Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,310,468 |
T→G |
41.1% |
E171D (GAA→GAC) |
alsA ← |
D‑allose ABC transporter ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,310,468 | 0 | T | G | 41.1%
| 88.2
/ 197.6
| 160 | E171D (GAA→GAC) | alsA | D‑allose ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base T (55/39); new base G (38/28); total (93/67) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 164 total aligned reads displayed.
TTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGA > NC_000913/4310370‑4310567
|
ttATGCAAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGtt < 2:788020/100‑1 (MQ=255)
tGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCAt > 2:838415/1‑100 (MQ=255)
gCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATc > 2:684628/1‑100 (MQ=255)
cGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCTACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATcc > 2:3005401/1‑100 (MQ=255)
cGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATcc < 2:1595543/100‑1 (MQ=255)
cGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATcc > 2:3224022/1‑100 (MQ=255)
gagaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCa < 1:1816607/100‑1 (MQ=255)
agaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCat > 1:10360/1‑100 (MQ=255)
agaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCat < 2:3549199/100‑1 (MQ=255)
gaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatg < 1:613787/100‑1 (MQ=255)
atatAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatga < 2:3603819/100‑1 (MQ=255)
tctaGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGATACAGATAGTCCACCTCTTTATTGGTGAGTGAAGAGGTGGGGTCAGCCatga > 1:3721904/3‑99 (MQ=255)
tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgat > 2:2414804/1‑100 (MQ=255)
tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCatgat < 1:3902925/100‑1 (MQ=255)
ataGACGATGGCCGTACCCTCTTTACGCACCTGCTTCATGCTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGTAGGTGGGGTCATCCatgat > 1:3824943/1‑99 (MQ=255)
taGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatga > 1:4157506/1‑100 (MQ=255)
taGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCatgatg > 1:3256998/1‑99 (MQ=255)
aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat > 1:2386546/1‑100 (MQ=255)
aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat < 2:473353/100‑1 (MQ=255)
aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat > 2:1098366/1‑100 (MQ=255)
gACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGCGGTGGGTTCATCCatgatga > 1:3352096/1‑98 (MQ=255)
tGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt > 1:2292268/1‑100 (MQ=255)
gCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTgg < 1:720832/100‑1 (MQ=255)
gCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTgg < 1:3022896/100‑1 (MQ=255)
gCCGTACCCTCTTTACGCAACTAATTCATGATCAGAAACAGATAGTCCACCTCTTTATTTGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTgg > 1:309239/1‑100 (MQ=255)
ccGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGc > 2:3982853/1‑100 (MQ=255)
aCCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCGCCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCg < 1:2688130/100‑1 (MQ=255)
cccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGa > 2:3472981/1‑100 (MQ=255)
ccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAg < 1:1076007/100‑1 (MQ=255)
catctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAg < 1:2580687/98‑1 (MQ=255)
ctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGc < 2:497339/98‑1 (MQ=255)
ttACGCAACTGATTCATGATCAGAATCAGATAGTCCACCTCTTTATTGGTTAGTGTGTAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATc < 1:4258416/99‑1 (MQ=255)
ttACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCa > 1:1683114/1‑100 (MQ=255)
aCGCAACTGATTCATGTTCAGAAACAGATAGTGCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCTATGATGATGACTTTGGCATCGAGCATCAg < 1:272875/99‑1 (MQ=255)
cGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCg < 2:2493631/100‑1 (MQ=255)
cGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCg < 2:365181/100‑1 (MQ=255)
cGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCg < 2:2368672/100‑1 (MQ=255)
cAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGCTGACTTTGGCATCTAGCATCAGCGtt > 1:3972630/1‑100 (MQ=255)
cAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGAGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGtt > 1:1281254/1‑100 (MQ=255)
cTGATTCATGATCAGAAACAGATAGTCCACCTCGTTATTGGTGAGTGTGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGttt < 1:1912198/98‑1 (MQ=255)
tGATTCATGATCAGAAACAGATAGTCCTCCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTgg < 2:928206/100‑1 (MQ=255)
tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTgg < 2:2396210/100‑1 (MQ=255)
tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTgg < 2:1733205/100‑1 (MQ=255)
gATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGc > 2:4106461/1‑100 (MQ=255)
gATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGc > 2:362100/1‑100 (MQ=255)
gATTCATGATCAGAAACAGATAGTCCACCTCTTCATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTgg < 2:4183980/99‑1 (MQ=255)
