Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,564,525 |
G→A |
100% |
M1M (ATG→ATA) † |
yffS → |
CPZ‑55 prophage; uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,564,525 | 0 | G | A | 97.3%
| 479.1
/ 1.7
| 147 | M1M (ATG→ATA) † | yffS | CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base A (80/63); total (81/66) |
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 |
Only 100 of 147 total aligned reads displayed.
GTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGC > NC_000913/2564428‑2564620
|
gtgATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAg < 2:4032588/100‑1 (MQ=255)
gATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAAGCATAAGtt > 2:2221145/1‑100 (MQ=255)
aTCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTa > 2:2727785/1‑100 (MQ=255)
tCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTAc > 1:511233/1‑100 (MQ=255)
tCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTAc < 1:1461411/100‑1 (MQ=255)
cTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACg < 2:1328139/100‑1 (MQ=255)
tGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGa < 1:3550751/100‑1 (MQ=255)
tGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGa < 1:1730426/100‑1 (MQ=255)
ncGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATGCTATGAGATGGGAGATAAAAATCATAAGTTACGaa > 1:2054661/2‑100 (MQ=255)
gCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGaa < 1:3532440/100‑1 (MQ=255)
gCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGaa > 1:200945/1‑100 (MQ=255)
gCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGaa > 2:2695464/1‑100 (MQ=255)
cGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGaaa > 1:448995/1‑100 (MQ=255)
tCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAAt < 1:3018699/99‑1 (MQ=255)
atatTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCaaa > 1:1496401/1‑100 (MQ=255)
atatTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCaaa > 1:941763/1‑100 (MQ=255)
atTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCaaaa < 2:658607/99‑1 (MQ=255)
cgcaaccGTTACGCTTACCCTCCAACAAAACGGGTGTTAACCTCCCAATGTATTCTATGAAAAAAAAAAAAAAAATCATAAGTTACGAAATCAAAATTTg < 2:2967576/95‑1 (MQ=255)
ccTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATTGGAGATAAAAACCATAAGTTACGAAATCAAAATTTGc > 2:60476/1‑100 (MQ=255)
ccTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGTAGATAAAAATCATAAGTTACGAAATCAAAATTTGc > 1:1570050/1‑100 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCg < 1:2181292/100‑1 (MQ=255)
cTTCCGTTACGCTTACCCTCCACCAATACGCGCGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCg > 2:1897129/1‑100 (MQ=255)
tCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGAc < 1:4065453/100‑1 (MQ=255)
ccGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCg < 2:3824630/97‑1 (MQ=255)
aCGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTc < 1:2126028/100‑1 (MQ=255)
aCGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTc < 2:1123962/100‑1 (MQ=255)
aCGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTc < 2:794985/100‑1 (MQ=255)
cGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCa < 2:3650778/100‑1 (MQ=255)
cTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGTGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCaaa > 1:897429/1‑100 (MQ=255)
tACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAgg > 1:110708/1‑100 (MQ=255)
cccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcg > 1:3139343/1‑100 (MQ=255)
cccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcg > 1:3234511/1‑100 (MQ=255)
cccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcg > 2:299581/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 2:1034313/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 1:2461909/1‑100 (MQ=255)
ccTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcgc > 2:2124357/1‑100 (MQ=255)
cTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCt > 1:3907311/1‑100 (MQ=255)
tCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcgc < 2:3865469/98‑1 (MQ=255)
caccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCg < 2:3707243/100‑1 (MQ=255)
caccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCg < 2:4078644/100‑1 (MQ=255)
caccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCg > 1:1135046/1‑100 (MQ=255)
accaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGa > 1:2194679/1‑100 (MQ=255)
ccaATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAt > 1:1873777/1‑100 (MQ=255)
caATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑g < 1:3026132/100‑1 (MQ=255)
caATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑g < 2:2220397/100‑1 (MQ=255)
aaTACGCGTGTTAACCTCCCAATAGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑gg < 1:4031189/100‑1 (MQ=255)
aCGCGTGTTAACCTCCCAATGGATTCTATTAGATGGTAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAg < 1:478647/100‑1 (MQ=255)
aCGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCGAAGGCGCTGCGAT‑GGAAg < 2:2809791/100‑1 (MQ=255)
aCGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGaa < 2:3051011/99‑1 (MQ=255)
aCGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAg < 1:2124370/100‑1 (MQ=255)
aCGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAg < 2:1771295/100‑1 (MQ=255)
cgcgTGTTAACCTCCCAATGGATTCCATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGaa > 2:2011433/1‑98 (MQ=255)
cgTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTAAAAGGCGCTGCGAT‑GGAAGGAc > 2:1951834/1‑100 (MQ=255)
gtgtTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACa < 2:2760023/100‑1 (MQ=255)
tgtTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACaa > 2:470028/1‑100 (MQ=255)
gtTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCGAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAat < 1:2797839/100‑1 (MQ=255)
gtTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAat < 1:1113275/100‑1 (MQ=255)
aaCCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAAtata > 1:1205046/1‑100 (MQ=255)
aCCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGAGATCGGAAgagcacacgt > 1:4015856/1‑91 (MQ=255)
ccTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAg > 1:1047361/1‑100 (MQ=255)
ccTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAg > 1:1231469/1‑100 (MQ=255)
cTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAgg > 1:2489201/1‑100 (MQ=255)
cTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAgg > 2:464101/1‑100 (MQ=255)
cTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAg < 2:2582400/99‑1 (MQ=255)
tCCCAATGGATTCTATGAGATGGGAGATAAAAATTATAAGTTACGAAATCAAAATTTGCGACATCTTCAAAGTCGTTGCGAT‑GGAAGGACAATATAAggg < 2:3358478/100‑1 (MQ=255)
tCCCAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAggg < 2:4029299/100‑1 (MQ=255)
cacAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAggg < 2:2341868/97‑1 (MQ=255)
ccAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGgcg > 2:3398331/1‑100 (MQ=255)
ccAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGgcg > 1:3834017/1‑100 (MQ=255)
ccAATGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGgcg > 1:2768001/1‑100 (MQ=255)
ccAATGGATTCTATGAGATGGGAGATAAAAAGCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGgcg < 2:454964/100‑1 (MQ=255)
cAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGgcgc < 1:860409/100‑1 (MQ=255)
aaTGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCt < 2:1056965/100‑1 (MQ=255)
tGGATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCa > 1:2419576/1‑100 (MQ=255)
gATTCTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAAc > 1:207005/1‑100 (MQ=255)
cTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTgg > 2:2268332/1‑100 (MQ=255)
cTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTgg > 2:1479179/1‑100 (MQ=255)
cTATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTAAACGTgg > 1:3793897/1‑100 (MQ=255)
tATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTggg > 1:1942027/1‑100 (MQ=255)
tATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTggg < 1:4123658/100‑1 (MQ=255)
tATGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTggg > 1:60525/1‑100 (MQ=255)
aTGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTgggg > 2:1536780/1‑100 (MQ=255)
tGAGATGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGc > 1:3267743/1‑100 (MQ=255)
agaTGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa > 1:1874567/1‑100 (MQ=255)
agaTGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa > 1:2080761/1‑100 (MQ=255)
gaTGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaa > 1:850205/1‑100 (MQ=255)
gaTGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaa > 1:2314825/1‑100 (MQ=255)
tGGGAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAAt > 2:2135144/1‑100 (MQ=255)
gggAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATg < 2:1738572/100‑1 (MQ=255)
gggAGATAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATg > 2:1131935/1‑100 (MQ=255)
gagaTAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCg < 2:1380335/100‑1 (MQ=255)
gaTAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag > 1:3283749/1‑100 (MQ=255)
gaTAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag < 2:4128805/100‑1 (MQ=255)
tAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagga > 1:659297/1‑100 (MQ=255)
tAAAAATCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagga > 1:749140/1‑100 (MQ=255)
aaaaaTCATAAGTTACGAAATCAAAATTTGCGACATCCTTAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGACAAATg > 2:2500894/1‑93 (MQ=255)
aTCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATc < 1:3089056/99‑1 (MQ=255)
aTCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCg < 1:3640453/100‑1 (MQ=255)
aTCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCg > 1:4050772/1‑100 (MQ=255)
tCATAAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGc < 1:1732390/100‑1 (MQ=255)
|
GTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAT‑GGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGC > NC_000913/2564428‑2564620
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
