Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F133 I0 R1
|
200 |
171.4 |
8351354 |
94.3% |
7875326 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,509,578 |
C→T |
76.6% |
intergenic (‑152/‑52) |
glk ← / → yfeO |
glucokinase/putative ion channel protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,509,578 | 0 | C | T | 76.6%
| 269.9
/ 97.8
| 163 | intergenic (‑152/‑52) | glk/yfeO | glucokinase/putative ion channel protein |
| Reads supporting (aligned to +/- strand): ref base C (22/16); new base T (66/59); total (88/75) |
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.71e-01 |
Only 100 of 169 total aligned reads displayed.
CTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCC > NC_000913/2509479‑2509677
|
cTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGcc < 1:3114108/100‑1 (MQ=255)
gggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTtttt < 2:1694781/100‑1 (MQ=255)
ggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCtttttt > 1:3104139/1‑100 (MQ=255)
ggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCtttttt > 1:1530451/1‑100 (MQ=255)
ggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCttttt > 1:2655916/1‑100 (MQ=255)
gCATAACAACCACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGATTCAGCACCAATTGCAGCGATGCTTTTTTg < 2:2731723/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTg < 1:3446277/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTg < 2:3038313/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTg < 1:1317645/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTg < 1:1145630/100‑1 (MQ=255)
cATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGc > 1:1217033/1‑100 (MQ=255)
aacaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGc > 2:2793918/1‑97 (MQ=255)
aacaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAg > 2:3987998/1‑100 (MQ=255)
aacaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAg > 1:2384249/1‑100 (MQ=255)
aacaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAg > 1:1433582/1‑100 (MQ=255)
acaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGc > 2:2847169/1‑100 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTTCattct > 2:595662/1‑96 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCt < 1:3944842/100‑1 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCt > 2:3897088/1‑100 (MQ=255)
acaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTg > 2:2956579/1‑99 (MQ=255)
gCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCaaa < 1:3561971/100‑1 (MQ=255)
ccGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACTAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAAc < 2:1639331/100‑1 (MQ=255)
ccGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAAc > 1:864013/1‑100 (MQ=255)
cGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACt > 1:1530624/1‑100 (MQ=255)
gtaaaGGCAGGCTCCCGGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTa < 1:3904128/98‑1 (MQ=255)
ggAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTa > 2:665024/1‑100 (MQ=255)
aaaGGCAGGCTTCCTGTAAATATCGATCTGGGGCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAg < 1:768783/100‑1 (MQ=255)
aaaGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAg < 2:427877/100‑1 (MQ=255)
aaaGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAg < 2:2240893/100‑1 (MQ=255)
aggcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTa < 2:2327930/100‑1 (MQ=255)
ggcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTAt > 2:2780352/1‑100 (MQ=255)
gcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATc < 2:2613325/100‑1 (MQ=255)
caggcTCCCTGTAAATAACGATCTGGGTAACAAAATTACTTTATCGTTTCAGCACCAATGATAGCGATGCTTTTTTACAAGTTGGACAAGCTCAatat > 2:1267121/1‑98 (MQ=255)
aggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTg < 2:3726088/100‑1 (MQ=255)
ccTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCg < 2:617895/100‑1 (MQ=255)
cTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCg > 2:3625435/1‑99 (MQ=255)
cTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGc > 2:936131/1‑100 (MQ=255)
cTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGTATTCTGTGTAAACTAAGTATCTGAccc > 2:1177939/1‑97 (MQ=255)
tGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCa < 1:665028/100‑1 (MQ=255)
aaTATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACACCGCATAAg > 2:1061626/1‑100 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg < 2:1073698/100‑1 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg > 1:688331/1‑100 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg < 1:3403143/100‑1 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg > 1:1028358/1‑100 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg < 1:1454268/100‑1 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTAGCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAATTAAGTATCTGACCCCGCATAAg < 2:1021279/99‑1 (MQ=255)
tatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGa > 2:2157049/1‑100 (MQ=255)
tatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGa < 1:1470930/100‑1 (MQ=255)
atCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGaa > 1:4147247/1‑100 (MQ=255)
tCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAAt < 2:3180842/100‑1 (MQ=255)
cGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCACGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATa < 2:2575454/100‑1 (MQ=255)
cGATCCGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATa < 2:3826548/100‑1 (MQ=255)
gATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAg > 1:1693726/1‑100 (MQ=255)
tCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGaa < 1:390631/100‑1 (MQ=255)
tCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGaa < 1:353637/100‑1 (MQ=255)
tCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGaa < 2:1901059/100‑1 (MQ=255)
cTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAAc > 1:2949913/1‑100 (MQ=255)
cTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATCCTTTTTTGAAAGTTGGGCAGCCTAAGTATCTTACCCGTCATAAGGCATAGAAc > 2:552604/1‑100 (MQ=255)
tGGGTCACACAATTACTTTATCGTGTCAGCACCAATTGCAGCGATGCTTTGTTGCAAGCTGGGCAAACTAAGTAGCTGACCCCGCATAAGGAATAGAACa < 2:880284/100‑1 (MQ=255)
gggTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAt > 2:1989101/1‑100 (MQ=255)
ggTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATg < 1:2252852/100‑1 (MQ=255)
ggTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATg > 1:1691228/1‑100 (MQ=255)
gTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGc > 1:1903913/1‑100 (MQ=255)
acacaATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTcc < 2:1909700/100‑1 (MQ=255)
cacaATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCa < 2:1701065/100‑1 (MQ=255)
caATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATc > 2:2661530/1‑100 (MQ=255)
caATTACTTTATCGTTTCAGCAACAATTGCAGCGATGCTTTTTTTCATGTTGGGACAAATAAGTATGTGCCCCCGCATAAGTAATAGAACacacttc > 2:2006391/1‑91 (MQ=255)
aaTTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATcc < 2:3048833/100‑1 (MQ=255)
aTTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCcg > 1:3210063/1‑100 (MQ=255)
tACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCATGATGCGCAAACTAAGTATCTGACCCCGTATAAGGAATAGAACATGCTCCAttctc > 2:158633/1‑95 (MQ=255)
aCTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGa < 2:1877768/100‑1 (MQ=255)
cTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAg > 1:3386848/1‑100 (MQ=255)
cTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAg > 1:2347722/1‑100 (MQ=255)
tttATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGc < 1:155864/100‑1 (MQ=255)
ttATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGcc < 2:2256859/100‑1 (MQ=255)
tATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCa > 1:2638687/1‑100 (MQ=255)
cGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGa < 1:3673176/99‑1 (MQ=255)
tttCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAAcc < 2:714473/100‑1 (MQ=255)
ttCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCa > 1:780623/1‑100 (MQ=255)
ttCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCa < 2:3415704/100‑1 (MQ=255)
tCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAt > 1:3228455/1‑100 (MQ=255)
tCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAt > 1:2178126/1‑100 (MQ=255)
aGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgt > 2:2125750/1‑100 (MQ=255)
aGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgt < 1:1376643/100‑1 (MQ=255)
gCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGAATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgtt > 1:1117831/1‑100 (MQ=255)
gCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGACTAGAACATGCTCCATCCGCGAGCCAGAACCAtgtt > 2:2759641/1‑100 (MQ=255)
gCACCAATTGCAGCGATGCCTTTTCGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgtt > 2:2445224/1‑100 (MQ=255)
cACCCATTGCAGCGATGCTTGTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCACCCGCGAGCCAGAACCAtgttg < 1:57019/100‑1 (MQ=255)
cACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgttg < 2:3372352/100‑1 (MQ=255)
cACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAGTAGAACATGCTCCATCCGCGAGCCAGAACCAtgttg > 2:2294903/1‑100 (MQ=255)
cAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGtta < 1:3008284/100‑1 (MQ=255)
aTTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGttatt > 1:435646/1‑100 (MQ=255)
cAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCCTCCGCTAGCCAGAACCATGTTGTTATTATCg > 2:1757701/1‑100 (MQ=255)
cAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGACCCAGAACCATGTTGttatta < 2:2535736/97‑1 (MQ=255)
gCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCt > 1:2590339/1‑100 (MQ=255)
gCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCt > 2:49660/1‑100 (MQ=255)
cGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGAATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTc < 1:993454/100‑1 (MQ=255)
gATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTcc < 1:2697972/100‑1 (MQ=255)
gCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCccg > 2:777730/1‑100 (MQ=255)
cTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCccgcc < 1:843943/100‑1 (MQ=255)
|
CTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCC > NC_000913/2509479‑2509677
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
