Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F256 I0 R1 328 102.7 5123138 93.4% 4785010 99.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,238,726 A→G 100% I365V (ATT→GTT)  yjbH → DUF940 family extracellular polysaccharide protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,238,7260AG97.7% 282.3 / ‑3.5 83I365V (ATT→GTT) yjbHDUF940 family extracellular polysaccharide protein
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (42/39);  total (42/41)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

GCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAA  >  NC_000913/4238631‑4238822
                                                                                               |                                                                                                
gCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCTTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTAc                                                                                              <  2:2310399/100‑1 (MQ=255)
 cGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACg                                                                                             <  1:20567/100‑1 (MQ=255)
  gAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACgg                                                                                            <  1:2301942/100‑1 (MQ=255)
  gAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACgg                                                                                            <  2:1776663/100‑1 (MQ=255)
    gCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGaa                                                                                          >  1:595931/1‑100 (MQ=255)
       ggTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAAt                                                                                       >  1:1594831/1‑100 (MQ=255)
        gTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATc                                                                                      <  1:405735/100‑1 (MQ=255)
        gTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATc                                                                                      >  1:348849/1‑100 (MQ=255)
         tGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCg                                                                                     >  1:1231191/1‑100 (MQ=255)
          gAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGc                                                                                    >  1:934446/1‑100 (MQ=255)
           aaaTATCGTGATTCGCTCGAATGGATCATCCGTGCGAATCTGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCg                                                                                     <  2:632159/98‑1 (MQ=255)
           aaaTATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGcc                                                                                   <  1:2361016/100‑1 (MQ=255)
           aaaGATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGcc                                                                                   <  2:585791/100‑1 (MQ=255)
            aaTATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCt                                                                                  <  1:1181421/100‑1 (MQ=255)
             atatCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCtt                                                                                 <  2:597843/100‑1 (MQ=255)
              tatCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTa                                                                                >  2:1165505/1‑100 (MQ=255)
              tatCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTa                                                                                >  2:798372/1‑100 (MQ=255)
               atCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGCGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTaa                                                                               <  2:1794886/100‑1 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCATAACGATCCGCGTTACGGAAAATCGCCTTAACAt                                                                            >  2:1027874/1‑100 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACa                                                                             >  2:1023716/1‑99 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACAt                                                                            >  2:2037709/1‑100 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACAt                                                                            >  2:1370305/1‑100 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACAt                                                                            >  2:719653/1‑100 (MQ=255)
                  gTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAAc                                                                              <  2:2198956/98‑1 (MQ=255)
                      ttCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCg                                                                        >  1:2250608/1‑100 (MQ=255)
                       tCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGc                                                                       <  2:340843/100‑1 (MQ=255)
                         gcgcgAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAg                                                                     >  1:1425018/1‑100 (MQ=255)
                          cgcgAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAgg                                                                    >  1:486589/1‑100 (MQ=255)
                          cgcgAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAgg                                                                    <  1:931078/100‑1 (MQ=255)
                             gAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCCAAACGATCCGCGTTACTGAAAATCGCCTTAACATGCCGCAGGTga                                                                 >  2:2293488/1‑100 (MQ=255)
                             gAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTga                                                                 >  2:1956536/1‑100 (MQ=255)
                              aaGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCCCAGGTg                                                                  >  2:2172469/1‑98 (MQ=255)
                              aaGGGATCATCCGTGCGAATCGGATCGTGAAGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTgac                                                                <  2:543915/100‑1 (MQ=255)
                                gagATCATCCGTGAGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTgacga                                                              >  1:1727960/3‑100 (MQ=255)
                                 ggAACATCCGTGCGAATCGGCTCGTGATGACCGACCTGCCGGATGGGATCGAGGCGATCCGTGTTACGGGAAATCGCCTTAACATGCCGCAGGTcacgac                                                             <  2:1461153/100‑1 (MQ=255)
                                  gATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGacgacg                                                            >  1:1729235/1‑100 (MQ=255)
                                   atcatcCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACgg                                                           <  1:2265246/100‑1 (MQ=255)
                                    tcatcCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCATAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGa                                                          <  1:1027882/100‑1 (MQ=255)
                                    tcatcCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGa                                                          <  2:809279/100‑1 (MQ=255)
                                    tcatcCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGa                                                          <  1:1023724/100‑1 (MQ=255)
                                        ccGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAAcc                                                      <  1:1470998/100‑1 (MQ=255)
