Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F133 I0 R1
|
200 |
171.4 |
8351354 |
94.3% |
7875326 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,809,610 |
A→G |
80.0% |
E77E (GAA→GAG) |
yniC → |
2‑deoxyglucose‑6‑P phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,809,610 | 0 | A | G | 80.0%
| 257.3
/ 52.0
| 119 | E77E (GAA→GAG) | yniC | 2‑deoxyglucose‑6‑P phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (14/10); new base G (45/50); total (59/60) |
| Fisher's exact test for biased strand distribution p-value = 3.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 120 total aligned reads displayed.
AGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTA > NC_000913/1809513‑1809706
|
cTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCggg < 1:3879048/100‑1 (MQ=255)
cTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCggg < 1:2091200/100‑1 (MQ=255)
cTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACggg > 2:1934157/1‑100 (MQ=255)
tGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGt < 1:1035869/100‑1 (MQ=255)
tGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGt < 1:3392720/100‑1 (MQ=255)
tGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGt < 2:3514851/100‑1 (MQ=255)
gACACCTTAGTTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTg < 1:32085/100‑1 (MQ=255)
gACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTg > 2:174143/1‑100 (MQ=255)
ccTTAGGTTTACGCATTGATATGGTGGTCGATCTTTGGTACTCCCGGCAACCGGGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGcc < 2:3348270/98‑1 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATTGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGccc < 1:1712620/99‑1 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCg > 1:3939330/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCg > 1:3421514/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCg > 1:2654003/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGCCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGATTATTGccc > 2:2680461/1‑99 (MQ=255)
cTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGt > 1:1089526/1‑100 (MQ=255)
cTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGt > 2:1688659/1‑100 (MQ=255)
cTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGt > 1:197940/1‑100 (MQ=255)
ttAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTg < 1:2402534/100‑1 (MQ=255)
ggTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCa > 2:2587642/1‑100 (MQ=255)
ttACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCAttt < 1:4012671/100‑1 (MQ=255)
tACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTc > 2:1078580/1‑100 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCAc < 2:445254/100‑1 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCAc > 1:3926874/1‑100 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCAc > 1:1343436/1‑100 (MQ=255)
gCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACt > 2:1650851/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTg > 1:2776702/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTg > 1:4060968/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTg < 1:2239292/100‑1 (MQ=255)
aTCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTgg < 2:2089327/100‑1 (MQ=255)
tCGATATGGTGGTCGATTTTTGTTACGTCCGGGAACCGTTGAATTGGCCAATCCGTCAGGAAGTAGTAGAGCGTGTTATTGCCCGTGCCATTTCAc < 2:1349359/96‑1 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTg > 2:2992750/1‑100 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTg < 2:1069588/100‑1 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTg > 2:2251725/1‑100 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGCTATTGCCCGTGCCATTTCACTGGTTg < 2:3768294/100‑1 (MQ=255)
atGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAag < 1:1705776/100‑1 (MQ=255)
tggtggTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga < 2:1779170/100‑1 (MQ=255)
tggtggTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga > 1:1015214/1‑100 (MQ=255)
tggtggTCGACCTATGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga > 2:2619591/1‑100 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCATGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAagan < 2:850760/100‑2 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAagag < 1:4035987/100‑1 (MQ=255)
gtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAgaga > 1:497768/1‑100 (MQ=255)
tggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGac < 1:867176/100‑1 (MQ=255)
tCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACg > 1:3380209/1‑100 (MQ=255)
tCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACg > 1:3078572/1‑100 (MQ=255)
cGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGCCACg > 2:3647991/1‑99 (MQ=255)
gATCTTTTGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGACGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTc > 2:555950/1‑100 (MQ=255)
gATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTc > 2:1959166/1‑100 (MQ=255)
gATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTc > 1:3301261/1‑100 (MQ=255)
gATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTc > 1:75715/1‑100 (MQ=255)
gATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGt > 1:1339129/1‑99 (MQ=255)
aTCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTcc > 2:1362932/1‑100 (MQ=255)
tttGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCatt > 1:3378134/1‑100 (MQ=255)
ggTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCattatt < 2:3012384/100‑1 (MQ=255)
ggTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCagtatt < 2:3012296/100‑1 (MQ=255)
tACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTAc < 1:3574762/100‑1 (MQ=255)
tACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTAc < 2:1667539/100‑1 (MQ=255)
gCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTAcc < 2:244400/98‑1 (MQ=255)
gCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAg < 1:3059953/100‑1 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg > 1:701308/1‑100 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg > 2:2092327/1‑100 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg > 1:1066865/1‑100 (MQ=255)
cGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCg > 1:1612646/1‑100 (MQ=255)
gCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTg > 1:2225658/1‑100 (MQ=255)
aaCCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTgcg < 1:1083714/100‑1 (MQ=255)
aCCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACTTCCATTATTACCAGGCGTgcgc < 1:4149562/100‑1 (MQ=255)
cGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGa > 1:70262/1‑100 (MQ=255)
tGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAg > 2:862189/1‑100 (MQ=255)
tGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAg < 1:1362940/100‑1 (MQ=255)
tGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAg < 2:3373274/100‑1 (MQ=255)
ggAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGc < 1:2587657/100‑1 (MQ=255)
ggAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGc > 2:2071041/1‑100 (MQ=255)
aaTGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCg < 2:3069808/100‑1 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGc < 1:1507901/100‑1 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg > 1:2950490/1‑100 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg > 2:2783763/1‑100 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg > 2:2599352/1‑100 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg < 1:2071052/100‑1 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg < 1:719109/100‑1 (MQ=255)
ccAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGt > 1:4147462/1‑100 (MQ=255)
cAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGtt > 1:4151859/1‑100 (MQ=255)
cAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCACTATTACCAGGCGTGCGCTAAGCCGTTGCgat < 1:2806166/100‑3 (MQ=255)
aaGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTa < 1:3525081/100‑1 (MQ=255)
ccGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGc < 2:1459525/100‑1 (MQ=255)
cGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCa > 1:3740773/1‑100 (MQ=255)
gTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaa < 1:1319082/100‑1 (MQ=255)
gTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaa > 1:949496/1‑100 (MQ=255)
gTCAGGAAGGAGTGGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGc < 2:868173/98‑1 (MQ=255)
tCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaaa < 1:2909810/100‑1 (MQ=255)
cAGGAAGTTGTCGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAg < 2:3432658/100‑1 (MQ=255)
cAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaacg < 1:2827679/100‑3 (MQ=255)
aGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCATGCGTGCGCGAAGCCGTTGCGTTATGCAAAGa < 2:1673610/100‑1 (MQ=255)
gAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCACGCGTGCGCGAAGCCGTTGCCTTATGCAaacaac > 2:3229572/1‑100 (MQ=255)
aaGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACa > 1:4164132/1‑100 (MQ=255)
agtagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGt > 2:380937/1‑100 (MQ=255)
gtagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGtt < 2:3301238/100‑1 (MQ=255)
gtagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGtt < 2:2789075/100‑1 (MQ=255)
tagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGttt < 2:197937/100‑1 (MQ=255)
tagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGtt < 1:1391976/99‑1 (MQ=255)
agagCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTa > 1:1343613/1‑100 (MQ=255)
agAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTa > 2:796542/1‑100 (MQ=255)
|
AGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTA > NC_000913/1809513‑1809706
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
