Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F50 I3 R1
|
9 |
107.1 |
3412234 |
99.5% |
3395172 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,335,317 |
T→G |
Y393S (TAT→TCT) |
murA ← |
UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,335,317 | 0 | T | G | 99.0%
| 413.2
/ NA
| 103 | Y393S (TAT→TCT) | murA | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (48/54); total (49/54) |
| Fisher's exact test for biased strand distribution p-value = 4.76e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 103 total aligned reads displayed.
CACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGATAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCGGCG > NC_000913/3335169‑3335463
|
cacTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGaa < 2:1420593/151‑1 (MQ=255)
acTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGaaa < 1:1449561/151‑1 (MQ=255)
tAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAAt > 1:1671332/1‑150 (MQ=255)
aaaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATAc < 1:1165417/151‑1 (MQ=255)
aaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACg > 1:809028/1‑151 (MQ=255)
aaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACg < 1:138551/151‑1 (MQ=255)
cGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATc > 1:317362/1‑151 (MQ=255)
gAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCCCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACg > 1:1583670/1‑147 (MQ=255)
aaaaaaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCa > 1:1111865/1‑150 (MQ=255)
aaaaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAacc < 2:1343013/151‑1 (MQ=255)
aaaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAacca < 2:1409880/151‑1 (MQ=255)
aaaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAacc > 1:1525456/1‑150 (MQ=255)
aaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAaccac > 1:1254844/1‑151 (MQ=255)
aaTGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAaccac > 2:157197/1‑151 (MQ=255)
gTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACcgtcg > 2:1410414/1‑151 (MQ=255)
gTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACcgtcg < 1:648708/151‑1 (MQ=255)
ggTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACcgtcgt < 2:1623180/150‑1 (MQ=255)
tGGCGGTAGCCCCGCGAAAGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCCCACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCtt > 1:257128/1‑151 (MQ=255)
gCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTcc < 2:1109931/151‑1 (MQ=255)
gCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCACTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCACCCACCGTCGTCCCTTcc < 1:547951/151‑1 (MQ=255)
gCGGGAGACCCGGGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTATCACACGCTCAATAGTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTcc > 1:300400/1‑151 (MQ=255)
tAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCa > 2:1104409/1‑150 (MQ=255)
tAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCa > 2:1409939/1‑150 (MQ=255)
tAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCa > 2:187680/1‑150 (MQ=255)
gCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATa < 2:1237166/151‑1 (MQ=255)
gCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATa < 1:1375524/151‑1 (MQ=255)
ccGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAc > 1:1650146/1‑149 (MQ=255)
cgAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagcc > 1:1567389/1‑150 (MQ=255)
gAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccag < 1:944281/151‑1 (MQ=255)
aaCGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagc > 1:906285/1‑151 (MQ=255)
aaCGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagc < 2:517201/151‑1 (MQ=255)
cGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagcca < 2:1238642/151‑1 (MQ=255)
cGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagcca < 1:685678/151‑1 (MQ=255)
gggCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagccagc < 1:802634/151‑1 (MQ=255)
ggCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATAcagccagccagc > 2:1003370/1‑150 (MQ=255)
gCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCAc > 1:1106457/1‑151 (MQ=255)
gCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAg < 2:749934/151‑1 (MQ=255)
ccAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTTAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAgg < 1:713718/151‑1 (MQ=255)
aGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGc > 1:1616363/1‑150 (MQ=255)
gCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCtt < 1:1453713/151‑1 (MQ=255)
tcAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTg > 2:854081/1‑151 (MQ=255)
aGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGAt < 2:49871/151‑1 (MQ=255)
gACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATg < 1:450743/151‑1 (MQ=255)
gACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATg < 2:250410/151‑1 (MQ=255)
aCGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGc < 1:659169/151‑1 (MQ=255)
gATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCAc < 2:1651955/151‑1 (MQ=255)
ttattCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGc > 1:332485/1‑151 (MQ=255)
tattCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGc > 2:1152035/1‑150 (MQ=255)
tattCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGc > 1:1178602/1‑150 (MQ=255)
cGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGAt < 2:1660163/150‑1 (MQ=255)
cGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATc < 2:1092761/151‑1 (MQ=255)
ccTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGc > 2:761052/1‑144 (MQ=255)
cTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGt > 1:1225704/1‑151 (MQ=255)
tCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTg < 1:967983/150‑1 (MQ=255)
acacGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGcc > 2:916176/1‑150 (MQ=255)
cGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATa < 2:1470616/150‑1 (MQ=255)
cGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATa > 2:1538773/1‑150 (MQ=255)
gCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAAc > 1:1668106/1‑151 (MQ=255)
cAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCtg < 1:129154/151‑1 (MQ=255)
cAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCt < 1:646312/150‑1 (MQ=255)
aaTATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCtg > 2:1035779/1‑150 (MQ=255)
atatTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCtgtg < 1:562314/151‑1 (MQ=255)
atTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTgcg < 2:269532/151‑1 (MQ=255)
gCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAg < 1:1582681/151‑1 (MQ=255)
cACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGa < 1:678535/151‑1 (MQ=255)
ccTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGaaa < 2:133097/151‑1 (MQ=255)
cTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGaa > 1:353552/1‑149 (MQ=255)
tAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGt > 2:954589/1‑151 (MQ=255)
agaGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGtt < 1:417451/149‑1 (MQ=255)
aaaGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAg < 2:70034/149‑1 (MQ=255)
aaaGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTACCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAg < 1:1209148/149‑1 (MQ=255)
cgcgcAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTc > 2:171493/1‑151 (MQ=255)
gcgcAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCa < 1:332037/151‑1 (MQ=255)
aGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAacac > 2:1376513/1‑151 (MQ=255)
ttGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCg < 2:509707/150‑1 (MQ=255)
tGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGt < 2:1090862/150‑1 (MQ=255)
tGTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTg > 2:1462162/1‑151 (MQ=255)
gTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTg < 1:1214887/150‑1 (MQ=255)
gTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGa < 1:953844/151‑1 (MQ=255)
gTCTTCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCACCAGAAAGTTTTTCAACACCGTg < 1:1329887/150‑1 (MQ=255)
tCAATGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACaa > 1:160378/1‑150 (MQ=255)
aaTGCGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATa < 2:1030422/151‑1 (MQ=255)
cGTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACgg > 1:1072462/1‑151 (MQ=255)
gTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACgg > 1:47971/1‑150 (MQ=255)
gTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGt < 1:1156676/151‑1 (MQ=255)
gTTCGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGt < 2:214468/151‑1 (MQ=255)
cGTAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTAt < 1:1269102/150‑1 (MQ=255)
tAGCCACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGc > 2:961918/1‑151 (MQ=255)
cACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTc > 2:1400166/1‑151 (MQ=255)
cACGATCGATGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTc < 2:1222100/151‑1 (MQ=255)
cgatcgatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGa < 2:679381/151‑1 (MQ=255)
atcgatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGAtt > 1:1432571/1‑151 (MQ=255)
cgatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTc < 2:1478802/151‑1 (MQ=255)
cgatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTc > 2:1002529/1‑151 (MQ=255)
cgatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTc > 1:1668628/1‑151 (MQ=255)
gatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCg < 1:1604670/151‑1 (MQ=255)
gatGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCg > 1:621238/1‑151 (MQ=255)
atGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCgg > 2:236672/1‑151 (MQ=255)
atGTGAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCgg < 2:1254889/151‑1 (MQ=255)
tgtgAGAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCGGc > 1:859010/1‑151 (MQ=255)
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CACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACGATTATTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCTTCAATGCGTTCGTAGCCACGATCGATGTGATAAATACGATCAACCACCGTCGTCCCTTCCGCAATACAGCCAGCCAGCACCAGGCTTGCTGATGCACGCAGATCGGTTGCCATAACCTGTGCGCCAGAAAGTTTTTCAACACCGTGACAAATAACGGTATTGCTTTCGATTTCGGCG > NC_000913/3335169‑3335463
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
