Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,809,610 |
A→G |
42.3% |
E77E (GAA→GAG) |
yniC → |
2‑deoxyglucose‑6‑P phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,809,610 | 0 | A | G | 42.3%
| 49.4
/ 175.0
| 142 | E77E (GAA→GAG) | yniC | 2‑deoxyglucose‑6‑P phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (50/32); new base G (31/29); total (81/61) |
| Fisher's exact test for biased strand distribution p-value = 3.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.90e-01 |
Only 100 of 142 total aligned reads displayed.
AGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTAT > NC_000913/1809513‑1809707
|
aGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCg < 2:3027023/100‑1 (MQ=255)
aGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCg < 1:3311541/100‑1 (MQ=255)
cTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACggg > 2:87194/1‑100 (MQ=255)
gCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGtt > 2:370745/1‑100 (MQ=255)
cGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTAt > 2:1798742/1‑100 (MQ=255)
cGGACACCGTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTa < 1:412156/99‑1 (MQ=255)
ggACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTAtt > 1:4176864/1‑100 (MQ=255)
cacCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGcc > 2:812998/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCg > 2:508940/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCg > 2:1335759/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCg > 2:893703/1‑100 (MQ=255)
ccTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCg > 2:1517006/1‑100 (MQ=255)
ttAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTg < 2:3454865/100‑1 (MQ=255)
ttAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTg < 1:1986209/100‑1 (MQ=255)
tAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGc < 2:1245630/100‑1 (MQ=255)
ggTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCa > 2:3630344/1‑100 (MQ=255)
ggTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTACCCGTGcc > 2:1719213/1‑99 (MQ=255)
ntttACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTgtc > 1:2057685/2‑96 (MQ=255)
gTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCCGGAAGTAGTAGAACGGGTTATTGCCCGTGCCa > 1:2207107/1‑99 (MQ=255)
gTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGACGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCAt < 1:2627181/100‑1 (MQ=255)
cGCATCGATATGGTGGTCGCTCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCAttt > 1:1868727/1‑97 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCAc < 1:452000/100‑1 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCAc > 1:3338093/1‑100 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCAc < 1:1615354/100‑1 (MQ=255)
gCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACt < 1:1983651/100‑1 (MQ=255)
gCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACt > 2:2504455/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTg > 2:2364931/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTg > 1:2951685/1‑100 (MQ=255)
cATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTg > 1:3149538/1‑100 (MQ=255)
tCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGt > 2:1049884/1‑100 (MQ=255)
cGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGtt < 1:779018/100‑1 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTg > 2:1763843/1‑100 (MQ=255)
gATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTg > 1:3847701/1‑100 (MQ=255)
atatGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGa > 2:2824988/1‑100 (MQ=255)
atGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAag > 1:592092/1‑100 (MQ=255)
tggtggTCGATGTTTGGTTCGCCAAGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGAAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAag > 1:2708061/1‑99 (MQ=255)
tggtggTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga < 1:2819006/100‑1 (MQ=255)
tggtggTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTACAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga < 1:2280592/100‑1 (MQ=255)
nggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAaga > 2:1752856/2‑100 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAagag < 2:450818/100‑1 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAagag > 1:56977/1‑100 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAagag > 1:2873086/1‑100 (MQ=255)
ggtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAagag > 1:373989/1‑100 (MQ=255)
gtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAgaga < 2:318492/100‑1 (MQ=255)
gtggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAgaga > 2:1284929/1‑100 (MQ=255)
ggtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGac > 1:1499126/1‑99 (MQ=255)
gggcGATCTTGGGTACGCCCGGCGCCTGTCGAGTGGGCCAAGCCGTCAGGGAGTGGGAGAACGGGTTATTGCCCGGGCCATTGCACGGGTTGAAGAGaca < 1:2696008/97‑1 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGacac > 2:431835/1‑100 (MQ=255)
tCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGACCGTGCCATTTCACTGGTTGAAGAGACACg > 2:1031235/1‑100 (MQ=255)
tCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCa < 2:707632/100‑1 (MQ=255)
cTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCat < 2:2229/100‑1 (MQ=255)
tGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCattat < 2:2736418/100‑1 (MQ=255)
tGGTACGCCCGGCAACCATGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCattan < 1:1341882/100‑2 (MQ=255)
ggTACGCCCGGCAACCGTGGAATGGGCCACGCCGTCAGGAAGTAGTAGCACGGGTTATTGCCCGTGCCATTTCACTGGTTGAACAGACACGTCCctt > 1:3705506/1‑97 (MQ=255)
ggTACGCCCGGCAACCGTGGAAGGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCattatt < 2:1616388/100‑1 (MQ=255)
tctcGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCAttatta < 2:2589998/97‑1 (MQ=255)
gTACGCCCGCGAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGGGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCAttatta < 1:1796781/100‑1 (MQ=255)
tACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTAc < 1:1915390/100‑1 (MQ=255)
cGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCAttattaaga > 1:2589990/1‑97 (MQ=255)
gCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTGTTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAg > 1:1108603/1‑100 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg > 2:2728703/1‑100 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg > 1:3056675/1‑100 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg < 2:2317812/100‑1 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg < 2:215046/100‑1 (MQ=255)
cccGGAAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAgg < 1:1105548/100‑1 (MQ=255)
ccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGc > 1:3175474/1‑100 (MQ=255)
agccGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTgcg < 1:3340412/98‑1 (MQ=255)
aCCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTgcgc > 1:1248815/1‑100 (MQ=255)
cGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGa > 1:3413511/1‑100 (MQ=255)
cGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGa > 2:3835824/1‑100 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGc > 2:4090549/1‑100 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGc > 2:4105410/1‑100 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCAGTATTACCAGGCGTGCGCGAAGCCGTTg > 2:2987792/1‑99 (MQ=255)
ccAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGt < 2:3843562/100‑1 (MQ=255)
ccAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGt < 2:373991/100‑1 (MQ=255)
cAAGCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGtt < 2:2915013/100‑1 (MQ=255)
aaGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTa < 2:2577554/100‑1 (MQ=255)
aGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTAt > 1:2103189/1‑100 (MQ=255)
gCCGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATg > 2:1698565/1‑100 (MQ=255)
gCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATg < 1:256819/100‑1 (MQ=255)
gCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATg > 1:1743237/1‑100 (MQ=255)
cGTCAGGAAGTAGTAGAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCa > 1:647901/1‑100 (MQ=255)
gTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaa < 1:879932/100‑1 (MQ=255)
gTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCaa > 2:1462625/1‑100 (MQ=255)
cAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAg > 2:3022847/1‑100 (MQ=255)
ggAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGaa > 1:1588014/1‑100 (MQ=255)
ggAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGaa > 2:3915838/1‑100 (MQ=255)
ggAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGaa > 2:159303/1‑100 (MQ=255)
gAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAAc < 1:3409263/100‑1 (MQ=255)
aaGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACa > 1:3524107/1‑100 (MQ=255)
tagtagAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAgg < 2:2614791/100‑1 (MQ=255)
agtagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAgg < 1:1325890/99‑1 (MQ=255)
agtagAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGt < 2:1574327/100‑1 (MQ=255)
agtagAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGt > 1:1877266/1‑100 (MQ=255)
agtagAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGt > 2:1226567/1‑100 (MQ=255)
gtagAGCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGtt > 2:3329803/1‑100 (MQ=255)
gtagAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGtt > 2:3894828/1‑100 (MQ=255)
tagAGCGGGTTATTGCCGGCGCCCTTGCTCTGGTTGAAGAGACACGCCCATTACTACCAGGAGTGCGCGCAGCGGTTGCGGTATGCAAAGGACAAGGttc > 1:3062670/1‑99 (MQ=255)
gAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTAt > 2:1251615/1‑100 (MQ=255)
gAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAACCCGTTGCGTTATGCAAAGAACAAGGTTTAt > 2:2117674/1‑100 (MQ=255)
|
AGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTAT > NC_000913/1809513‑1809707
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