aTTCATGAGCAGAAACAGATAGTCCACCTCTTTATTTGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCa < 1:2361778/100‑1 (MQ=255)
ttCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCaa > 2:2411455/1‑100 (MQ=255)
tCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAt > 1:2155801/1‑100 (MQ=255)
tCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAt > 1:957477/1‑100 (MQ=255)
cctGATCAGAAACGGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAtt > 2:2902580/3‑100 (MQ=255)
cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAtt < 2:2922404/100‑1 (MQ=255)
cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAtt > 2:3525332/1‑100 (MQ=255)
gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCt > 2:1168102/1‑100 (MQ=255)
gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCt > 2:4244064/1‑100 (MQ=255)
gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCt > 1:2609274/1‑100 (MQ=255)
aTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa > 1:3484418/1‑100 (MQ=255)
aTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATAGAGCATCAGCGTTTTGGCAATTTCTa > 1:2192845/1‑100 (MQ=255)
tCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg < 2:1432309/100‑1 (MQ=255)
aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGcn < 1:4243771/100‑2 (MQ=255)
aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCa > 1:2110095/1‑100 (MQ=255)
aaaCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATc < 1:4201464/100‑1 (MQ=255)
aCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTg > 1:3249049/1‑100 (MQ=255)
aTAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtg < 2:341254/100‑1 (MQ=255)
tAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtgt > 2:60567/1‑100 (MQ=255)
tAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtgt > 1:1307339/1‑100 (MQ=255)
gTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTgg > 2:14608/1‑100 (MQ=255)
tCCACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGc < 2:1977428/100‑1 (MQ=255)
ccACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt > 2:3294748/1‑100 (MQ=255)
ccACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt > 1:451350/1‑100 (MQ=255)
ccACCTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt > 2:1712002/1‑100 (MQ=255)
ccTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat > 1:600529/1‑100 (MQ=255)
ccTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat < 2:3534465/100‑1 (MQ=255)
ccTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat < 1:3803337/100‑1 (MQ=255)
ccTCTTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat > 2:1456528/1‑100 (MQ=255)
ctctTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgata < 1:1731935/100‑1 (MQ=255)
ctctTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgata < 2:3738012/100‑1 (MQ=255)
tctTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatag < 2:716215/100‑1 (MQ=255)
ctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatag < 2:1033288/99‑1 (MQ=255)
ctTTATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgataga > 1:2980728/1‑100 (MQ=255)
tttATTGGTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat < 2:3452962/100‑1 (MQ=255)
ttATTGGTGAGTGAGTAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagata < 2:4217868/100‑1 (MQ=255)
aTTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATaaa > 1:1376159/1‑100 (MQ=255)
ggTGAGTGAGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc > 2:4190170/1‑100 (MQ=255)
gtgagtgaGGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCg < 1:4043999/100‑1 (MQ=255)
tgagtgagGAGGTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGc > 1:2227154/1‑100 (MQ=255)
gtgagGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCAc > 1:2168690/1‑100 (MQ=255)
gtgagGAGGAGGGGTCATACATGATGATGACTTTGGCATCGAGAATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTAGCTAc > 1:483042/1‑100 (MQ=255)
atgagGAGCTGGCGTCATCTATGATGATGACATTGGAATCGAGCATTAGCGTTTTGGCAATTTCTAGCATCTTCTTGTTGCTGATAGATAAATTCGc > 1:787735/2‑97 (MQ=255)
gtggaggTGGGTTAATCCATGATGATGACTTGGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt > 2:2876321/3‑100 (MQ=255)
aggatgTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt < 1:912308/99‑1 (MQ=255)
ggaggTGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc > 2:435161/1‑100 (MQ=255)
aggTGGGTTTATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtctc < 1:1042894/100‑1 (MQ=255)
tGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc > 1:180345/1‑100 (MQ=255)
tGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc > 1:3394973/1‑100 (MQ=255)
tGGGGTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc > 1:3119505/1‑100 (MQ=255)
gggTTCATCCATGATGATGACTTTGGAATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCt > 2:2597164/1‑100 (MQ=255)
gTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAg > 2:3745297/1‑100 (MQ=255)
ttCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGa < 2:2561371/100‑1 (MQ=255)
ttCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGa > 1:814324/1‑100 (MQ=255)
|
TTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGA > NC_000913/4310370‑4310567
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
