Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,503,627 |
A→G |
31.5% |
intergenic (‑196/‑431) |
insG ← / → yjhB |
IS4 transposase/putative MFS transporter, membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,503,627 | 0 | A | G | 31.5%
| 156.2
/ 101.4
| 133 | intergenic (‑196/‑431) | insG/yjhB | IS4 transposase/putative MFS transporter, membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (43/47); new base G (21/20); total (66/67) |
| Fisher's exact test for biased strand distribution p-value = 8.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
GTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTG > NC_000913/4503528‑4503726
|
gtgtTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGta < 2:1465584/100‑1 (MQ=255)
tgtTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGtat < 2:2932195/100‑1 (MQ=255)
gtTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGtata < 2:3043872/100‑1 (MQ=255)
gTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAg < 2:666154/100‑1 (MQ=255)
gTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAg < 1:2547071/100‑1 (MQ=255)
gTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAg > 1:1680925/1‑100 (MQ=255)
tAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAgg > 2:2353116/1‑100 (MQ=255)
tAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAgg < 2:1266362/100‑1 (MQ=255)
tAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAgg < 1:491634/100‑1 (MQ=255)
tAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAgg < 1:638163/100‑1 (MQ=255)
tAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGAATTGCTTGTTTTTTGATCTGGTATAACAgg > 1:1959963/1‑100 (MQ=255)
tAACAAACTATCAGATACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACa > 2:917227/1‑98 (MQ=255)
aaCAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGt < 2:954175/100‑1 (MQ=255)
aaCAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGt > 2:1532469/1‑100 (MQ=255)
aaCAAACTATCAGATAAAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGt < 2:2507609/100‑1 (MQ=255)
aCAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGta < 1:492086/100‑1 (MQ=255)
aCAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGta < 2:2153784/100‑1 (MQ=255)
aCAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGta < 1:1295481/100‑1 (MQ=255)
tATCAGCTTCAAAAATATGCTCAATTTTTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAgg < 1:1330050/100‑1 (MQ=255)
tATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGTGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAgg < 2:2093493/100‑1 (MQ=255)
tATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAgg < 1:938886/100‑1 (MQ=255)
aTCAGCTACAAAAATATGCACAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTAGTATAACAGGTATAAAg > 2:283443/1‑98 (MQ=255)
cAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGTTGTAACAGTTATAAAGGtat > 2:467630/1‑100 (MQ=255)
aGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGtata > 1:2344689/1‑100 (MQ=255)
gCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATAc < 2:1374028/100‑1 (MQ=255)
gCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATAc > 1:2719241/1‑100 (MQ=255)
cTACAAAAATATGCTCAATTTGTTACATCAGTAACAAAACGCGTTTTGTTATGTGGATTTCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATAc < 2:97253/99‑1 (MQ=255)
tACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAg > 1:1728251/1‑100 (MQ=255)
tACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAg > 1:1341631/1‑100 (MQ=255)
aaaTTTGTTTAATTTGTGAGATCTGTAACAATACGCGTTTTGTTATGTGTATTGCTTGTTTTTTGATCTTTTATATCAGGTATAAAGGTATACAGAAAAg < 2:1484027/100‑1 (MQ=255)
aaaTATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAg < 2:1728231/100‑1 (MQ=255)
tGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAg < 2:552335/100‑1 (MQ=255)
gCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGa > 2:1657931/1‑100 (MQ=255)
cTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGaa > 1:2633128/1‑100 (MQ=255)
cTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGaa > 1:1635103/1‑100 (MQ=255)
aTTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATAc > 2:2533635/1‑100 (MQ=255)
aTTTGTGAAATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATAc < 1:1259630/100‑1 (MQ=255)
ttGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTg < 1:2852739/100‑1 (MQ=255)
tgACATCAGTAAGAAAACGCGTTTTGTTATGTAGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGc < 2:2700285/98‑1 (MQ=255)
aatccacatAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCaaa > 1:553315/9‑100 (MQ=38)
cATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAgg < 2:2752479/100‑1 (MQ=255)
aTCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGa < 2:696318/100‑1 (MQ=255)
cAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGaaa > 1:106473/1‑100 (MQ=255)
gTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAAc > 1:2578738/1‑100 (MQ=255)
tAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACa < 1:1662519/100‑1 (MQ=255)
tAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAAAAAGTATAAAAGTATACAGAAAAGCAAAGAAATAATGCAAAGGAAAACa > 1:421820/1‑100 (MQ=38)
aaCAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACa < 2:925347/99‑1 (MQ=255)
aaCAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAg > 2:2430407/1‑100 (MQ=255)
cAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCt > 1:2081139/1‑100 (MQ=255)
aaaaCGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCta > 2:258125/1‑100 (MQ=255)
aaCGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCtata < 1:1543862/100‑1 (MQ=255)
cgcgTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAAc > 2:1542702/1‑100 (MQ=255)
cgcgTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAAc < 2:1341619/100‑1 (MQ=255)
gTTTTGTTATGTGGATTGCTTTTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAGGAAATACTGCAAAGGAAAACAGCTATAACg < 2:1918036/98‑1 (MQ=255)
gTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTa < 2:1298008/100‑1 (MQ=255)
tttGTTATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAg < 2:295516/100‑1 (MQ=255)
ttGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGc < 1:2918788/100‑1 (MQ=255)
ttATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTaa > 1:1060302/1‑100 (MQ=255)
tATGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTaaa < 1:1198880/100‑1 (MQ=255)
aTGTGGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAg < 2:2362147/100‑1 (MQ=255)
tgtgGATTGCTTGTTTTTTTATTTTTTATAAAAGGGAAAAAGGTATACAGAAAAGCAAAGAAATAGTGCAAACGAAAACAGCTATAACCTAAGCTAAAGt > 2:2400283/1‑100 (MQ=255)
tgtgGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGt > 2:1284224/1‑100 (MQ=255)
tgtgGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGt > 2:1810441/1‑100 (MQ=255)
tgtgGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGt > 1:1973262/1‑100 (MQ=255)
tgtgGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGt < 1:983655/100‑1 (MQ=255)
gtgGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTACAAAGGAAAACAGCTATAACGTAAGCTAAAGta > 1:353360/1‑100 (MQ=255)
gtgGATTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAACACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGta < 2:1607471/100‑1 (MQ=255)
ggATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGtaat < 2:1476266/100‑1 (MQ=255)
gATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGtaata < 1:2406272/100‑1 (MQ=255)
aTTGCTTGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGtaataa > 1:2459780/1‑100 (MQ=255)
ttGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACctct > 1:2645074/1‑100 (MQ=255)
ttGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACctct > 1:2732150/1‑100 (MQ=255)
tGTTTTTTTTTTTTGTTTAACAGGGATAAAGGTATACAGAAAAGCAAAGAAATACTGGAAAGGAAAACAGCTATAACGTAAGCTAAAGTTATAACctct > 2:1507627/1‑99 (MQ=255)
tGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc < 2:1716313/100‑1 (MQ=255)
tGTTTTTTGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc < 1:2779594/100‑1 (MQ=255)
tGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc < 1:2279600/100‑1 (MQ=255)
tGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc < 2:2685949/100‑1 (MQ=255)
tGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc > 2:1429269/1‑100 (MQ=255)
tGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCtctc < 2:1827784/100‑1 (MQ=255)
ttttttGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAg < 2:1264047/100‑1 (MQ=255)
ttttttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAg < 2:106472/100‑1 (MQ=255)
ttttttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAg > 1:321156/1‑100 (MQ=255)
ttttttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATAATGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTATCAg > 2:2527790/1‑100 (MQ=255)
tttttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGt < 1:379456/100‑1 (MQ=255)
ttttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTc > 2:259015/1‑100 (MQ=255)
ttttGATCTAGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTc < 2:1031275/100‑1 (MQ=255)
ttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCtt < 1:523419/100‑1 (MQ=255)
ttGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCtt < 2:1924589/100‑1 (MQ=255)
tGATCTGGTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCttt > 2:1411313/1‑100 (MQ=255)
tGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCtt > 1:349140/1‑99 (MQ=255)
gATCTGGTGTAACAGGCATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTc > 2:1835863/1‑100 (MQ=255)
gATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTc < 2:524736/100‑1 (MQ=255)
aTCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTcc < 1:1601958/100‑1 (MQ=255)
aTCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTcc < 2:1027481/100‑1 (MQ=255)
aTCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTcc < 1:1095686/100‑1 (MQ=255)
ggTGTAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCAt < 2:900976/100‑1 (MQ=255)
ggTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCAt < 2:1930431/100‑1 (MQ=255)
ggTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCAt > 1:2056037/1‑100 (MQ=255)
ataACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTg < 1:2408473/100‑1 (MQ=255)
ataACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTg < 1:587662/100‑1 (MQ=255)
|
GTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTG > NC_000913/4503528‑4503726
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
