Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I1 R1
|
186 |
136.5 |
6958264 |
92.1% |
6408561 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,966,414 |
T→G |
D674A (GAT→GCT) |
ptsP ← |
PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,966,414 | 0 | T | G | 97.7%
| 429.2
/ 0.0
| 131 | D674A (GAT→GCT) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base G (48/78); total (50/81) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.79e-01 |
Only 100 of 131 total aligned reads displayed.
TGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAC > NC_000913/2966319‑2966510
|
tGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcc < 1:690880/100‑1 (MQ=255)
tGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcc > 2:2473941/1‑100 (MQ=255)
gcgcCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgccc < 2:2380435/100‑1 (MQ=255)
gccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGCTTGCCACGCACATGGGAGcgcccgc > 1:2049792/1‑100 (MQ=255)
gccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGcgcccgc < 2:303885/100‑1 (MQ=255)
gcagcaGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCAt > 1:124265/1‑100 (MQ=255)
gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTc < 2:2714520/100‑1 (MQ=255)
ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAcc < 2:2095681/100‑1 (MQ=255)
ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCAcc < 1:3339056/100‑1 (MQ=255)
gTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCg < 1:3090091/100‑1 (MQ=255)
gTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCg > 2:2498127/1‑100 (MQ=255)
tATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGc < 2:255877/100‑1 (MQ=255)
tATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGc < 2:619819/100‑1 (MQ=255)
aTTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGca > 2:3074342/1‑100 (MQ=255)
ttGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACaa > 1:1885547/1‑100 (MQ=255)
gCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAAc < 2:1009246/100‑1 (MQ=255)
ccGCGCTACAGAACGTCCGTTCATAGACATATGGCGATACCCAAGCCCAAAGAGGATTGCCACGCACATGCGAGCGCCCGCCATTTCACCGCACAAACg > 1:100899/1‑99 (MQ=255)
ccGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACgg > 2:3204682/1‑100 (MQ=255)
ccGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACg < 1:439518/99‑1 (MQ=255)
cgcgCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGga < 1:1834220/100‑1 (MQ=255)
gcTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGAt < 2:816334/100‑1 (MQ=255)
tACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCg < 1:756159/100‑1 (MQ=255)
aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCg > 1:2566710/1‑99 (MQ=255)
aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGa > 2:1950708/1‑100 (MQ=255)
cAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGAt < 1:2733341/100‑1 (MQ=255)
cAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGAt < 1:2912465/100‑1 (MQ=255)
gAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTc > 2:974339/1‑100 (MQ=255)
gAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTc < 1:229/100‑1 (MQ=255)
aaCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTcc < 2:591621/100‑1 (MQ=255)
aCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCa > 2:2416094/1‑100 (MQ=255)
aCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCa > 1:1867391/1‑100 (MQ=255)
cGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCAt > 1:2042086/1‑100 (MQ=255)
tCCGTTCATAGACAGCTGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGt < 2:3430781/100‑1 (MQ=255)
tCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGt < 1:3255046/100‑1 (MQ=255)
tCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGt > 1:1413588/1‑100 (MQ=255)
tCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGt > 1:573424/1‑100 (MQ=255)
ccGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTa < 2:678045/100‑1 (MQ=255)
ccGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTa < 2:1893966/100‑1 (MQ=255)
gTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTAtt < 2:551758/100‑1 (MQ=255)
cATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTcc < 2:2794321/100‑1 (MQ=255)
cATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTcc < 2:1581120/100‑1 (MQ=255)
tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc < 1:2010241/100‑1 (MQ=255)
tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc < 1:1037068/100‑1 (MQ=255)
aCAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTc < 2:293465/100‑1 (MQ=255)
cAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTcc > 2:915886/1‑100 (MQ=255)
cAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTc > 1:2114367/1‑99 (MQ=255)
cAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTc > 1:2893215/1‑99 (MQ=255)
gATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCg > 2:1957711/1‑100 (MQ=255)
gATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCg > 2:2621076/1‑100 (MQ=255)
aTGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCgg < 2:124267/100‑1 (MQ=255)
ggCGTTACCCAAGCCCAATGTGGATTGCCACGCTCGTGGGAGGGCCCTGCATTTCACCGCGCAAGCGGAGATCGATTCCATGTATTTCCGCTTCCCGGGc < 1:687699/100‑1 (MQ=255)
ggCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGc < 1:2954964/100‑1 (MQ=255)
ggCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGc > 2:400250/1‑100 (MQ=255)
gCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCg < 1:2310030/100‑1 (MQ=255)
gCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCg < 2:1055817/100‑1 (MQ=255)
gCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCg > 2:1189567/1‑100 (MQ=255)
cGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGa > 2:2292200/1‑100 (MQ=255)
gATACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGat > 1:934342/1‑100 (MQ=255)
tACCCAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatca < 2:682852/100‑1 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 1:3129320/1‑100 (MQ=255)
cccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 1:1289903/1‑100 (MQ=255)
ccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACTGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCg < 1:1904031/100‑1 (MQ=255)
ccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCg < 2:790152/100‑1 (MQ=255)
ccAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCg < 1:932959/100‑1 (MQ=255)
cAAGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGc < 1:482818/100‑1 (MQ=255)
aaGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGcc < 1:1058816/100‑1 (MQ=255)
aaGCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGcc < 2:1011048/100‑1 (MQ=255)
gCCCAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag < 2:859514/100‑1 (MQ=255)
cccAACGAGGATTGCCACGCACACGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag < 2:1564600/99‑1 (MQ=255)
ccAATGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCagag < 1:2191518/100‑1 (MQ=255)
aaTGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCt < 1:1759641/100‑1 (MQ=255)
aaTGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCt > 2:1523085/1‑100 (MQ=255)
aaTGAGGATTGCCACGCACATGGGAGCACCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGc > 2:1191353/1‑99 (MQ=255)
aTGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTc < 2:403952/100‑1 (MQ=255)
tGAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCg > 1:3244189/1‑100 (MQ=255)
gAGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGt < 1:3264883/100‑1 (MQ=255)
aGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTa < 2:934354/100‑1 (MQ=255)
aGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTa > 1:962532/1‑100 (MQ=255)
aGGATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTa < 1:3004505/100‑1 (MQ=255)
aGGATTGCCACACACATGGAAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCAATGTATTTCCGCTTCCCGGGCGACCATCGCCAGAGCTCGTa > 1:1337026/1‑100 (MQ=255)
ggATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaa < 2:821458/100‑1 (MQ=255)
gATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAAc < 2:2410327/100‑1 (MQ=255)
gATTGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAAc < 1:974327/100‑1 (MQ=255)
ttcccACTCACATGGGACCTCCCGCCATTTCACCGCACAAACTGAGATCAATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaa < 1:1589024/94‑1 (MQ=255)
ttGCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACAt < 1:681139/100‑1 (MQ=255)
gCCACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg < 2:1282054/100‑1 (MQ=255)
ccACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCGGGGCGATCATCGCCAGAGCTCGTAACATTGc < 1:1184945/100‑1 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa < 2:1316732/100‑1 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa < 1:3357911/100‑1 (MQ=255)
cACGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa > 2:1296408/1‑100 (MQ=255)
cACGCACATGGGAGCGCCCGCAATTTCACCGCAAAAACGGAGATCGATTCGATGTATTTCAGCTTCCCGGGCGATCATAGCAACAGCTCGTAACATTGc > 1:330350/1‑99 (MQ=255)
cACGCACATGGGAACGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa > 1:266711/1‑100 (MQ=255)
gatctcaTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg < 2:2871520/95‑1 (MQ=255)
cGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATGATCGCCAGAGCTCGTAACATTGCAgg > 1:1245222/1‑100 (MQ=255)
cGCACATGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAgg < 2:2219559/100‑1 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAgagatc > 1:2871474/1‑95 (MQ=255)
caTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGa > 2:2520685/1‑100 (MQ=255)
aTGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGaa < 2:3351284/100‑1 (MQ=255)
tGGGAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAg > 2:2736669/1‑100 (MQ=255)
ggAGCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAc < 1:1058594/100‑1 (MQ=255)
|
TGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGAC > NC_000913/2966319‑2966510
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
