Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I3 R1 283 58.3 1819865 98.8% 1798026 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,445,200 G→A W363* (TGG→TGA)  tamB → translocation and assembly module for autotransporter export, inner membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,445,2000GA100.0% 214.9 / NA 58W363* (TGG→TGA) tamBtranslocation and assembly module for autotransporter export, inner membrane subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (35/23);  total (35/23)

AGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGG  >  NC_000913/4445052‑4445343
                                                                                                                                                    |                                                                                                                                               
aGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGAcc                                                                                                                                               <  2:497041/151‑1 (MQ=255)
 gCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAACGCGGATTGCCGCTCAACGTGGAAGTGAACAGCGAACAGCTTTACTGACCg                                                                                                                                              >  2:271091/1‑151 (MQ=255)
           ggcggcGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTg                                                                                                                                    <  1:737836/151‑1 (MQ=255)
             cggcgCGCTGCGCGAACAGCTGGAGTTTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGCCTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGATCACTggcg                                                                                                                                    >  2:653535/1‑147 (MQ=255)
               gcgcgcTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGaa                                                                                                                                <  2:426635/151‑1 (MQ=255)
                 gcgcTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGc                                                                                                                              >  1:907510/1‑151 (MQ=255)
                     tGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGt                                                                                                                           >  1:13648/1‑150 (MQ=255)
                      gcgcGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTAt                                                                                                                         >  1:552019/1‑151 (MQ=255)
                         cgAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATc                                                                                                                        >  1:841545/1‑149 (MQ=255)
                                cTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGgatg                                                                                                               >  1:167636/1‑151 (MQ=255)
                                      aTTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATctga                                                                                                         <  2:178673/151‑1 (MQ=255)
                                         ggCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATctgaaa                                                                                                       <  1:155963/150‑1 (MQ=255)
                                               aaTCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATctgaaactgaaa                                                                                                 <  2:302778/150‑1 (MQ=255)
                                               aaTCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCtgaaactgaaac                                                                                                >  1:157998/1‑151 (MQ=255)
                                               aaTCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGAACGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCtgaaactgaaac                                                                                                >  1:776359/1‑151 (MQ=255)
                                                aTCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTgaaactgaaact                                                                                               >  1:415084/1‑151 (MQ=255)
                                                 tCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACtt                                                                                              >  2:652341/1‑151 (MQ=255)
                                                    ttCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACtt                                                                                              <  1:286787/148‑1 (MQ=255)
                                                     tccggtccggTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCg                                                                                          >  2:84633/1‑151 (MQ=255)
                                                     tccggtccggTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCg                                                                                          >  1:899598/1‑151 (MQ=255)
                                                        ggtccggtGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCa                                                                                       <  1:295237/151‑1 (MQ=255)
                                                         gtccggtGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCaa                                                                                      <  1:389153/151‑1 (MQ=255)
                                                             ggtGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATg                                                                                  <  1:117771/151‑1 (MQ=255)
                                                              gtGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATg                                                                                  >  2:855111/1‑150 (MQ=255)
                                                               tGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGAc                                                                                >  1:433764/1‑151 (MQ=255)
                                                                       gATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTac                                                                         >  1:561388/1‑150 (MQ=255)
                                                                               cgcCCAGACGCGACTGGCGGAAGCCGGATTGCCGCCCAACGTGGACGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGccctct                                                                >  2:753682/1‑151 (MQ=255)
                                                                                gcCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGAGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctctc                                                                 >  2:547571/1‑149 (MQ=255)
                                                                                   cAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGc                                                            >  1:810958/1‑151 (MQ=255)
                                                                                     gACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGt                                                          <  1:307558/151‑1 (MQ=255)
                                                                                      aCGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTa                                                         <  2:34541/151‑1 (MQ=255)
                                                                                         cgACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACCGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACgg                                                      >  2:605025/1‑151 (MQ=255)
                                                                                                   aaGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAggg                                            <  2:565527/151‑1 (MQ=255)
                                                                                                      ccGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGAc                                          >  2:571680/1‑150 (MQ=255)
                                                                                                        ggATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCTGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAgg                                       >  1:229830/1‑151 (MQ=255)
                                                                                                        ggATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAgg                                       <  2:586026/151‑1 (MQ=255)
                                                                                                        ggATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAgg                                       <  1:165826/151‑1 (MQ=255)
                                                                                                        ggATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAgg                                       >  1:268878/1‑151 (MQ=255)
                                                                                                         gATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAgg                                       >  1:522931/1‑150 (MQ=255)
                                                                                                             gCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGAt                                   <  1:345653/150‑1 (MQ=255)
                                                                                                               cGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATccc                                >  2:186661/1‑151 (MQ=255)
                                                                                                               cGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATccc                                <  2:338080/151‑1 (MQ=255)
                                                                                                               cGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATccc                                >  1:685254/1‑151 (MQ=255)
                                                                                                               cGCCCAACGTGGACGTGACCAGCCAACAGCTTTACTCACCGTTCACTGGTGAGAAGCAGTATCAGGAGGACGATCTGAAACTGATACTTACCGGCAAATTTACCGATTACCCTCTCTCTATGCGTACTGCAGTGAAGGGACAGGCGATc                                  <  2:130803/149‑1 (MQ=255)
                                                                                                                         ggAAGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACt                      >  1:152578/1‑151 (MQ=255)
                                                                                                                           aaGTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTAt                    >  1:65745/1‑151 (MQ=255)
                                                                                                                             gTGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTa                  <  2:514083/151‑1 (MQ=255)
                                                                                                                              tGAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTAc                 >  2:418822/1‑151 (MQ=255)
                                                                                                                               gAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTAc                 <  1:108581/150‑1 (MQ=255)
                                                                                                                               gAACAGCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTAc                 <  1:716590/150‑1 (MQ=255)
                                                                                                                                    gCAAACAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGa           <  1:602214/151‑1 (MQ=255)
                                                                                                                                         cAGCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGcc       >  2:855348/1‑150 (MQ=255)
                                                                                                                                           gCTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCaa     >  1:693342/1‑150 (MQ=255)
                                                                                                                                            cTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCaa     >  2:186604/1‑149 (MQ=255)
                                                                                                                                            cTTTACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCaa     >  1:6361/1‑149 (MQ=255)
                                                                                                                                             tttACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATcccgcccg                           <  1:243030/126‑1 (MQ=255)
                                                                                                                                             tttACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATcccgcccg                           >  2:243004/1‑126 (MQ=255)
                                                                                                                                             tttACTGACCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAgg  >  1:20882/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
AGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGG  >  NC_000913/4445052‑4445343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A