Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F50 I3 R1 105 107.9 3491495 95.1% 3320411 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,307,916 C→T D244N (GAT→AAT)  clsA ← cardiolipin synthase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,307,9160CT100.0% 364.7 / NA 90D244N (GAT→AAT) clsAcardiolipin synthase 1
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (42/48);  total (42/48)

TGGTGGCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATCGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAG  >  NC_000913/1307770‑1308063
                                                                                                                                                  |                                                                                                                                                   
tggtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGAcc                                                                                                                                                 >  2:951463/1‑151 (MQ=255)
tggtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGAc                                                                                                                                                  <  1:422900/150‑1 (MQ=255)
 ggtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCa                                                                                                                                                <  4:20334/151‑1 (MQ=255)
      cggcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTc                                                                                                                                           >  3:255769/1‑151 (MQ=255)
       ggcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCa                                                                                                                                          <  4:307838/151‑1 (MQ=255)
        gcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCAt                                                                                                                                         <  3:179656/151‑1 (MQ=255)
         cAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCAtg                                                                                                                                        <  4:40094/151‑1 (MQ=255)
           gAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCAtgct                                                                                                                                      <  1:1270239/151‑1 (MQ=255)
               aCGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCg                                                                                                                                  <  1:502443/151‑1 (MQ=255)
               aCGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCg                                                                                                                                  <  1:668979/151‑1 (MQ=255)
               aCGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCg                                                                                                                                  <  2:914241/151‑1 (MQ=255)
               aCGGTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGcc                                                                                                                                   <  2:432098/150‑1 (MQ=255)
                cGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCgg                                                                                                                                 <  1:1246281/151‑1 (MQ=255)
                 gTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGgt                                                                                                                                >  3:230221/1‑151 (MQ=255)
                   tttCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGgtg                                                                                                                               <  1:51495/150‑1 (MQ=255)
                     tCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTa                                                                                                                             <  1:668356/150‑1 (MQ=255)
                     tCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTAc                                                                                                                            >  1:640818/1‑151 (MQ=255)
                       cGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTAcgc                                                                                                                          >  1:374682/1‑151 (MQ=255)
                        ggTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTAcgcg                                                                                                                         <  4:93499/151‑1 (MQ=255)
                         gTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTAcgcg                                                                                                                         >  4:351578/1‑150 (MQ=255)
                           ttCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGAt                                                                                                                       <  2:1138385/150‑1 (MQ=255)
                           ttCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATg                                                                                                                      >  2:33341/1‑151 (MQ=255)
                           ttCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGAGTACGCGa                                                                                                                        >  3:87646/1‑149 (MQ=255)
                              aaTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATg                                                                                                                      <  2:65069/148‑1 (MQ=255)
                              aaTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATg                                                                                                                      >  1:65078/1‑148 (MQ=255)
                              aaTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTaa                                                                                                                   <  1:659035/151‑1 (MQ=255)
                              aaTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTa                                                                                                                    >  1:1027728/1‑150 (MQ=255)
                                  tcCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTAt                                                                                                               >  1:382410/1‑151 (MQ=255)
                                  tcCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTAt                                                                                                               >  2:1278292/1‑151 (MQ=255)
                                   cccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAAtt                                                                                                                 <  1:100772/148‑1 (MQ=255)
                                   cccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAAtt                                                                                                                 <  2:3241/148‑1 (MQ=255)
                                    ccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCg                                                                                                             >  2:792425/1‑151 (MQ=255)
                                     cAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCga                                                                                                            <  2:548258/151‑1 (MQ=255)
                                       gTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCgat                                                                                                           >  3:87954/1‑150 (MQ=255)
                                         cGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCgatcat                                                                                                        <  1:910580/151‑1 (MQ=255)
                                          gCAGGAATAAATAATCCCCAACGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTGTGAAGTAGCGAGGATTGACCATAGTCATGCTGCCGGTGTACGCGATGTAATTATCgataat                                                                                                        <  3:43663/150‑1 (MQ=255)
                                            aGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCgatcatgat                                                                                                     >  1:984556/1‑151 (MQ=255)
                                                ataaataaTCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGatcatc                                                                                                 >  1:345485/1‑151 (MQ=255)
                                                   aataatCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTg                                                                                              <  1:1146563/151‑1 (MQ=255)
                                                         ccccATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTATGCGATGTAATTATCGATCATGATCATCTTGCGATg                                                                                         >  4:449411/1‑150 (MQ=255)
                                                          cccATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGtt                                                                                       >  1:782555/1‑151 (MQ=255)
                                                               cgcgGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGgcgc                                                                                  >  1:638836/1‑151 (MQ=255)
                                                                 cgGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGgcgc                                                                                  >  2:1174060/1‑149 (MQ=255)
                                                                 cgGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCa                                                                                 <  2:1149103/150‑1 (MQ=255)
