925/1‑100 (MQ=255)
gAGTTGCCGGTCTATCATGTACCACACGCTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGagcatc < 2:480450/99‑1 (MQ=255)
tGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGt > 1:191329/1‑100 (MQ=255)
gCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTc < 2:49796/100‑1 (MQ=255)
ccGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCa > 1:2379819/1‑100 (MQ=255)
ccGGTCTATCATGTAACACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCa < 1:686971/100‑1 (MQ=255)
cGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAg > 2:1249800/1‑100 (MQ=255)
cGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAg < 2:1103869/100‑1 (MQ=255)
ggTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGc > 2:1046535/1‑100 (MQ=255)
ggTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTACGTGCTGGTAAAGTGAGCATCATCGTCAGc > 1:93480/1‑100 (MQ=255)
tATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCAttt > 2:251258/1‑100 (MQ=255)
tCATTTTCCACACTTTAAGATCCTTATTATCCAGACCTGGCAGTGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTc < 1:1034956/100‑1 (MQ=255)
aTGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCt > 1:2982260/1‑100 (MQ=255)
tGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGTGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCtn < 2:3021965/100‑2 (MQ=255)
tGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTg > 2:215107/1‑100 (MQ=255)
gTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGa < 2:857403/100‑1 (MQ=255)
gTACCACACGTTAAAAGCCTGATTATCAAGACCTGGCAGCGTCTGAAAGGCTTCGATCTGCGAGCTGGTAAAGTGAGCATCATCGACAGCATTTTCCTGa > 2:1037801/1‑100 (MQ=255)
tACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAg > 2:2684120/1‑100 (MQ=255)
tACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAg < 1:2668563/100‑1 (MQ=255)
ccACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAgcg > 1:2558149/1‑100 (MQ=255)
ccACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAgcg > 2:2326790/1‑100 (MQ=255)
ccACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAgcg > 1:1800496/1‑100 (MQ=255)
acacGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCt < 2:2539089/100‑1 (MQ=255)
acacGTTAAAAAACTGATTATGCGGATCTGCCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAATGTATGCATCATTGTCAGCATTGTCCTGGGCGCt < 2:3037717/100‑1 (MQ=255)
cacGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGTTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCtt < 2:2435611/100‑1 (MQ=255)
acGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAGAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCttt < 2:3018017/100‑1 (MQ=255)
acGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCttt < 2:198703/100‑1 (MQ=255)
cGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGTCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCtttn < 2:2591957/100‑2 (MQ=255)
gTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCa < 1:325928/100‑1 (MQ=255)
gTTAAAAGCCTGATTAGCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCa < 2:2982227/100‑1 (MQ=255)
ttAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCaa < 2:2492337/100‑1 (MQ=255)
aaaaGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACa > 1:1931667/1‑100 (MQ=255)
aaaaGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACa < 2:1934733/100‑1 (MQ=255)
aaaaGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACa < 1:201827/100‑1 (MQ=255)
aaGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGc > 2:2147582/1‑100 (MQ=255)
aaGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGc > 1:953273/1‑100 (MQ=255)
aGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCt < 2:953267/100‑1 (MQ=255)
cTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTtct < 1:923843/100‑1 (MQ=255)
gATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCg < 1:2852108/100‑1 (MQ=255)
gATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTAAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCg > 2:1248696/1‑100 (MQ=255)
aTTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGc < 1:1404945/100‑1 (MQ=255)
aTTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGc < 1:2119408/100‑1 (MQ=255)
tATCCAGACCTGGCAGCGTCTGAAAGTCTTCGTTCTGTGTGTTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTg < 1:2500261/100‑1 (MQ=255)
tATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTg < 2:1823623/100‑1 (MQ=255)
cAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGc > 2:1606211/1‑99 (MQ=255)
cAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCAATTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCg > 1:2508193/1‑100 (MQ=255)
aGACCTGGCAGCGTCTGGAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCgg < 1:2381130/100‑1 (MQ=255)
aGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCgg < 2:1051790/100‑1 (MQ=255)
gACCTGGCAGCGTCTGAAAGGCTTCTTTCTGCGTTCTGGTAAAGTGAGCAGCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCgg < 2:1538194/99‑1 (MQ=255)
ccTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGaa < 1:2951396/100‑1 (MQ=255)
cTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGan < 2:526296/99‑2 (MQ=255)
tGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATTGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGaaaa < 1:793792/100‑1 (MQ=255)
tGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCCCGCTCAGCGAGaagc < 1:1890871/100‑3 (MQ=255)
tGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCCCGCTCAGCGAGaagc < 2:2676874/100‑3 (MQ=255)
ggCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAAt > 2:369576/1‑100 (MQ=255)
gCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAAtc < 2:2629672/100‑1 (MQ=255)
aGCGTCTGTAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCCCGCTCAGCGAGaagctgt < 1:2028735/99‑6 (MQ=255)
gTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGa < 1:1439528/100‑1 (MQ=255)
gTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGa < 1:117439/100‑1 (MQ=255)
gTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCATTCAACAGCTTCTCGCTAAGCGGGAAAAtcgtc > 1:2800823/1‑98 (MQ=255)
cTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATa < 2:36295/100‑1 (MQ=255)
cTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATa > 2:2797955/1‑100 (MQ=255)
cTGAAAGGCTTCGTTCTGCGAGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATa > 2:1855632/1‑100 (MQ=255)
tGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATaa > 1:2080858/1‑100 (MQ=255)
gAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAAc > 1:2192466/1‑100 (MQ=255)
aaaGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACa < 1:2017673/100‑1 (MQ=255)
aGGCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATc > 1:230250/1‑100 (MQ=255)
ggCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCa < 2:3014690/100‑1 (MQ=255)
gCTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCaa > 1:2591116/1‑100 (MQ=255)
cTTCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAAc < 1:2391294/100‑1 (MQ=255)
ttCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACg < 2:2417089/100‑1 (MQ=255)
tCGTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACg < 2:1806975/99‑1 (MQ=255)
gTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACt > 2:2409017/1‑100 (MQ=255)
gTTCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACt < 2:1904539/100‑1 (MQ=255)
tCTGCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCg > 2:2833508/1‑100 (MQ=255)
tGCGTGCTGGTAAAGTGAGAATCATCGTCAGCATTTTCCTGAGCGGTTTCAAAAGCTTCTCGCTTAGCGGAAAAATCGTCTATAACATCAACGACTCgg > 2:901810/1‑99 (MQ=255)
gCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGgcg > 1:1965983/1‑100 (MQ=255)
gCGTGCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGgcg > 1:303261/1‑100 (MQ=255)
gCTGGTAAAGTGATCAGCATCGTCAGCATTTTACTGAGCGCGTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGAGCTgg < 2:858354/100‑1 (MQ=255)
gCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTgg > 1:2118402/1‑100 (MQ=255)
gCTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTgg < 1:1167769/100‑1 (MQ=255)
cTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGc > 2:1431602/1‑100 (MQ=255)
cTGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGc > 2:2124438/1‑100 (MQ=255)
tGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcg < 1:1248708/100‑1 (MQ=255)
tGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcg < 2:2751727/100‑1 (MQ=255)
tGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcg < 2:255332/100‑1 (MQ=255)
tGGTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcg < 2:1346731/100‑1 (MQ=255)
ggTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgt > 2:270928/1‑100 (MQ=255)
ggTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgt > 2:1303171/1‑100 (MQ=255)
gTAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACCACTCGgcgc > 2:2437698/1‑93 (MQ=255)
tAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgtcc < 1:1106112/100‑1 (MQ=255)
tAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgtcc > 2:2787057/1‑100 (MQ=255)
tAAAGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATAGTCGATAACATCAACGACTCGGCGCTGGcgtcc > 1:1760123/1‑100 (MQ=255)
aaaGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACTTCAACGACTCGGCGCTGGcgtccg < 2:181189/100‑1 (MQ=255)
aaaGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgtccg < 2:2307909/100‑1 (MQ=255)
aGTGAGCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACGGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGcgtccgtc < 2:433833/100‑1 (MQ=255)
gTGAGCATCATAGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCGTCCGTCa < 2:1404598/100‑1 (MQ=255)
|
CATGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGATCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCGTCCGTCA > NC_000913/3541864‑3542057
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
