Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,490,088 |
A→G |
54.2% |
G31G (GGT→GGC) |
argD ← |
bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,490,088 | 0 | A | G | 54.2%
| 55.3
/ 200.3
| 169 | G31G (GGT→GGC) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (35/42); new base G (50/41); total (85/84) |
| Fisher's exact test for biased strand distribution p-value = 2.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 |
Only 100 of 172 total aligned reads displayed.
CACCAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCATGA > NC_000913/3489989‑3490187
|
cACCAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGa > 2:2737571/1‑100 (MQ=255)
ccAGCGCAGGCTGGGAATGGCCCAGCTCCGTAACTGCAATGCCACCCGCGAAATCGACAGAGTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGcc < 1:3738950/100‑1 (MQ=37)
ccAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGcc > 2:3944442/1‑100 (MQ=255)
cAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCt > 1:2938590/1‑100 (MQ=255)
gcgcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCGGATTCGGCTGCCCTGGCCttt < 2:4070228/100‑1 (MQ=255)
cAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc > 2:2418771/1‑100 (MQ=255)
aGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAcc < 2:1864465/100‑1 (MQ=255)
ggacgacAATGGCCCAACGCCATAACTCCAATGCCCCCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCACTGGCCTTTTACCg < 1:2183310/94‑1 (MQ=255)
gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 2:1681390/100‑1 (MQ=255)
gATGGCAATGGCCCAACGCCGAAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCgg < 1:2666455/100‑1 (MQ=255)
ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAAt < 2:2661045/100‑1 (MQ=255)
ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAAt > 2:1401620/1‑100 (MQ=255)
ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAAt < 1:2691694/100‑1 (MQ=255)
gCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATa < 2:4035538/100‑1 (MQ=255)
aTGGCCCAACGCCGTCACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAAc < 2:4213319/100‑1 (MQ=255)
aTGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAAc < 1:3237903/100‑1 (MQ=255)
ttgCCCAACGCCGTAACTGCCATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATCCGGCGGCCCTGACCTTTTACCGAAAAAAAc < 1:4264250/97‑1 (MQ=255)
gCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAActct > 2:788152/1‑100 (MQ=255)
gCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAActct > 2:577155/1‑100 (MQ=255)
cccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCATATTCGCCTGCCCTGGCCTTTTACCGGAATAAACTCTg > 1:2873781/1‑100 (MQ=255)
cccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTg > 2:2378472/1‑100 (MQ=255)
ccAACGCCGTAACTGCGATGCCACGCGCGAAATCGACAGATTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGc < 1:3692569/100‑1 (MQ=255)
ccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGc < 1:591430/100‑1 (MQ=255)
aaCGCCGTAACTGCAATGCCACCCGCGAAATCGCCATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCg < 2:1065556/100‑1 (MQ=255)
gCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAg < 1:2401918/100‑1 (MQ=255)
gCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAg > 2:2231840/1‑100 (MQ=255)
gCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAg > 1:1123592/1‑100 (MQ=255)
ccGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGc < 1:1368692/100‑1 (MQ=255)
ccGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGc > 1:2240664/1‑100 (MQ=255)
cGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCa < 2:3072510/100‑1 (MQ=255)
tAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATa > 2:2038293/1‑100 (MQ=255)
gCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATc > 2:2002196/1‑99 (MQ=255)
cAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCgg < 2:2785646/100‑1 (MQ=255)
cAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCgg < 1:1624222/100‑1 (MQ=255)
cAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCgg < 1:1623277/100‑1 (MQ=255)
aTGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCa > 2:3703809/1‑100 (MQ=255)
gCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAgg < 2:3115677/100‑1 (MQ=255)
ccACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAGATCggaagag > 1:2521023/1‑95 (MQ=255)
cACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGAt < 2:1432556/100‑1 (MQ=255)
cACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGAt > 1:3410520/1‑100 (MQ=255)
cccGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCa > 1:3904832/1‑100 (MQ=255)
cccGCGAAATCGACATACTCCTTGCCTTGCTCATCCCACATTCGGCTGCCCTGACCTTTTCCCGGAATAAACTCTGCCGGCGCATAAATCGGCAGGATc < 1:2994407/99‑1 (MQ=255)
cgcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACt > 2:359730/1‑100 (MQ=255)
cgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTc < 2:2596493/100‑1 (MQ=255)
cgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTc < 2:3793165/100‑1 (MQ=255)
aaaTCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCAt > 2:3608974/1‑100 (MQ=255)
aaaTCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCATGGCCTTTTACCGGAATAAACTCTGCCGGAGCATACATCGGCAGGAt > 1:4087018/1‑92 (MQ=255)
aTCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCg < 1:529101/100‑1 (MQ=255)
cGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaa > 2:3367001/1‑100 (MQ=255)
gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa > 1:1172471/1‑100 (MQ=255)
gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGTCGGAGCATAAATCGGCAGGATCACTTCATCGaaa < 2:3349879/100‑1 (MQ=255)
cATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGt > 2:2654973/1‑100 (MQ=255)
cATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTGACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAg < 2:657531/99‑1 (MQ=255)
cTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGCAAGTcg > 1:2928497/1‑98 (MQ=255)
cTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcg < 2:3173745/100‑1 (MQ=255)
cTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcg > 2:1316162/1‑100 (MQ=255)
tCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgc > 1:973369/1‑98 (MQ=255)
ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 2:61790/1‑100 (MQ=255)
ccttgccttgCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 1:2769508/1‑100 (MQ=255)
ccttgccttgCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg < 2:2082875/100‑1 (MQ=255)
ccttgccttgCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg < 1:3898469/100‑1 (MQ=255)
tgccttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCgtgt < 2:2674877/100‑1 (MQ=255)
gccttgcTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTa > 2:215607/1‑100 (MQ=255)
cttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 2:631101/100‑1 (MQ=255)
cttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 2:1499562/100‑1 (MQ=255)
cttgcTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 1:194764/100‑1 (MQ=255)
ttgcTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAtt > 1:3449073/1‑100 (MQ=255)
gcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGc > 1:4197138/1‑100 (MQ=255)
gcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGc < 1:3809521/100‑1 (MQ=255)
cTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCt > 2:1456716/1‑100 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg < 1:1460360/100‑1 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg > 1:1729903/1‑100 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg < 2:2979487/100‑1 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg < 2:3717121/100‑1 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg < 1:4220673/100‑1 (MQ=255)
tGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtg > 1:4225324/1‑100 (MQ=255)
aTCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTCCATCGAAAGTCGCGCGTGTAATTGCtgtt > 1:2565232/1‑100 (MQ=255)
aTCCCAGATTCGGCTGCCCTGGCCGTTTCCCGGAATAAACGCCGCCGGAGCATAAATCGGCAGGATCACCTCATCGAAAGTCGCGCGTGTAATTGCtgtt < 1:693631/100‑1 (MQ=255)
nccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttg > 1:3526721/2‑100 (MQ=255)
cccAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttg < 2:3585563/100‑1 (MQ=255)
ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttgt > 2:3263064/1‑100 (MQ=255)
aGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGGGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTc < 2:2725216/100‑1 (MQ=255)
aGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTc < 2:1271047/100‑1 (MQ=255)
gATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCa < 1:313852/100‑1 (MQ=255)
aTTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCaa < 2:3813638/100‑1 (MQ=255)
cGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTg > 2:3053243/1‑100 (MQ=255)
cGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTg < 1:3189933/100‑1 (MQ=255)
cGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTg < 2:1169601/100‑1 (MQ=255)
ggCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGc > 2:2936372/1‑100 (MQ=255)
cTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCa < 2:2763772/100‑1 (MQ=255)
cTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCa < 2:3335972/100‑1 (MQ=255)
cTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCa > 2:186015/1‑100 (MQ=255)
gCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc > 1:1566563/1‑100 (MQ=255)
gCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc < 2:1124240/100‑1 (MQ=255)
cccTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtct > 1:357065/1‑100 (MQ=255)
cccTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtct > 1:1242353/1‑100 (MQ=255)
cccTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtct < 1:1133423/100‑1 (MQ=255)
cccTGACCGTTTACCGGACTAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTACTTGCAGTTTGTTTATTTGACAtat > 1:3188692/1‑98 (MQ=255)
ccTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtctc > 2:138133/1‑100 (MQ=255)
aCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCATGa < 1:1961686/100‑1 (MQ=255)
|
CACCAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCATGA > NC_000913/3489989‑3490187
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
