Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I0 R1
|
328 |
102.7 |
5123138 |
93.4% |
4785010 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,966,414 |
T→G |
100% |
D674A (GAT→GCT) |
ptsP ← |
PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,966,414 | 0 | T | G | 97.2%
| 412.7
/ 0.8
| 122 | D674A (GAT→GCT) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base G (52/66); total (54/68) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 123 total aligned reads displayed.
ATGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAC > NC_000913/2966318‑2966510
|
aTGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAgcgc > 1:1239872/1‑100 (MQ=255)
cgccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcccg > 2:133452/1‑100 (MQ=255)
cgccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcccg < 2:2047902/100‑1 (MQ=255)
cgccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcccg > 1:500843/1‑100 (MQ=255)
ccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcccgcc < 1:1827007/100‑1 (MQ=255)
agcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCAttt < 1:2553733/100‑1 (MQ=255)
gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTc < 2:125576/100‑1 (MQ=255)
gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTc < 1:630798/100‑1 (MQ=255)
cagGTATTTTGCCCGCGCTACAGAACGCCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCCCACGGGAGcccccgcccctca > 2:2009261/1‑94 (MQ=255)
agGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAc < 1:1506009/100‑1 (MQ=255)
agGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAc > 2:2483440/1‑100 (MQ=255)
ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAcc < 1:2258408/100‑1 (MQ=255)
ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAcc < 1:1933493/100‑1 (MQ=255)
ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAcc < 1:2554327/100‑1 (MQ=255)
gTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGTGAGCGCCCGCCATTTCACCg < 2:1980603/100‑1 (MQ=255)
tATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGc < 1:2550254/100‑1 (MQ=255)
ttttGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGcac < 1:1351913/100‑1 (MQ=255)
ttttGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGcac < 1:1613233/100‑1 (MQ=255)
gCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAAc > 1:67331/1‑100 (MQ=255)
gCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAAc > 1:1329382/1‑100 (MQ=255)
cccGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCACTGAGGATTGCCACGCACATAGGAGCGCCCGCCATATCACCGCACAAAc > 2:245492/1‑99 (MQ=255)
cccGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACg > 1:1277597/1‑100 (MQ=255)
cgcgCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGga < 1:870851/100‑1 (MQ=255)
gcgcTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGgag > 1:2065793/1‑100 (MQ=255)
cTACAGAGCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATc < 1:133454/100‑1 (MQ=255)
cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATc < 1:113220/100‑1 (MQ=255)
cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATc < 2:838101/100‑1 (MQ=255)
cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATc < 1:2249281/100‑1 (MQ=255)
aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCACCCGCCATTTCACCGCACAAACGGAGATCGa > 2:2361015/1‑100 (MQ=255)
gAACGTCCGTTCATAGACAGATGGCGTTACCCAAGCCCAATGGGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGTTCgct > 2:73093/1‑96 (MQ=255)
aaCGTACGTTCATAGACAGATGGCGACACCCAAGCCCAATGAGGATTGCCCCGCACATGGAAGCGCCCGCCATTTCACCGCACAAACGGAGATCGAtt < 2:2043502/98‑1 (MQ=255)
aCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCa < 2:480746/100‑1 (MQ=255)
cGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCa < 2:1858137/99‑1 (MQ=255)
cGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCAt < 2:2150339/100‑1 (MQ=255)
cGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCAt < 2:1928389/100‑1 (MQ=255)
gTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATg < 2:2047689/100‑1 (MQ=255)
gTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATg < 2:1204774/100‑1 (MQ=255)
cGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTAt > 1:1857499/1‑100 (MQ=255)
gctCATAGACAGAGGGCGATACCCAACCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTa < 2:2298833/96‑1 (MQ=255)
ttCATAGACAGATGGCGATACCCAAGCGCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTAttt > 2:556407/1‑100 (MQ=255)
cATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTcc > 2:1886080/1‑100 (MQ=255)
cATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTcc < 1:1980389/100‑1 (MQ=255)
tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc > 1:1064043/1‑100 (MQ=255)
gACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCtt < 2:1098814/100‑1 (MQ=255)
cAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTcc > 1:1392923/1‑100 (MQ=255)
aGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTccc < 1:991369/100‑1 (MQ=255)
tGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCggg < 1:2345643/100‑1 (MQ=255)
tGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCggg > 2:1172556/1‑100 (MQ=255)
tGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCggg < 2:1979920/100‑1 (MQ=255)
cGATACCCAAGCCCAATGAGGATTGCCACGCACATTGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGa < 1:2491995/100‑1 (MQ=255)
gATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGat > 2:1054556/1‑100 (MQ=255)
tACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCGCAAACGGAGGTCGATACCCGGTATTTCCGCTTCCCGGGCg > 2:1685684/1‑96 (MQ=255)
tACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatca < 1:1300310/100‑1 (MQ=255)
tACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatc < 1:185646/99‑1 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTCCCCGGGCGatcatc > 2:1648640/1‑100 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 2:1594617/1‑100 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 2:1094761/1‑100 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGAGCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 2:1089218/1‑100 (MQ=255)
ccAAGCCGATTGACGGTTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCCCATACGGAGATCGATTCCATTTATTTCCGCTGCCCGGGCGATCATCg < 2:916685/100‑1 (MQ=255)
cAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGc > 2:2506068/1‑100 (MQ=255)
aaGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGcc < 1:732731/100‑1 (MQ=255)
aGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCa < 1:1830571/100‑1 (MQ=255)
gCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag < 1:939154/100‑1 (MQ=255)
gCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag < 1:1315857/100‑1 (MQ=255)
gCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag < 2:526063/100‑1 (MQ=255)
cccAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCaga > 2:156823/1‑100 (MQ=255)
cccAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCaga < 2:870538/100‑1 (MQ=255)
ccAATGAGGATTGCCACGCACATGGGAGCGCCGGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCagag < 2:28476/100‑1 (MQ=255)
cAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGc < 1:2097237/100‑1 (MQ=255)
aaTGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCt > 1:1137116/1‑100 (MQ=255)
aTGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACCAACGGAGATCGATTCCATGTATTTCCGCTGCCCGGGCGATGATCGcccgggaag < 2:1664556/100‑8 (MQ=255)
gAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGt > 1:1191642/1‑100 (MQ=255)
gAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGt < 1:2344518/100‑1 (MQ=255)
aGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAATCGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTa < 1:2175972/100‑1 (MQ=255)
ggATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaa > 1:441362/1‑100 (MQ=255)
ggATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaa < 2:678374/100‑1 (MQ=255)
aTTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACa > 1:1490403/1‑100 (MQ=255)
aTTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACCGAGATCGATTCCATGTATTTCCGCTTCCCGCGCGATCATCGCCAGAGCTCg > 2:2253331/1‑95 (MQ=255)
gCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg > 2:568916/1‑100 (MQ=255)
gCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg > 1:1023892/1‑100 (MQ=255)
ccACGCACATGGGAGCTCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGc < 2:191885/100‑1 (MQ=255)
ccACGCACATGGGAGCACCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg > 1:220377/1‑99 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa < 1:2483454/100‑1 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa > 1:399219/1‑100 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTCCa > 2:746741/1‑100 (MQ=255)
aCGCACATGGGAGCGCCCGCCATTTCACCGCACACACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGc < 2:851511/98‑1 (MQ=255)
aCGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa < 2:2265333/99‑1 (MQ=255)
aCGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg > 1:1753123/1‑100 (MQ=255)
aCGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg < 1:2281119/100‑1 (MQ=255)
gCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGa < 1:2521965/100‑1 (MQ=255)
gCACATGGGAGCACCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGa < 1:2361030/100‑1 (MQ=255)
cacaTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGAt < 2:2008403/100‑1 (MQ=255)
acaTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCTATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATg < 1:959103/100‑1 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTCACATTGCAGGATg > 1:940652/1‑99 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATg > 2:2186187/1‑99 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGa > 2:2032443/1‑100 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGa < 1:529517/100‑1 (MQ=255)
tGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAg > 2:801814/1‑100 (MQ=255)
tGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAg > 1:767150/1‑100 (MQ=255)
ggAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAc > 1:1053813/1‑100 (MQ=255)
|
ATGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAC > NC_000913/2966318‑2966510
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
