Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I1 R1 163 55.0 1534755 98.6% 1513268 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,333,691 A→G pseudogene (712/4605 nt) yfaS ← pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,333,6910AG100.0% 238.8 / NA 63pseudogene (712/4605 nt)yfaSpseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (29/34);  total (29/34)

CTGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCA  >  NC_000913/2333547‑2333834
                                                                                                                                                |                                                                                                                                               
ctGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGt                                                                                                                                             <  2:581047/149‑1 (MQ=255)
ctGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGt                                                                                                                                             <  2:169868/149‑1 (MQ=255)
ctGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGt                                                                                                                                             <  1:765239/149‑1 (MQ=255)
 tGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTccc                                                                                                                                          >  1:302705/1‑151 (MQ=255)
  gAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCg                                                                                                                                         >  1:547689/1‑151 (MQ=255)
   aGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCgg                                                                                                                                        <  1:381684/151‑1 (MQ=255)
       gggCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGctct                                                                                                                                    <  2:585290/151‑1 (MQ=255)
       gggCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGctct                                                                                                                                    <  2:282237/151‑1 (MQ=255)
                  cACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCg                                                                                                                           >  1:120698/1‑149 (MQ=255)
                    cccTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCgag                                                                                                                         >  2:566478/1‑149 (MQ=255)
                          tttttACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAatat                                                                                                                 >  1:122187/1‑151 (MQ=255)
                          tttttACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAata                                                                                                                  <  1:578137/150‑1 (MQ=255)
                            tttACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAAtata                                                                                                                >  1:748630/1‑150 (MQ=255)
                             ttACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATaa                                                                                                               <  2:764028/150‑1 (MQ=255)
                             ttACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATaa                                                                                                               >  1:572987/1‑150 (MQ=255)
                               aCCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATg                                                                                                            >  2:479431/1‑151 (MQ=255)
                                cccGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGt                                                                                                           <  1:680083/151‑1 (MQ=255)
                                 ccGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGtt                                                                                                          <  2:248242/151‑1 (MQ=255)
                                 ccGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGtt                                                                                                          >  1:613444/1‑151 (MQ=255)
                                  cgcgGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTa                                                                                                         <  1:364300/151‑1 (MQ=255)
                                    cgGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGCATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTAcc                                                                                                       >  2:587968/1‑151 (MQ=255)
                                     ggTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTAccc                                                                                                      >  1:530103/1‑151 (MQ=255)
                                      gTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCg                                                                                                     >  1:679716/1‑151 (MQ=255)
                                        ccACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCgg                                                                                                    <  2:461719/150‑1 (MQ=255)
                                           cacCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTgc                                                                                                <  1:382993/151‑1 (MQ=255)
                                             ccAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTgcgg                                                                                              <  2:381158/151‑1 (MQ=255)
                                               aGAAGCTCTTTGCCTGACCCTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTgcggcg                                                                                            <  2:343539/151‑1 (MQ=255)
                                               aGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTgcggcg                                                                                            <  2:105097/151‑1 (MQ=255)
                                                      ctTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGa                                                                                      >  1:451375/1‑150 (MQ=255)
                                                       tttGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGaa                                                                                     >  2:301906/1‑150 (MQ=255)
                                                         tGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAAt                                                                                   <  1:394207/150‑1 (MQ=255)
                                                           ccTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGGGATGAAATTg                                                                                 >  1:676837/1‑150 (MQ=255)
                                                              gACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTgg                                                                             >  1:29392/1‑151 (MQ=255)
                                                               acacTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGa                                                                            <  1:302520/151‑1 (MQ=255)
                                                                cacTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGAt                                                                           <  2:400254/151‑1 (MQ=255)
                                                                   tttGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATgcg                                                                        >  2:699706/1‑151 (MQ=255)
                                                                         aaGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTcc                                                                  >  2:364521/1‑151 (MQ=255)
                                                                         aaGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTc                                                                   <  2:472932/150‑1 (MQ=255)
                                                                             gcCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGtt                                                              <  1:229872/151‑1 (MQ=255)
                                                                               cACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGtttt                                                            >  1:316520/1‑151 (MQ=255)
                                                                                aCGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGtttt                                                            >  1:134978/1‑150 (MQ=255)
                                                                                      tCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCtt                                                     >  1:347506/1‑151 (MQ=255)
                                                                                       cGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCtt                                                     <  2:419000/150‑1 (MQ=255)
                                                                                         gAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgct                                                  >  1:538169/1‑151 (MQ=255)
                                                                                         gAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgct                                                  <  2:535102/151‑1 (MQ=255)
                                                                                          aaacaaacACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgctg                                                 <  1:336562/151‑1 (MQ=255)
                                                                                           aacaaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgctgc                                                <  2:192194/151‑1 (MQ=255)
                                                                                             caaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCgg                                              >  1:369799/1‑151 (MQ=255)
                                                                                               aacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCt                                            <  1:364536/151‑1 (MQ=255)
                                                                                                acacCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTc                                           <  2:357509/151‑1 (MQ=255)
                                                                                                acacCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTc                                           >  2:65218/1‑151 (MQ=255)
                                                                                                          cgtcgCCCGATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGgtt                                  >  2:493363/1‑150 (MQ=255)
                                                                                                                  gATACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCa                         <  2:732356/151‑1 (MQ=255)
                                                                                                                   aTACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCAt                        <  2:49589/151‑1 (MQ=255)
                                                                                                                    tACCCACCAACCATCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCAt                        >  1:372825/1‑150 (MQ=255)
                                                                                                                         accaaccaTCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTgg                   >  1:507489/1‑150 (MQ=255)
                                                                                                                          ccaaccgGCGCCTCGACGAGGTGCATGCCTGGCGTTTGTTGGCCGAGAGGAATATAAATGTTTCCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACGCATTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTg                    <  1:82275/148‑1 (MQ=255)
                                                                                                                          ccaaccaTCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGAt                 <  2:575459/151‑1 (MQ=255)
                                                                                                                           caaccaTCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGCGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGGACGGTTTAGGCTGCCATAGTgggt                 >  2:580485/1‑148 (MQ=255)
                                                                                                                              ccaTCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACg             <  2:393334/151‑1 (MQ=255)
                                                                                                                                aTCGCCTCGACGAGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGa           <  1:289494/151‑1 (MQ=255)
                                                                                                                                        gacgaGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCCTAGTGGATAACGGAACTGttt    >  1:73053/1‑150 (MQ=255)
                                                                                                                                         acgaGGTGCAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCa  <  1:730197/151‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                               
CTGAGCCGGGCTTCGCTTCACCCTGTTTTTTACCCGCGGTCCACACCAGAAGCTCTTTGCCTGACACTTTGCTAAGCGCCACGGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCA  >  NC_000913/2333547‑2333834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A