Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F133 I0 R1
|
200 |
171.4 |
8351354 |
94.3% |
7875326 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
356,492 |
A→G |
77.7% |
T108A (ACG→GCG) |
codA → |
cytosine/isoguanine deaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 356,492 | 0 | A | G | 77.7%
| 334.4
/ 79.8
| 164 | T108A (ACG→GCG) | codA | cytosine/isoguanine deaminase |
| Reads supporting (aligned to +/- strand): ref base A (20/17); new base G (50/77); total (70/94) |
| Fisher's exact test for biased strand distribution p-value = 1.32e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 165 total aligned reads displayed.
GGAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGAAGT > NC_000913/356397‑356589
|
ggAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCt > 1:3192465/1‑100 (MQ=255)
ggAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCt > 2:3649837/1‑100 (MQ=255)
ggAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCt > 2:1711974/1‑100 (MQ=255)
gAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTg < 1:2619089/100‑1 (MQ=255)
gAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTg < 1:92541/100‑1 (MQ=255)
gAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTg < 2:1106146/100‑1 (MQ=255)
aaTCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGa > 1:3487319/1‑100 (MQ=255)
tCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGaaa > 2:3170975/1‑100 (MQ=255)
gtccggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATgg < 1:3538208‑M2/93‑1 (MQ=255)
gtccggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATgg < 1:3907690‑M2/93‑1 (MQ=255)
tccggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGc > 1:3825769‑M2/7‑100 (MQ=255)
ccggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGc < 2:1304007‑M2/94‑1 (MQ=255)
ggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGa > 1:1044782‑M2/4‑100 (MQ=255)
ggcACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGAGCATGGCAAGCGCTGAAATGGCAGa > 2:3165021‑M2/4‑100 (MQ=255)
aCGCTGTTTGAAGGCAGTGAACGCTGGGCAGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCGGAAATGGCAGAttg > 2:2038827‑M2/1‑97 (MQ=255)
cGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGAttgc < 1:81225‑M2/100‑5 (MQ=255)
gCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGAttgcc < 1:3356048‑M2/100‑6 (MQ=255)
tttGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACg > 2:881517/1‑100 (MQ=255)
ttGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACgg < 2:3565950/100‑1 (MQ=255)
gAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCa < 1:1408567/100‑1 (MQ=255)
gAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCa > 1:3004722/1‑100 (MQ=255)
gAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCa < 1:2262265/100‑1 (MQ=255)
aaGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCAt < 1:2154320/100‑1 (MQ=255)
aaGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCAt > 1:1901729/1‑100 (MQ=255)
ggCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTc < 1:3316870/100‑1 (MQ=255)
ggCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTc < 1:1059084/100‑1 (MQ=255)
cATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGCCGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAg > 2:2766365/1‑100 (MQ=255)
cATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAg < 1:42455/100‑1 (MQ=255)
aTTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGc > 2:2345321/1‑100 (MQ=255)
ttGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCa < 2:63927/100‑1 (MQ=255)
gAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCAtg > 2:3077889/1‑100 (MQ=255)
aCGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCAtgtg < 2:1794368/100‑1 (MQ=255)
aCGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCAtgtg < 1:497831/100‑1 (MQ=255)
cGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGc > 1:1396476/1‑100 (MQ=255)
gCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCg < 1:2024769/100‑1 (MQ=255)
gCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCg < 1:589530/100‑1 (MQ=255)
gCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCg < 2:3824485/100‑1 (MQ=255)
gCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCg < 2:3079000/100‑1 (MQ=255)
cTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGt < 1:2577153/100‑1 (MQ=255)
tGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTa < 2:2643770/100‑1 (MQ=255)
tGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGATATGGCAGATTGCCAACGGCATTCAGCATGTGCg < 2:1242232/98‑1 (MQ=255)
ggCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTAc < 1:1130708/99‑1 (MQ=255)
gCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTAcc < 2:454833/99‑1 (MQ=255)
cgatctgcAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCa < 1:3772192/94‑1 (MQ=255)
ccGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCa < 1:3955498/100‑1 (MQ=255)
ccGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCa > 1:3685925/1‑100 (MQ=255)
gcgcAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTc < 1:3603481/100‑1 (MQ=255)
gcgcAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTc < 1:850735/100‑1 (MQ=255)
gcAACGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGCGCGTACCCCTGTCg > 2:589384/1‑99 (MQ=255)
gcAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCaagatcg > 2:3772164/1‑94 (MQ=255)
aaaGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATg < 1:3565967/100‑1 (MQ=255)
aaaGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATg > 2:2470508/1‑100 (MQ=255)
cGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTc < 2:3411007/100‑1 (MQ=255)
cGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTc > 2:122594/1‑100 (MQ=255)
gTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCg < 2:1380209/100‑1 (MQ=255)
ttattaACCCATGACGGTGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCgg < 1:1225919/100‑1 (MQ=255)
tattaACCCATGACGATGTGAATCAACGCGCGTGGCAGGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGa < 2:2810417/100‑1 (MQ=255)
tattaACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGa < 1:992064/100‑1 (MQ=255)
ttaACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATg < 1:618825/100‑1 (MQ=255)
ttaACCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATg < 1:2377213/100‑1 (MQ=255)
aaCCCATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCa > 2:1775220/1‑100 (MQ=255)
aaCCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCa < 1:3757057/100‑1 (MQ=255)
cccATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAAc > 1:3708533/1‑100 (MQ=255)
cccATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGAttgccatgcgcgttgtttcacatcgtcatgggttaataacgctttgcgctcg < 1:3380042‑M2/100‑53 (MQ=255)
cccATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAAc > 2:887122/1‑100 (MQ=255)
ccATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATAGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACg > 2:1877022/1‑100 (MQ=255)
cATGACGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGc > 1:1912493/1‑100 (MQ=255)
aCGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAAc < 2:926213/100‑1 (MQ=255)
aCGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAAc > 1:1468612/1‑100 (MQ=255)
cGATGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTCTCGGATGCAACGGTAACt > 2:2949050/1‑100 (MQ=255)
aTGTGAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgc < 1:2543547/100‑1 (MQ=255)
tgtgCAACAACGCGACTGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCACGAGCGTACAAGTGTCGATGTATCGGATGGGACGCTAACTg > 2:632238/1‑98 (MQ=255)
tgtgAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcg < 1:3740009/100‑1 (MQ=255)
tgtgAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcg > 1:2984905/1‑100 (MQ=255)
tgtgAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATTTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcn < 2:2268982/100‑2 (MQ=255)
tgtgAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcg > 2:3103433/1‑100 (MQ=255)
gtgAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcgc > 2:568791/1‑100 (MQ=255)
gtgAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTgcgc < 1:1979677/100‑1 (MQ=255)
tgAAACAACGCGCTTGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCt > 1:2835337/1‑100 (MQ=255)
tgAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTTCCCATGTCGATGTCTCGGATGCAACGCTAACTGCGCt > 2:4156475/1‑100 (MQ=255)
tgAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCt > 2:3353932/1‑100 (MQ=255)
gAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCt > 2:3999811/1‑99 (MQ=255)
gAAACAACGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTg > 2:3283389/1‑100 (MQ=255)
gAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATTTCGATGTTTCGGATGCACCGCTAACTgc > 2:1507640/1‑96 (MQ=255)
gAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGAATGTGCGTACCCATGACGATGTTTCGGATGCAAAGCTAACTGCGCt > 1:4100783/1‑99 (MQ=255)
aacaacGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGaa < 2:1205924/100‑1 (MQ=255)
aacaacGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGAGGTTTCGGATGCAACGCTAACTGCGCTGaa > 1:3098779/1‑100 (MQ=255)
aacGCGCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGc > 2:1722360/1‑100 (MQ=255)
cgcgCATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCaa < 1:1931358/100‑1 (MQ=255)
gcgcATGGCAAGCGCTGAAATGGCAGAttgccatgcgcgttgtttcacatcgtcatgggttaataacgctttgcgctcggcccagcgttcaatgccttca < 1:1163326‑M2/100‑74 (MQ=255)
gcgcATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCACGTGCGGACCCGGGTCGATGGTTGGGATGCAGCGCTAACTGCGCGGAAAGCaa > 2:3477533/1‑99 (MQ=255)
cgcATGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATg > 1:2220762/1‑100 (MQ=255)
gcATGGCAAGCGCTGAAATGGCAGAttgccatgcgcgttgtttcacatcgtcatgggttaataacgctttgcgctcggcccagcgttcaatgccttcaaa < 1:462124‑M2/100‑76 (MQ=255)
gcATGGCAAGCGCTGAAATGGCAGAttgccatgcgcgttgtttcacatcgtcatgggttaataacgctttgcgctcggcccagcgttcaatgccttcaaa < 1:2580799‑M2/100‑76 (MQ=255)
tGGCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTgg < 2:4129037/100‑1 (MQ=255)
ggCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGa > 1:3230773/1‑100 (MQ=255)
ggCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGa < 2:806145/100‑1 (MQ=255)
ggCAAGCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGa < 2:1158907/100‑1 (MQ=255)
ggCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGa < 2:2012546/100‑1 (MQ=255)
aaaCGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGAAGt < 2:4105958/100‑1 (MQ=255)
|
GGAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGAAGT > NC_000913/356397‑356589
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
