Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,452,339 |
A→G |
24.0% |
intergenic (‑3/+17) |
yfcS ← / ← yfcU |
putative periplasmic pilin chaperone/pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,452,339 | 0 | A | G | 24.0%
| 220.4
/ 76.5
| 129 | intergenic (‑3/+17) | yfcS/yfcU | putative periplasmic pilin chaperone/pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (42/55); new base G (13/18); total (56/73) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 |
Only 100 of 130 total aligned reads displayed.
GTTACAGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGTCAT > NC_000913/2452245‑2452438
|
gTTACAGACGCCAGGGCAGACAAACGGGTAGCGCTAAGCAGTAACGCCCGCGTCATAGCCCCCAATTTGGCAGAGCAAAGTAAATCAGGCATGGCTCAtt > 2:3219708/1‑100 (MQ=255)
aCAGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCt < 2:1388874/100‑1 (MQ=255)
aCAGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCt < 2:3039483/100‑1 (MQ=255)
aCAGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCt > 1:426705/1‑100 (MQ=255)
aGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTa > 1:1905173/1‑100 (MQ=255)
gACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTaa > 1:254814/1‑100 (MQ=255)
gACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTaa > 2:3065063/1‑100 (MQ=255)
cGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATc > 1:1914142/1‑100 (MQ=255)
ggCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTa > 2:2550970/1‑100 (MQ=255)
gCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTAt > 1:366394/1‑100 (MQ=255)
cAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAAGTTGGCAGAGCAAAGGAAATCAGACATGGATCATTCCTTAATCACGTTAtt > 1:280883/1‑100 (MQ=255)
aGACAAACTGGTAGCGCTAAGCAGTAACGGCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAATTCAGACATGGATCATTCCTTAATCACGTTATTg < 1:2037437/100‑1 (MQ=255)
aGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTg < 1:2896429/100‑1 (MQ=255)
aGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTg > 2:1352641/1‑100 (MQ=255)
gACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTgg > 1:1970750/1‑100 (MQ=255)
aCAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGt < 2:202728/100‑1 (MQ=255)
cAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGtt < 2:669428/100‑1 (MQ=255)
aaaCTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTa < 2:1451926/100‑1 (MQ=255)
aaaCTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTa < 1:1148172/100‑1 (MQ=255)
aaCTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAg < 1:405474/100‑1 (MQ=255)
aCTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGc < 2:3119752/100‑1 (MQ=255)
aCTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGc < 2:1035196/100‑1 (MQ=255)
cTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTCGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCt < 2:1890798/100‑1 (MQ=255)
tGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTg > 1:2200029/1‑100 (MQ=255)
tGGGAGCGCTAAGCAGTAACGCCAGCGCCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTg < 1:270706/100‑1 (MQ=255)
ggTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTga > 2:1376038/1‑100 (MQ=255)
ggTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTga > 2:2327292/1‑100 (MQ=255)
ggTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTga > 1:602015/1‑100 (MQ=255)
ggTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTga < 2:2104621/100‑1 (MQ=255)
gTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTgaa > 2:2609620/1‑100 (MQ=255)
gTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaa < 2:280884/100‑1 (MQ=255)
tAGCGCTAAGCAGTAACGCCAACGTCATAGCACCCAATTTGGCAGACCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTgaaa < 1:104515/100‑1 (MQ=255)
gcgcTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaaaca > 1:2805428/1‑100 (MQ=255)
gcgcTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaaaca > 1:2022935/1‑100 (MQ=255)
cgcTAAGCAGTAACGCGAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCACTCCTTAATCACGTTATTGGTTAGc < 1:837516/92‑1 (MQ=255)
cgcTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaaacag < 2:2772484/100‑1 (MQ=255)
gcTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaaacaga > 1:2193382/1‑100 (MQ=255)
cTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTgaaacagaa > 1:2308539/1‑100 (MQ=255)
gCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGaaacagaaacag > 1:2596/1‑100 (MQ=255)
cAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAgg > 2:144856/1‑100 (MQ=255)
ccgatctccAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg < 2:200673/93‑1 (MQ=255)
aGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg < 2:1970763/100‑1 (MQ=255)
aGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg > 1:2952878/1‑100 (MQ=255)
aGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg > 1:2976430/1‑100 (MQ=255)
aGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg > 2:2838701/1‑100 (MQ=255)
aGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAggg < 2:2511212/100‑1 (MQ=255)
gTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAgggg < 2:3124999/100‑1 (MQ=255)
gTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAgggg < 2:3097814/100‑1 (MQ=255)
cGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATc > 2:2561845/1‑100 (MQ=255)
cAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAAGCAGACATGGGTCATTCCTTAATCACTTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggt < 1:1802564/100‑1 (MQ=255)
aGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtg < 1:790732/100‑1 (MQ=255)
cGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtggg < 2:602018/100‑1 (MQ=255)
cGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtggg < 1:1275275/100‑1 (MQ=255)
gTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtgggt > 1:1101323/1‑100 (MQ=255)
tCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtgggtg > 1:970073/1‑100 (MQ=255)
tCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtgggtg < 1:235211/100‑1 (MQ=255)
tCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCggtgggtg < 2:2401599/100‑1 (MQ=255)
aTAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTc < 2:2596/100‑1 (MQ=255)
aGCACCCAAGTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCCCGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCAc < 2:1945926/100‑1 (MQ=255)
gCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCAcc < 1:464286/100‑1 (MQ=255)
gCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCAcc > 2:1847346/1‑100 (MQ=255)
aCCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTg > 2:1010279/1‑100 (MQ=255)
cccAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGt > 2:383157/1‑100 (MQ=255)
cccAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGt < 2:1284997/100‑1 (MQ=255)
cAATTTGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTg < 1:1376032/100‑1 (MQ=255)
cAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTg < 1:864740/100‑1 (MQ=255)
cAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTg < 2:1357019/100‑1 (MQ=255)
tttGGCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGt < 1:1857173/100‑1 (MQ=255)
ttGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTc > 1:1653245/1‑100 (MQ=255)
ttGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTc < 2:1896540/100‑1 (MQ=255)
gCAGAGCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGGCTGc > 1:1431308/1‑100 (MQ=255)
gagCAAAGTAAATCAGACATGGATCATGCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTcc < 1:678272/100‑1 (MQ=255)
agCAAAGTAAATCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCt < 2:1151166/100‑1 (MQ=255)
gCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGATACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTg < 1:1847335/100‑1 (MQ=255)
gCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTg > 1:2045428/1‑100 (MQ=255)
aaaGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGaa > 1:2569016/1‑100 (MQ=255)
aGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATg < 1:91231/100‑1 (MQ=255)
aGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATg < 1:2561825/100‑1 (MQ=255)
aGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATg > 2:1614367/1‑100 (MQ=255)
aGTAAATCAGACATGGACCATTCCTTAATCACGTTATTTGTTAGCTGAAACAGAAACAGGGCGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATg < 1:1413948/100‑1 (MQ=255)
gTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGa > 1:2168710/1‑100 (MQ=255)
tAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGAc < 1:267453/100‑1 (MQ=255)
tAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGAc < 1:2630752/100‑1 (MQ=255)
tAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGAc < 1:213536/100‑1 (MQ=255)
aaaTCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACa < 1:2925862/100‑1 (MQ=255)
aaaTCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACa < 1:1709935/100‑1 (MQ=255)
aaTCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAg > 2:1841504/1‑100 (MQ=255)
aaTCAGACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAg < 2:592139/100‑1 (MQ=255)
aaTCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGGCAg < 2:366396/100‑1 (MQ=255)
aaTCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGCATCGGTGGGTGTCACAGGTTGCGTCTGCTCCTGAATGACAg > 2:2875611/1‑100 (MQ=255)
tCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGc > 1:3138123/1‑100 (MQ=255)
gACATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCttt < 2:1715311/100‑1 (MQ=255)
aCATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTa < 2:2901501/100‑1 (MQ=255)
cATGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTAt > 1:2534435/1‑100 (MQ=255)
tGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGt > 1:1510444/1‑100 (MQ=255)
tGGGTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGt < 1:998009/100‑1 (MQ=255)
tGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACCGGCTTTAtat > 2:142626/1‑98 (MQ=255)
tGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGt > 2:1564166/1‑100 (MQ=255)
gATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAAAAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGtca > 1:1851024/1‑100 (MQ=255)
aTCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGtcat < 2:1851036/100‑1 (MQ=255)
|
GTTACAGACGCCAGGGCAGACAAACTGGTAGCGCTAAGCAGTAACGCCAGCGTCATAGCACCCAATTTGGCAGAGCAAAGTAAATCAGACATGGATCATTCCTTAATCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAATGACAGGCTTTATGTCAT > NC_000913/2452245‑2452438
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
