Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
254,727 |
A→C |
100% |
G330G (GGT→GGG) |
pepD ← |
aminoacyl‑histidine dipeptidase (peptidase D) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 254,727 | 0 | A | C | 59.1%
| 102.9
/ 190.6
| 161 | G330G (GGT→GGG) | pepD | aminoacyl‑histidine dipeptidase (peptidase D) |
| Reads supporting (aligned to +/- strand): ref base A (37/28); new base C (40/54); total (78/83) |
| Fisher's exact test for biased strand distribution p-value = 7.90e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.72e-01 |
Only 100 of 169 total aligned reads displayed.
AGGCAGTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGCCAG > NC_000913/254629‑254825
|
aGGCAGTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCacac < 1:852332/100‑1 (MQ=255)
ggCAGTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCAcccc < 2:3716127/100‑1 (MQ=255)
cAGTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGATTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCg > 2:173398/1‑99 (MQ=255)
gTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGt > 2:1093317/1‑98 (MQ=255)
tGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCg < 1:3521703/100‑1 (MQ=255)
aTTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCgggg > 2:63521/1‑100 (MQ=255)
aTTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCgggg < 1:1436039/100‑1 (MQ=255)
ttCTACTTTATTGTCGATCATGGTCACCTCACCGACGTTCAGTGATGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGt < 2:288643/99‑1 (MQ=255)
tACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCg < 1:2446013/100‑1 (MQ=255)
cGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGAACGGGGTgattcg < 1:3430663/100‑6 (MQ=255)
cGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGtt < 1:129227/100‑1 (MQ=255)
gTTATTGTCAGTCATGGTCACCACACCTACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTc < 2:90260/100‑1 (MQ=255)
gTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTc < 1:1575076/100‑1 (MQ=255)
gTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTc > 1:214003/1‑100 (MQ=255)
ttATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGTGTTACGAATCACCCCGTTCGGGGTGGCGTTca < 1:3921716/100‑1 (MQ=255)
ttATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGAACGGGGTgattcgta < 2:2053403/100‑8 (MQ=255)
tATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTcag < 1:2208877/100‑1 (MQ=255)
aTTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTcagc < 2:3405490/100‑1 (MQ=255)
aTTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTcagc < 2:946614/100‑1 (MQ=255)
aTTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTcagc < 1:2644209/100‑1 (MQ=255)
aTTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTcagc < 1:4131008/100‑1 (MQ=255)
tGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTcagcag > 1:3211856/1‑100 (MQ=255)
tGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTcagcag < 2:1002223/100‑1 (MQ=255)
gtcagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGa > 2:420291/1‑100 (MQ=255)
gtcagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGa > 2:751273/1‑100 (MQ=255)
gtcagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTcagcag > 1:2812650/1‑99 (MQ=255)
gtcagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGa > 2:140886/1‑100 (MQ=255)
tcggtcaTGGTCACCACACCGACGTTCAGTGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCGCCCCGTTCGGGGTGGCGTTCAGCAGAc < 2:3243498/97‑1 (MQ=255)
cagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACg < 1:1902815/100‑1 (MQ=255)
cagtcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACg < 2:2352660/100‑1 (MQ=255)
cagtcaTGGTCACCACACCGACGTTCAGGGAGGGTTCAACCACACCTTTGGCTACATCGGAGTTACGAATGACACCGTTCGGGGTGGCGTTCAGCAGACg > 2:2479737/1‑100 (MQ=255)
atctcaTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACg < 1:627922/97‑1 (MQ=255)
gtcaTGGTCACCACACCGACCTTCAGGGAGGTATCAACCACACCTTTGGCCACATCGGCGATACGAATCACCCCCTTCTGGCTAGCGTTCAGCAGACGaa > 2:586375/1‑100 (MQ=255)
tcaTGGTCACCACACCGACGTTCAGGGCGGTTTCCACCACACCTGTGGCTACATCGGAGTTCCGCATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAAt < 2:821364/100‑1 (MQ=255)
caTGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATa > 2:2954792/1‑100 (MQ=255)
ggTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAg > 1:2962495/1‑100 (MQ=255)
gTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTCCATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAgg > 2:2597645/1‑100 (MQ=255)
gTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAgg < 1:2039479/100‑1 (MQ=255)
gTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCCTTGGCTACATCGGAGGTACGAATCACACCGTTCGGGTTGGCGTTCAGCAGACGa > 2:1807533/1‑93 (MQ=255)
tCACCACACCGACGTTCAGTGAGGTTTCCACCACACCTTTGGCTACATCTGAGTTACGAAACACCCCTTTCCGGGTGCCGTTCACCAGACGAATAAAgg < 2:2025227/99‑1 (MQ=255)
tCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAgg > 2:4066268/1‑99 (MQ=255)
ccacACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATc > 1:825263/1‑100 (MQ=255)
cacTGAGGTTCAGGGAGGTTTCAACCATACCTTTGGCTACATCGGAGTTACGAAGCACACCGTTCGGGGTGGCGTTCAGTAGATGAATAAAGGTATcgc < 2:1232914/99‑1 (MQ=255)
acCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATcgcg < 1:2662629/99‑1 (MQ=255)
ccGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCgag > 1:1592302/1‑100 (MQ=255)
ccGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCgag > 1:1528668/1‑100 (MQ=255)
ccGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCgag < 2:21007/100‑1 (MQ=255)
gACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGAt < 2:2762620/100‑1 (MQ=255)
gTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGAGTTc < 2:463778/100‑1 (MQ=255)
ttCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCg < 1:173399/100‑1 (MQ=255)
ttCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCg < 1:476296/100‑1 (MQ=255)
ttCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGAGTTCg > 2:1333732/1‑100 (MQ=255)
tCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGc < 1:2325169/100‑1 (MQ=255)
tCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGc < 2:527650/100‑1 (MQ=255)
cAGGGAGGTTTTAACCACAACTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCa < 2:1732509/100‑1 (MQ=255)
cAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCa > 1:1223375/1‑100 (MQ=255)
gggAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAAt > 2:453103/1‑100 (MQ=255)
ggAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATc < 1:3610184/100‑1 (MQ=255)
ggAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATc > 2:184807/1‑100 (MQ=255)
aGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAg < 1:184808/100‑1 (MQ=255)
ggTTTCAAACACACCTTTGGCGACATAGGAGTTACGAATCACCCCCTTGGGGGTGGCGGTCAGCAGACGAATAAAGGGATCGAGAGATTGCGCAAtacg > 2:1938925/1‑96 (MQ=255)
gTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAcgg > 2:556912/1‑100 (MQ=255)
tttCGACCACGCCGTGGGCTACATCGTAGTGACGAATCACCCCGAGCGGGGTGGCGCTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGc < 2:3207231/100‑1 (MQ=255)
ttCAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATACAGGTATCGCGAGATTTCGCAATCAGGGCa > 1:1171634/1‑100 (MQ=255)
cAACCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGc > 1:370278/1‑100 (MQ=255)
aaCCACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCt > 2:2375420/1‑100 (MQ=255)
aCCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCtt > 1:3453457/1‑100 (MQ=255)
ccACACCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGTTATCGCGAGAGTTCGCAATCAGGGCAGCtct > 1:1105438/1‑98 (MQ=255)
acacCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTAt < 2:1407949/100‑1 (MQ=255)
cacCTTTGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATc < 1:3006145/100‑1 (MQ=255)
ccTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGt > 1:1872193/1‑100 (MQ=255)
tttGGCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTc < 2:364109/100‑1 (MQ=255)
ggCTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCt < 2:4000616/100‑1 (MQ=255)
cTACATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTAc > 2:3323210/1‑100 (MQ=255)
aCATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACag < 2:1509906/100‑1 (MQ=255)
aCATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACag < 1:1800435/100‑1 (MQ=255)
aCATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACag < 2:2037308/100‑1 (MQ=255)
cATCGGAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACaga > 2:21302/1‑100 (MQ=255)
cGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTc < 1:2846326/100‑1 (MQ=255)
ggcgTTACGAATCACCCTGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACagag < 2:3338779/94‑1 (MQ=255)
ggAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTcc > 2:38624/1‑100 (MQ=255)
ggAGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTcc < 2:3045827/100‑1 (MQ=255)
aGTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAg < 1:751279/100‑1 (MQ=255)
gTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATACAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGc < 2:2642970/100‑1 (MQ=255)
gTTACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGc > 2:3138/1‑100 (MQ=255)
gTTACGAATCACACGGTTCGGGGTGGCGTTGAGCAGAAGAATAAAGGTATGGCGAGATTTCGCAATAAGCGCAGCTGTATCGTTAGCTACagagacaag > 2:3467009/1‑94 (MQ=255)
gTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGc > 1:1038034/1‑100 (MQ=255)
ttACGAATCACCCCGTTCGGGGTGGGGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGca < 2:1976672/100‑1 (MQ=255)
ttACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGca < 1:1816475/100‑1 (MQ=255)
tACGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGcaa < 1:1273314/100‑1 (MQ=255)
aCGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGcaac > 1:2556172/1‑100 (MQ=255)
aCGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGcaac > 1:3874143/1‑100 (MQ=255)
cGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGcaaca < 1:3554787/100‑1 (MQ=255)
cGAATCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGcaaca > 2:2970400/1‑100 (MQ=255)
aTCACCCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAgg < 1:1022030/100‑1 (MQ=255)
tCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGc > 2:1919665/1‑100 (MQ=255)
tCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGc > 1:2347116/1‑100 (MQ=255)
caccCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGcc > 2:2789664/1‑100 (MQ=255)
cacaCCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGcc > 1:1326769/1‑100 (MQ=255)
acacCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGCCa < 1:3894303/100‑1 (MQ=255)
|
AGGCAGTGAATTTCTACGTTATTGTCAGTCATGGTCACCACACCGACGTTCAGGGAGGTTTCAACCACACCTTTGGCTACATCGGAGTTACGAATCACACCGTTCGGGGTGGCGTTCAGCAGACGAATAAAGGTATCGCGAGATTTCGCAATCAGGGCAGCTTTATCGTTCGCTACAGAGTCCAGCAACAAGGCCAG > NC_000913/254629‑254825
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
