Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,509,578 |
C→T |
41.9% |
intergenic (‑152/‑52) |
glk ← / → yfeO |
glucokinase/putative ion channel protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,509,578 | 0 | C | T | 41.9%
| 98.9
/ 198.0
| 174 | intergenic (‑152/‑52) | glk/yfeO | glucokinase/putative ion channel protein |
| Reads supporting (aligned to +/- strand): ref base C (55/46); new base T (37/36); total (92/82) |
| Fisher's exact test for biased strand distribution p-value = 6.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 |
Only 100 of 178 total aligned reads displayed.
CTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGC > NC_000913/2509479‑2509676
|
cTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGcc < 2:3291771/100‑1 (MQ=255)
gggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCtttt < 1:2815338/100‑1 (MQ=255)
gggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCtttt > 2:2599324/1‑100 (MQ=255)
ggCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCtttttt < 1:2219163/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTg < 1:3225286/100‑1 (MQ=255)
gCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTg > 2:551173/1‑100 (MQ=255)
cATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTg < 1:1679426/99‑1 (MQ=255)
cATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGc < 1:1030585/100‑1 (MQ=255)
tAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCaa > 1:2383898/1‑100 (MQ=255)
tAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCaa > 2:3662306/1‑100 (MQ=255)
tAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCaa > 2:1075012/1‑100 (MQ=255)
aacaacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAg < 2:1853725/100‑1 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCt > 2:2851752/1‑100 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCt > 1:1082441/1‑100 (MQ=255)
caacaacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATGGCAGCGATGCCTTTTTGCAAGCt < 1:834510/100‑1 (MQ=255)
caacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTggg > 2:1334471/1‑100 (MQ=255)
aacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGc < 1:1406839/100‑1 (MQ=255)
aacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGATgg > 1:236166/1‑98 (MQ=255)
aacGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCCAGCTGGGc > 1:2007597/1‑100 (MQ=255)
cGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCaa < 2:1961314/100‑1 (MQ=255)
ccGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAAc < 2:2383904/100‑1 (MQ=255)
ccGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGT‑‑CACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTa < 2:1435954/100‑1 (MQ=255)
ccGGAAAGGCAGGCTCCCTGTAAATATCGATCGGGTTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTATGCAAGCTGGGCa < 1:795834/97‑1 (MQ=255)
cGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACt > 2:208012/1‑100 (MQ=255)
ggAAAGGCAGCCTTCCTGTAAATATCGATCTGGGTAACACAATTACTTTAAAGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTa < 1:3402461/100‑1 (MQ=255)
aaaGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAg < 2:3371301/100‑1 (MQ=255)
aaaGGCAGGCTACCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAg < 1:1291646/100‑1 (MQ=255)
aatgcaggcTTCCTGTAAATATCTATCTGGGTCATACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAg < 1:444035/96‑1 (MQ=255)
aaGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGt > 1:3631222/1‑100 (MQ=255)
ggcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTAt > 1:1762676/1‑100 (MQ=255)
ggcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTAt > 2:98077/1‑100 (MQ=255)
gcaggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATc < 2:2142992/100‑1 (MQ=255)
caggcTCCCTGTAAATATCGATCTGGGTCATACAATTACTTTATCGCTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATc < 1:2880040/99‑1 (MQ=255)
caggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCCATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCt > 1:2734370/1‑100 (MQ=255)
aggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTg > 1:2426674/1‑100 (MQ=255)
ggcTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGa > 2:2067420/1‑100 (MQ=255)
cTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATAGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATc < 1:1982468/95‑1 (MQ=255)
tCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGAccc < 2:2516496/100‑1 (MQ=255)
cccTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCTAGCTGGGCAAACTAAGTATCTGAcccc > 1:526863/1‑100 (MQ=255)
cTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGc < 1:3846744/100‑1 (MQ=255)
tGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCa < 2:3250904/100‑1 (MQ=255)
gTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCAt < 2:3726026/100‑1 (MQ=255)
gTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCAt < 2:4152556/100‑1 (MQ=255)
aaTATCGATCTCGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCgagatcg > 1:3278095/1‑94 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCTCATAAgg < 2:2237557/100‑1 (MQ=255)
atatCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAgg > 1:639021/1‑100 (MQ=255)
atCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTTTTTTTTTTTCTAACTAAGTATCTGACCCCGCATAATGa > 1:1005241/1‑99 (MQ=255)
tCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAAt < 2:2351719/100‑1 (MQ=255)
tCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAAt < 2:3550570/100‑1 (MQ=255)
cGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATa < 1:1101401/100‑1 (MQ=255)
cGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATa > 1:1453650/1‑100 (MQ=255)
cGATCTGGGTCACACAATTACTTTATCGTTGCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATATGACGACGCAtctgg < 1:1846496/96‑5 (MQ=255)
gATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAg > 2:75482/1‑100 (MQ=255)
gATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAg > 1:3836882/1‑100 (MQ=255)
gATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAg > 2:154215/1‑100 (MQ=255)
gATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAg < 2:4128354/100‑1 (MQ=255)
aTCTGGGTCACACAATTACTTTATCGTTTTAGCACCAATTGCAGCCATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGa < 1:2569659/100‑1 (MQ=255)
aTCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGa < 2:1905721/100‑1 (MQ=255)
tCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTAGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGan < 1:315537/100‑2 (MQ=255)
cTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAGGGAATAGAAc < 1:756702/100‑1 (MQ=255)
cTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAAc < 1:3719714/100‑1 (MQ=255)
gTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGc < 2:1446614/100‑1 (MQ=255)
gTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGc < 1:2181146/100‑1 (MQ=255)
tCATACAATTATTTTATCTTTTCATCACCAATTGCAGCGATGATTTTTTGAAAGTTGGGCAAATTAAGTATCTGACCCCGCATAAGGAATAGAATATg < 1:3542854/98‑1 (MQ=255)
tCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCt < 1:3704933/100‑1 (MQ=255)
tCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCt < 2:3143408/100‑1 (MQ=255)
cacaATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCa > 2:1131015/1‑100 (MQ=255)
cacaATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCa > 1:2920220/1‑100 (MQ=255)
cacaATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCGGACCCCGCATAAGGAATACAACATGCTCCa > 1:778118/1‑100 (MQ=255)
caATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATc > 2:3935991/1‑100 (MQ=255)
tttcTTTATTGTTTCAGCATCAATGTCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCcgc < 1:872415/97‑1 (MQ=255)
tACTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCcgcg < 2:65591/100‑1 (MQ=255)
aCTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGa > 2:3539680/1‑100 (MQ=255)
cTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAg < 2:4160014/100‑1 (MQ=255)
cTTTATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAg < 1:2374196/100‑1 (MQ=255)
cTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAg > 1:3748132/1‑100 (MQ=255)
tctATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGc < 2:2201597/98‑1 (MQ=255)
ttATCGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGcc < 2:3061764/100‑1 (MQ=255)
tATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCa > 1:427707/1‑100 (MQ=255)
tATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCa < 2:1423162/100‑1 (MQ=255)
cGTTTCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGaa > 2:4004606/1‑100 (MQ=255)
cGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGaa > 2:1128778/1‑100 (MQ=255)
ttCAGCACCAATTGCAGCGATGCTTTTTTACAAACTGAGCAAACTAAGTATCTGACACCGAATAAGGACTAGCACATGCTCAATctgtggtct > 1:2692440/1‑85 (MQ=255)
ttCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGGAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCa > 1:3810046/1‑100 (MQ=255)
ttCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAAcc < 2:3423771/99‑1 (MQ=255)
ttCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCa < 2:3704128/100‑1 (MQ=255)
ttCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCa > 2:3765295/1‑100 (MQ=255)
tCAGCACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAt > 2:2565242/1‑100 (MQ=255)
cAGCACCAATTGCAGCGATGCCTTTTTTTTTTTTTTTCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtg > 1:4008876/1‑100 (MQ=255)
cACCAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAACCAGAACAAtgttg > 1:1642666/1‑100 (MQ=255)
cACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgttg < 2:639023/100‑1 (MQ=255)
aCCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgttgt > 2:3599065/1‑100 (MQ=255)
aCCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCAtgttgt > 2:350322/1‑100 (MQ=255)
ccAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATgttgtt > 1:2044436/1‑100 (MQ=255)
cAATTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGtta > 2:871214/1‑100 (MQ=255)
aaTTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGttat < 2:169381/100‑1 (MQ=255)
aTTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGttatt > 1:1253771/1‑100 (MQ=255)
aTTGCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGttat < 2:2926102/99‑1 (MQ=255)
gCAGCGATGCTTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATc > 2:338256/1‑100 (MQ=255)
ccTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCccgc > 2:4251233/1‑100 (MQ=255)
|
CTGGGGGCATAACAACAACGCCGGAAAGGCAGGCTCCCTGTAAATATCGATCTGGGTCACACAATTACTTTATCGTTTCAGCACCAATTGCAGCGATGCCTTTTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGC > NC_000913/2509479‑2509676
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
