Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F50 I2 R1	150	68.2	2132745	98.7%	2105019	150.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	671,974	G→A	D71D (GAC→GAT)	lptE ←	LPS assembly OM complex LptDE, lipoprotein component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	671,974	0	G	A	100.0%	261.0 / NA	67	D71D (GAC→GAT)	lptE	LPS assembly OM complex LptDE, lipoprotein component
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (36/31); total (36/31)

TAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACGTCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACGC  >  NC_000913/671832‑672118

tAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTAcg                                                                                                                                          >  2:775111/1‑151 (MQ=255)

 aaTCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTAcgc                                                                                                                                         <  1:901373/151‑1 (MQ=255)

  aTCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTAcgcg                                                                                                                                        <  2:801214/151‑1 (MQ=255)

       gTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGtt                                                                                                                                   <  2:915972/151‑1 (MQ=255)

           atatCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCtt                                                                                                                               <  1:426544/151‑1 (MQ=255)

               cccGGCCGGGGTTCAACCGGGTGTAATTAGCCGTCATGATCTTCTGATCCTCTGCTG‑TTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCa                                                                                                                          <  2:259901/149‑1 (MQ=255)

                aCGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATc                                                                                                                           >  2:826478/1‑150 (MQ=255)

                aCGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCa                                                                                                                          <  1:217811/151‑1 (MQ=255)

                  ggCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAg                                                                                                                        <  1:180097/151‑1 (MQ=255)

                   gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCa                                                                                                                          >  2:356031/1‑148 (MQ=255)

                   gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGc                                                                                                                       >  1:105256/1‑151 (MQ=255)

                   gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCAATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGc                                                                                                                       >  1:968592/1‑151 (MQ=255)

                    ccGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCa                                                                                                                      <  1:146531/151‑1 (MQ=255)

                     cGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCaa                                                                                                                     <  1:241422/151‑1 (MQ=255)

                      ggggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCa                                                                                                                      <  1:776607/149‑1 (MQ=255)

                        ggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTc                                                                                                                  <  2:484145/151‑1 (MQ=255)

                          aTCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGa                                                                                                                <  1:969072/151‑1 (MQ=255)

                           tCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGac                                                                                                               >  1:246898/1‑151 (MQ=255)

                           tCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGa                                                                                                                >  2:83065/1‑150 (MQ=255)

                              acacGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACAcc                                                                                                            >  1:200350/1‑151 (MQ=255)

                                      gCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGAc                                                                                                    >  2:678742/1‑151 (MQ=255)

                                        aTTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGt                                                                                                  >  1:446305/1‑151 (MQ=255)

                                           aaCCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCATTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAAc                                                                                               <  2:362134/151‑1 (MQ=255)

                                           aaCCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTaa                                                                                                <  2:130493/150‑1 (MQ=255)

                                           aaCCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAAc                                                                                               >  1:547973/1‑151 (MQ=255)

                                            aCCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACt                                                                                              <  2:1000596/151‑1 (MQ=255)

                                                tCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGtt                                                                                          >  2:1007881/1‑151 (MQ=255)

                                                 cATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGtt                                                                                          >  2:74451/1‑150 (MQ=255)

                                                  aTGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCTCTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCTACACCATTCAGACGTAACTGGTTAc                                                                                        <  2:821006/151‑1 (MQ=255)

                                                  aTGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAc                                                                                        <  2:642446/151‑1 (MQ=255)

                                                  aTGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAc                                                                                        >  2:328939/1‑151 (MQ=255)

                                                    gATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAcgc                                                                                      >  2:78849/1‑151 (MQ=255)

                                                     atcatcTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAcgc                                                                                      >  2:750353/1‑150 (MQ=255)

                                                         tcTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAcgcaccgc                                                                                 >  2:970315/1‑151 (MQ=255)

                                                            gATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAcgcaccg                                                                                  <  1:533983/147‑1 (MQ=255)

                                                                ctctGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCtt                                                                          >  2:520496/1‑151 (MQ=255)

                                                                    gctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTa                                                                         <  2:888135/148‑1 (MQ=255)

                                                                    gctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAAt                                                                       <  1:430391/150‑1 (MQ=255)

                                                                     ctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATgg                                                                     >  2:488811/1‑151 (MQ=255)

                                                                      tgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGc                                                                    >  1:845083/1‑151 (MQ=255)

                                                                         ttGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCg                                                                 >  2:997155/1‑151 (MQ=255)

                                                                            aCCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTc                                                              <  2:847832/151‑1 (MQ=255)

                                                                             ccGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCg                                                             <  2:299029/151‑1 (MQ=255)

                                                                                 tACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATc                                                         >  1:664088/1‑151 (MQ=255)

                                                                                           cGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTcc                                               <  1:454182/151‑1 (MQ=255)

                                                                                            gATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCa                                              <  2:815136/151‑1 (MQ=255)

                                                                                             aTGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTcc                                               >  1:959098/1‑149 (MQ=255)

                                                                                             aTGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAg                                             <  1:566842/151‑1 (MQ=255)

                                                                                                cGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGAt                                          >  2:564878/1‑151 (MQ=255)

                                                                                                  gTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATc                                         >  2:136059/1‑150 (MQ=255)

                                                                                                     tCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATg                                      >  1:986978/1‑150 (MQ=255)

                                                                                                          cgcgATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTc                                >  1:445254/1‑151 (MQ=255)

                                                                                                          cgcgATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTc                                >  2:207381/1‑151 (MQ=255)

                                                                                                            cgATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCAt                              >  1:966275/1‑151 (MQ=255)

                                                                                                             gATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGTCACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCTTGAGTCCAGGATCATGACCTTCATa                             <  2:827240/151‑1 (MQ=255)

                                                                                                                  tCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTgg                         >  1:59112/1‑150 (MQ=255)

                                                                                                                   cACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTgga                        >  1:144383/1‑150 (MQ=255)

                                                                                                                   cACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTgg                         <  1:222581/149‑1 (MQ=255)

                                                                                                                       ttACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTggaagg                     <  1:963073/149‑1 (MQ=255)

                                                                                                                          cccAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCt                <  1:613571/151‑1 (MQ=255)

                                                                                                                           ccAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTg               <  1:590476/151‑1 (MQ=255)

                                                                                                                             aaaCGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCg             >  2:325869/1‑151 (MQ=255)

                                                                                                                              aaCGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGt            >  2:799493/1‑151 (MQ=255)

                                                                                                                                cGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTgg          >  2:30579/1‑151 (MQ=255)

                                                                                                                                 gCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGt         >  2:295118/1‑151 (MQ=255)

                                                                                                                                  cAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTa        <  2:1062215/151‑1 (MQ=255)

                                                                                                                                         ggAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACGc  >  2:371521/1‑150 (MQ=255)

TAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACGTCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACGC  >  NC_000913/671832‑672118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A