Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F142 I0 R1
|
175 |
91.2 |
4812830 |
94.5% |
4548124 |
99.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
343,467 |
A→C |
100% |
H195P (CAC→CCC) |
yahK → |
broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 343,467 | 0 | A | C | 53.9%
| 33.1
/ 110.3
| 87 | H195P (CAC→CCC) | yahK | broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
| Reads supporting (aligned to +/- strand): ref base A (20/20); new base C (23/24); total (43/44) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 |
TATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAAT > NC_000913/343373‑343564
|
tATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGa < 2:1107464/100‑1 (MQ=255)
ttCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATg < 1:1190348/100‑1 (MQ=255)
ttgccgcTACGTCTCTGGCAGGCCGGGCCGGCTAAAATAGTGCGCGTGGTCGTCATCGGCGGTCTTGGACATTTTGGGATTAAGCTGGCCCAcgcg < 2:2096941/94‑1 (MQ=255)
cgccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATggg > 1:491749/1‑100 (MQ=255)
cgccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATggg > 1:968387/1‑100 (MQ=255)
cgccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCAGCCTGGGACACATGGGGATTAAGCTGGCCCCcgc > 2:397341/1‑94 (MQ=255)
ccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATggggg < 1:1055311/100‑1 (MQ=255)
tACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGcaca > 1:901326/1‑100 (MQ=255)
tACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGcaca > 2:1779475/1‑100 (MQ=255)
aCGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACAt < 1:828157/100‑1 (MQ=255)
cACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACAtgtg > 1:1881736/1‑99 (MQ=255)
cTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATgtggtg > 2:2016575/1‑100 (MQ=255)
ggtcgggccgggTAAAAAAGTGGGCGGGGTCGGCAGCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCAttt < 1:537999/97‑1 (MQ=255)
ggccgggccgGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCAttt > 1:1809746/1‑100 (MQ=255)
ggccgggccgGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCAttt > 1:751711/1‑100 (MQ=255)
gccgggccggGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTa > 2:1411596/1‑100 (MQ=255)
ccgggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTAc < 2:1039359/100‑1 (MQ=255)
cgggccgggTCCAAAAGTGGGAGTGGTCGGTCTAGGCGGTGTGGGCCATATGGGGGTTAAGCTGGCACCAGAGATGGGGGCACATGTGGTGGAATTTAca > 2:478806/1‑99 (MQ=255)
ggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTAcc < 1:879837/98‑1 (MQ=255)
ggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCAc < 2:1721602/100‑1 (MQ=255)
ggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCAGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATAGGGGCACATGTGGTGGCATTTa < 2:717670/96‑1 (MQ=255)
ggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTg > 2:1919290/1‑100 (MQ=255)
gTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGa < 2:81517/100‑1 (MQ=255)
tAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAg < 1:983570/100‑1 (MQ=255)
aaaaaGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCACCCGCGCTGGGGGCACATATGGTGGCATTTACCACTTCTGAGGc > 2:2113449/1‑100 (MQ=255)
aaaaGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCa < 1:728874/100‑1 (MQ=255)
aaaaGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCa > 1:1646648/1‑100 (MQ=255)
aGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCaaaa > 1:35554/1‑100 (MQ=255)
ggCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAAcgcg < 2:1588475/100‑1 (MQ=255)
ggCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAAcgcg > 1:1397903/1‑100 (MQ=255)
gCGTGGTCGGCATCGACGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTCGCATTTACCCCTTCTGAGACAAAAcgc > 2:610557/1‑98 (MQ=255)
cGTGGTCGGCATCGGCTGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGaa < 2:1400174/100‑1 (MQ=255)
ggTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCg < 2:1412347/100‑1 (MQ=255)
ggTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCg < 1:407620/100‑1 (MQ=255)
tCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGc > 2:35015/1‑100 (MQ=255)
tCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGc < 1:2291118/100‑1 (MQ=255)
cGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCa < 2:1904196/100‑1 (MQ=255)
cGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCa > 1:1683527/1‑100 (MQ=255)
tCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGc > 2:1166608/1‑100 (MQ=255)
tCGGCGGTCTGGGACATAAAAGAAATAAGCAGGAACACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCaaaacc > 2:2086742/1‑98 (MQ=255)
ggcggTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGccc < 1:1835701/100‑1 (MQ=255)
ggcggTCTGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGcc > 2:1560011/1‑99 (MQ=255)
ggcggTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGccc > 1:1581390/1‑100 (MQ=255)
cggTCTGCGACATATGGGGATGATGGCGGCCCCCGCGTTGGGGGCATATGTTGTGGCATTCACCACTGCTGAGGCAAAGCTCGAAGCGGCAAAAGccccg < 2:1098069/100‑3 (MQ=255)
ggTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGTCAAAACGCGAAGCGGCAAAAGCCCTg < 1:2029003/99‑1 (MQ=255)
ggTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTgg > 2:796036/1‑100 (MQ=255)
gTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTggg > 1:1381626/1‑100 (MQ=255)
tCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTgggg < 1:595571/100‑1 (MQ=255)
cTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTggg > 2:946559/1‑98 (MQ=255)
tgtgACATATGGGGATTAAGCTAGCCAACGGAATGGGGGCACATGTGGTGACATATCCCACTTCTGAAGCAAAACGCGAAGCTGCAATAGCCCTGGGGGc < 2:2247924/97‑1 (MQ=255)
tGGGACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGc > 2:729566/1‑100 (MQ=255)
gggACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGcc > 1:1801421/1‑100 (MQ=255)
gggACATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGcc > 1:186761/1‑100 (MQ=255)
gACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGAGGCCGa > 1:937603/1‑100 (MQ=255)
cATATGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGACGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATg > 1:1652376/1‑100 (MQ=255)
cATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGACATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATg > 2:1643389/1‑100 (MQ=255)
atatGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGa < 1:1338030/100‑1 (MQ=255)
tatGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGaa > 1:1386681/1‑100 (MQ=255)
tatGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGaa > 2:277746/1‑100 (MQ=255)
tatGGGGATTAAGCTGGCACCAGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGAtaa > 2:973670/1‑97 (MQ=255)
tGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgt > 1:1444331/1‑100 (MQ=255)
tGGGGATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgt > 1:563406/1‑100 (MQ=255)
tGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgt < 2:627640/100‑1 (MQ=255)
gggATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttg < 2:2063845/100‑1 (MQ=255)
gggATTAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttg < 1:919493/100‑1 (MQ=255)
gggATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttg < 2:1381612/100‑1 (MQ=255)
gggATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttg > 2:2149093/1‑100 (MQ=255)
ggATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgt > 2:310741/1‑100 (MQ=255)
ggATTAAGCTGGCCCACGCGATGGGGGAACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgt > 2:311052/1‑100 (MQ=255)
gATTAAGCTGGCCCACGGGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgtt < 2:696187/100‑1 (MQ=255)
gATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgtt < 1:2105301/100‑1 (MQ=255)
gATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgtt < 1:2105331/100‑1 (MQ=255)
gATTAAGCGGGCCCCCGTGATGGGGGCACATGTGGTGTCATTTAAAAAAAATAAAAAAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgtt < 2:187445/100‑1 (MQ=255)
aTTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTa < 2:1987706/100‑1 (MQ=255)
ttAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgtt < 1:493673/98‑1 (MQ=255)
tAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAAc < 2:35553/100‑1 (MQ=255)
tAAGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAAc < 2:1397881/100‑1 (MQ=255)
tAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAAc < 1:929622/100‑1 (MQ=255)
tAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAAc < 2:161175/100‑1 (MQ=255)
aaGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACt < 1:1166619/100‑1 (MQ=255)
aaGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACt < 1:472936/100‑1 (MQ=255)
aGCTGGCCCCCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACt > 1:2086229/1‑99 (MQ=255)
ggCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACg > 1:607524/1‑99 (MQ=255)
gctcACGCGGTGGCGGCACATGTGGTGGCATTTACCACTTCTGAGGAGAAACGCGAAGCGGCAAAAGCCTTGGGGGCCGATTAAGTTGTTAACTCACga < 2:642289/96‑2 (MQ=255)
gCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCa < 1:1422017/100‑1 (MQ=255)
ccccCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCaa > 1:609290/1‑100 (MQ=255)
ccccCGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCaa > 1:1757842/1‑100 (MQ=255)
cccACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCaa > 1:860279/1‑100 (MQ=255)
ccACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAAt < 1:1738358/100‑1 (MQ=255)
|
TATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAAT > NC_000913/343373‑343564
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
