Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I1 R1
|
174 |
80.0 |
3892211 |
96.7% |
3763768 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,564,525 |
G→A |
M1M (ATG→ATA) † |
yffS → |
CPZ‑55 prophage; uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,564,525 | 0 | G | A | 88.9%
| 252.4
/ 16.4
| 91 | M1M (ATG→ATA) † | yffS | CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (6/4); new base A (47/33); total (54/37) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGCA > NC_000913/2564428‑2564621
|
gtgATCTGCGTCAATATTCCCTCCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGTAGATAAAAATCATGAg < 2:455214/100‑1 (MQ=255)
gATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGtt > 2:1395894/1‑100 (MQ=255)
gATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGtt > 2:1102017/1‑100 (MQ=255)
gATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGtt > 1:566660/1‑100 (MQ=255)
tCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑Ac < 1:853223/100‑1 (MQ=255)
tGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGa > 2:547680/1‑100 (MQ=255)
gCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGaa < 1:1118174/100‑1 (MQ=255)
cGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGaaa > 2:1893266/1‑100 (MQ=255)
cGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCAGGAGATGGGAGATAAAAATCATAAGTT‑ACGaaa > 1:1618686/1‑100 (MQ=255)
tatTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCaaaa < 2:37443/100‑1 (MQ=255)
tatTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCaaaa > 1:50769/1‑100 (MQ=255)
atTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAAt > 2:12860/1‑100 (MQ=255)
ttCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAAtt > 1:1272431/1‑100 (MQ=255)
ttCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAAtt < 1:161808/100‑1 (MQ=255)
ttCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCAT‑AGTTGACGAAATCAAAAt > 1:159087/1‑99 (MQ=255)
cccTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTg > 1:1935901/1‑100 (MQ=255)
cccTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTg > 1:928686/1‑100 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGGAATCAAAATTTGCg > 1:1322688/1‑100 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCg < 2:1887521/100‑1 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCg > 1:1229707/1‑100 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCg < 1:1102016/100‑1 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCg < 2:1153686/100‑1 (MQ=255)
ttCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGa < 1:1012669/100‑1 (MQ=255)
ccGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACa < 2:1673920/100‑1 (MQ=255)
gTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATc > 1:336652/1‑100 (MQ=255)
tACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCt < 2:706360/100‑1 (MQ=255)
cGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCa < 1:903109/100‑1 (MQ=255)
cTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCaaa > 1:1147042/1‑100 (MQ=255)
tACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGAAGGGAGATAAAAATCATAAGTT‑CCGAAATCAAAATTTGCGACATCATCAAAg > 1:873479/1‑99 (MQ=255)
cccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcg > 2:371599/1‑100 (MQ=255)
cccTCCACCAATACGCGTGTTAACCTACCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcg > 2:1183355/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 1:817284/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 1:659909/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 2:1142124/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGgcgc < 1:765580/100‑1 (MQ=255)
tCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTg < 2:50769/100‑1 (MQ=255)
tCCACCAATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTg > 2:1793078/1‑100 (MQ=255)
ccaccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGc > 1:775817/1‑100 (MQ=255)
ccaccaATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGc > 2:1273239/1‑100 (MQ=255)
ccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAt > 2:1934099/1‑100 (MQ=255)
caATACGCGTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATg > 1:650028/1‑100 (MQ=255)
cgcgTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAgg > 2:1837354/1‑100 (MQ=255)
cgcgTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAg < 1:179626/99‑1 (MQ=255)
cgcgTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAgg > 1:73731/1‑100 (MQ=255)
cgTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGAc < 1:979119/100‑1 (MQ=255)
cgTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGAc < 2:1641434/100‑1 (MQ=255)
cgTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGAc > 1:1149763/1‑100 (MQ=255)
gtgtTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACa > 2:627628/1‑100 (MQ=255)
gtgtTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACa < 1:346862/100‑1 (MQ=255)
tAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGAGATGGAAGGACAatat > 1:1901371/1‑100 (MQ=255)
aaCCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAAtata > 1:529475/1‑100 (MQ=255)
tCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAggg < 2:1748969/100‑1 (MQ=255)
tCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAggg < 1:1395886/100‑1 (MQ=255)
cccAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATGTAAGGgc > 1:753623/1‑100 (MQ=255)
ccAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcg > 1:1173339/1‑100 (MQ=255)
ccAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcg > 2:1279320/1‑100 (MQ=255)
cAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcgc < 2:1238591/100‑1 (MQ=255)
aaTGGATTCTATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCt < 2:1057826/100‑1 (MQ=255)
aaTGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCt > 2:1610756/1‑100 (MQ=255)
aaTGGATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCt > 2:659447/1‑100 (MQ=255)
ggATTCCATGAGATGGGAGATAAAAATCATAAGTG‑ACGAAATCAAAATTTGCGCAAACCTCAAAGGCACTGCGATGGAAGGAGAATATAAGGgcgaaca > 1:1925103/1‑95 (MQ=255)
gATTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAAc < 2:936532/100‑1 (MQ=255)
aTTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACg < 2:1229711/100‑1 (MQ=255)
aTTCCATGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACg > 1:410806/1‑100 (MQ=255)
ccaTGAGATGGGTGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTgg > 1:1519214/3‑100 (MQ=255)
ccaTGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTgg > 2:430098/3‑100 (MQ=255)
aTGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTgggg > 1:1210066/1‑100 (MQ=255)
tGAGATGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGc < 2:327030/100‑1 (MQ=255)
agaTGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa < 1:1070033/100‑1 (MQ=255)
gaTGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaa > 2:798148/1‑100 (MQ=255)
aTGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaaa < 1:340311/100‑1 (MQ=255)
aTGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaaa > 2:1030580/1‑100 (MQ=255)
aTGGGAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaa > 1:108147/1‑99 (MQ=255)
gggAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATg > 2:1124095/1‑100 (MQ=255)
gggAGATAAAAAGCATAAGTG‑ACGAAATCAAAAGTGGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATg < 2:601842/100‑1 (MQ=255)
ggAGATATAAATGACAAGTT‑ACGAATTCAAAATCTGCTACATCCTCAAAGGCGCTGCAATAGAAGTATAATATAAGGACTAAAAACTTGGAGCCAAAtac > 1:1337318/1‑98 (MQ=255)
ggAGATAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGc < 1:311009/100‑1 (MQ=255)
gagaTAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCg > 2:132480/1‑100 (MQ=255)
gaTAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag > 1:1567397/1‑100 (MQ=255)
gaTAAAAAGCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag < 1:298360/100‑1 (MQ=255)
aTAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagg < 2:928687/100‑1 (MQ=255)
tAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagga > 1:1651994/1‑100 (MQ=255)
tAAAAATCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagga > 1:1100790/1‑100 (MQ=255)
aaaaaTCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgaggag < 1:712537/100‑1 (MQ=255)
aaaaaTCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagaag > 1:663701/1‑100 (MQ=255)
aaaTCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGAt < 2:601377/100‑1 (MQ=255)
aaTCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATc < 2:649642/100‑1 (MQ=255)
aTCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCg < 1:1595710/100‑1 (MQ=255)
tCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGc < 1:1684874/100‑1 (MQ=255)
tCATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGc < 2:142040/100‑1 (MQ=255)
cATAAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGCa > 2:1684884/1‑100 (MQ=255)
|
GTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTT‑ACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGCA > NC_000913/2564428‑2564621
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