                                                                 cgGTGGCGATAGGGCCTACCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAg                                                                                <  4:149292/151‑1 (MQ=255)
                                                                   gTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGt                                                                              <  1:937218/151‑1 (MQ=255)
                                                                    tGGCGATAGGGCCTTCCATACGCGCCATCAGATCACTCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTc                                                                             >  2:788089/1‑151 (MQ=255)
                                                                     ggCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTcc                                                                            <  3:209038/151‑1 (MQ=255)
                                                                      gCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCa                                                                           <  1:582495/151‑1 (MQ=255)
                                                                      gCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCa                                                                           <  4:245083/151‑1 (MQ=255)
                                                                         aTAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATAc                                                                        <  2:659335/151‑1 (MQ=255)
                                                                          tAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACg                                                                       >  1:220119/1‑151 (MQ=255)
                                                                               ccTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTa                                                                  <  3:93897/151‑1 (MQ=255)
                                                                                 ttCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTaa                                                                 >  1:428386/1‑150 (MQ=255)
                                                                                       aCGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAacaca                                                          <  4:123726/151‑1 (MQ=255)
                                                                                         gcgcCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACg                                                        >  1:392556/1‑151 (MQ=255)
                                                                                              aTCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATc                                                    >  2:450921/1‑150 (MQ=255)
                                                                                                cAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAg                                                  <  1:1278671/150‑1 (MQ=255)
                                                                                                 aGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATc                                                    >  3:393776/1‑147 (MQ=255)
                                                                                                   aTCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTg                                              >  2:440958/1‑151 (MQ=255)
                                                                                                     cAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGa                                             <  1:270597/150‑1 (MQ=255)
                                                                                                     cAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGAc                                            >  2:347830/1‑151 (MQ=255)
                                                                                                      aaTCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGAcc                                           >  4:54109/1‑151 (MQ=255)
                                                                                                      aaTCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGAcc                                           >  1:613866/1‑151 (MQ=255)
                                                                                                      aaTCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGAcc                                           >  2:161075/1‑151 (MQ=255)
                                                                                                         ccATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCttt                                        <  1:508683/151‑1 (MQ=255)
                                                                                                          cATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCttt                                        >  1:732481/1‑150 (MQ=255)
                                                                                                              gCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGc                                   >  4:174544/1‑151 (MQ=255)
                                                                                                               cccTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCt                                  <  4:204177/151‑1 (MQ=255)
                                                                                                                ccTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCtt                                 <  3:345261/151‑1 (MQ=255)
                                                                                                                ccTACGCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCtt                                 <  1:1210201/151‑1 (MQ=255)
                                                                                                                     gCCCGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGAcc                            >  2:1127662/1‑151 (MQ=255)
                                                                                                                      cccGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGAcc                            >  1:743678/1‑150 (MQ=255)
                                                                                                                      cccGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGAcc                            >  4:189862/1‑150 (MQ=255)
                                                                                                                       ccGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCAc                          <  3:306848/151‑1 (MQ=255)
                                                                                                                        cGCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACt                         <  4:89479/151‑1 (MQ=255)
                                                                                                                         gCATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACtt                        >  2:937885/1‑151 (MQ=255)
                                                                                                                          cATCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTc                       <  1:234446/151‑1 (MQ=255)
                                                                                                                            tCTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCa                      >  3:440528/1‑150 (MQ=255)
                                                                                                                             cTTGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAAt                    >  1:54456/1‑151 (MQ=255)
                                                                                                                               tGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCa                      <  1:634169/147‑1 (MQ=255)
                                                                                                                               tGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAAt                    <  2:1242391/149‑1 (MQ=255)
                                                                                                                               tGTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATAc                  >  2:444019/1‑151 (MQ=255)
                                                                                                                                gTTTGAAGTAGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATAc                  <  1:951650/150‑1 (MQ=255)
                                                                                                                                         aGCGAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTAc         >  4:274080/1‑150 (MQ=255)
                                                                                                                                           tgAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGc       >  2:1207773/2‑150 (MQ=255)
                                                                                                                                            gAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCAt     <  4:37725/151‑1 (MQ=255)
                                                                                                                                            gAGGATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCAt     <  1:6736/151‑1 (MQ=255)
                                                                                                                                              ggATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTa   <  2:683879/151‑1 (MQ=255)
                                                                                                                                               gATTGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAg  <  2:621881/151‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TGGTGGCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATAGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGATCGACCATATTCATGCTGCCGGTGTACGCGATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAG  >  NC_000913/1307770‑1308063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A