                                        ccGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAAcc                                                      <  1:275079/100‑1 (MQ=255)
                                        ccGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAAcc                                                      <  1:832130/100‑1 (MQ=255)
                                         cGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCAGCAGGTGACGACGGAAAcc                                                      <  2:1013937/99‑1 (MQ=255)
                                          gTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGa                                                    <  2:2098939/100‑1 (MQ=255)
                                          gTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGa                                                    <  2:540787/100‑1 (MQ=255)
                                          gTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGa                                                    >  2:1200350/1‑100 (MQ=255)
                                           tGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGAt                                                   >  2:201368/1‑100 (MQ=255)
                                           tGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGAt                                                   <  1:1509648/100‑1 (MQ=255)
                                              gAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTc                                                >  1:364348/1‑100 (MQ=255)
                                               aaTCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCg                                               >  1:156480/1‑100 (MQ=255)
                                               aaTCGGATCGTGATGAACGATCTCCCGGATGGGATCAAAACGAGCCGCGTTACGGAAACTCGCCTTAACAGGCCGCAGGTGACGGGGGAAACCGGTg                                                  >  2:2365601/1‑97 (MQ=255)
                                                    gATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGc                                          >  2:1216147/1‑100 (MQ=255)
                                                     aTCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGcc                                         >  1:668309/1‑100 (MQ=255)
                                                     aTCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGcc                                         <  2:2250594/100‑1 (MQ=255)
                                                     aTCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGcc                                         <  2:1738015/100‑1 (MQ=255)
                                                     aTCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGc                                          >  2:753665/1‑99 (MQ=255)
                                                         tgatgaACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGaa                                     >  1:1936586/1‑100 (MQ=255)
                                                            tgaACGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGaaaaa                                  <  1:2203881/100‑1 (MQ=255)
                                                               aCGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAatca                               >  1:1553375/1‑100 (MQ=255)
                                                               aCGATCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAatca                               <  1:1216155/100‑1 (MQ=255)
                                                                  aTCTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCAtct                            >  1:891989/1‑100 (MQ=255)
                                                                    cTGCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCg                          >  2:1511267/1‑100 (MQ=255)
                                                                    cTGCCGGACGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCg                          >  2:1028792/1‑100 (MQ=255)
                                                                      gCCGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGcc                        >  1:2481645/1‑100 (MQ=255)
                                                                       ccGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACTGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCg                       <  2:1369782/100‑1 (MQ=255)
                                                                       ccGGATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCg                       <  1:1751168/100‑1 (MQ=255)
                                                                         ggATGGGATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGga                     >  2:1709584/1‑100 (MQ=255)
                                                                             gggATCAAAACGATCCGCGTTACGGAAAAGCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGc                 <  2:2375300/100‑1 (MQ=255)
                                                                              ggATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGcc                >  2:1063133/1‑100 (MQ=255)
                                                                               gATCAAAACGCTCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCg               <  2:1684662/100‑1 (MQ=255)
                                                                               gATCAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGCGAGCCg               >  2:639655/1‑100 (MQ=255)
                                                                                  cAAAACGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTg            >  2:2411129/1‑100 (MQ=255)
                                                                                   aaaaCGATCCGCGTTACAGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTgg           <  1:2471507/100‑1 (MQ=255)
                                                                                    aaaCGGTCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTggg          <  2:141039/100‑1 (MQ=255)
                                                                                    aaaCGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTggg          >  2:2471617/1‑100 (MQ=255)
                                                                                    aaaCGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTggg          <  1:1851323/100‑1 (MQ=255)
                                                                                    aaaCGATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTggg          <  1:415413/100‑1 (MQ=255)
                                                                                        gATCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCCGCCTGAAAAATCATCTCGCCGGCGAGCCGTTGGGCCa       >  1:22444/1‑99 (MQ=255)
                                                                                         aTCCGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACg     >  1:687543/1‑100 (MQ=255)
                                                                                           ccGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGaa   >  1:650002/1‑100 (MQ=255)
                                                                                           ccGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGaa   <  1:1199172/100‑1 (MQ=255)
                                                                                           ccGCGTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGaa   <  1:2493137/100‑1 (MQ=255)
                                                                                            cgcgTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGaaa  >  2:1199122/1‑100 (MQ=255)
                                                                                            cgcgTTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGaaa  >  2:2484374/1‑100 (MQ=255)
                                                                                               |                                                                                                
GCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAA  >  NC_000913/4238631‑4238822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A